NO06G02280, NO06G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02280 vs. NCBI_GenBank
Match: EWM26220.1 (peptidyl-prolyl cis-trans isomerase cyclophilin type [Nannochloropsis gaditana]) HSP 1 Score: 364.0 bits (933), Expect = 4.400e-97 Identity = 183/293 (62.46%), Postives = 220/293 (75.09%), Query Frame = 0 Query: 7 LFFLLFRLLLNNFARAQEHGGITDINGTLVKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWADDEYLRREFPKLDYFTDCMVIEASVKREKQEVNEGQDKEHDAQRKEATPTRIAKATASDVH--PDETPERSEGSLLGLWSVLCMVGGMVGFQVLMLVLKGGKSMEKGK 298 LFF L + + AQEH G+T+INGTLVKCHTTAANGAAFI EIK EWAP GAERFLQLV SGYFT+VPFFRVVPGFLTQFGIPP S VRKRWR G+I DDP+QNR ILRGYLSFAG GPNTRD+QLFIALADS+WLGKSPWEVP+GRVIEGMD V+D+LY+GYGEISPFNKEG++Q KIWAD++YLRR+FPKLDY DC +I AS K K + E + + + +R R+ + T + + D+ P +E W +L ++GG+ GF +M L KS+ K + Sbjct: 11 LFFFL------SLSHAQEHRGVTEINGTLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMD-VIDALYAGYGEISPFNKEGVEQYKIWADEDYLRRDFPKLDYMKDCAIIPASAK--KASIQEDRGRREETKRVVVGEERVPEETLNALSNARDKEPAWTEEWPYTWWGLLWVLGGLFGFLTMMWKLNNVKSLGKAR 294
BLAST of NO06G02280 vs. NCBI_GenBank
Match: CBJ29169.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 195.7 bits (496), Expect = 2.100e-46 Identity = 100/203 (49.26%), Postives = 130/203 (64.04%), Query Frame = 0 Query: 34 TLVKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPP--ASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWA-DDEYLRREFPKLDYFTDCMVI-------EASVKREKQEVNEG 227 T V+C TT A+ AF LE+ W+P GAERF+ LV+ YFT+V FR V FL QFGI P +S +K WR G I+DDP S RG LSFAG GPN+R +Q+FI AD LGK+PWE PLG V +GMD V+D Y+GYG+ PFN++GI+QG + + + YLR EFP++ Y +C V+ AS + EKQ+ G Sbjct: 20 TRVQC-TTTASPEAFTLEVYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLGKTPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVVGETVPEEHASARVEKQQEKPG 221
BLAST of NO06G02280 vs. NCBI_GenBank
Match: GBG30862.1 (Peptidyl-prolyl cis-trans isomerase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 154.8 bits (390), Expect = 4.100e-34 Identity = 78/166 (46.99%), Postives = 95/166 (57.23%), Query Frame = 0 Query: 48 FILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTW--LGKSPWEVPLGRV-IEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWADD-EYLRREFPKLDYFTDC 210 F + + WAP+GAERFL LV+ G+F P FR V GFL QFG+ + RW + DDP Q I RG L+FAG G N+R +Q+FIAL D W LG PWE P V E V+ L + YG+I PFNK+G+D GKIW YL FP LDY C Sbjct: 26 FKVVVVPSWAPVGAERFLNLVDEGFFDGAPLFRAVRGFLVQFGLSSDPEANNRWGHL-TLPDDPKQGVRIRRGTLAFAGSGKNSRATQMFIALTDKAWPRLGSEPWETPFAYVPAEDYQAVVSLLNTEYGDIKPFNKQGVDPGKIWRHGMSYLEDGFPNLDYLAYC 190
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OGS37827.1 (peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYA2_FULL_69_6]) HSP 1 Score: 153.3 bits (386), Expect = 1.200e-33 Identity = 81/166 (48.80%), Postives = 109/166 (65.66%), Query Frame = 0 Query: 48 FILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWAD-DEYLRREFPKLDYFTDCMVI 213 F++EI R+WAP GA+RF +LV+SG+F +V FFR + GF+ QFGI V +WR A I DDP RS RG L+FA GP TR +QLFI D+ L + P+G+V EGM V+DSLY GYGE +P + G DQG++ A+ + YL+R+FPKLDY ++ Sbjct: 13 FVIEIHRDWAPRGADRFYELVKSGFFQDVAFFRAIDGFMVQFGIHGDPAVSAKWRGAN-IPDDPASGRSNSRGALTFATAGPGTRTTQLFINFGDNGNLDGMGF-TPIGQVAEGM-SVVDSLYKGYGEGAP-SGMGPDQGRVQAEGNAYLKRDFPKLDYIKSAQLV 174
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OGR53360.1 (peptidylprolyl isomerase [Elusimicrobia bacterium GWA2_62_23]) HSP 1 Score: 151.4 bits (381), Expect = 4.500e-33 Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 0 Query: 36 VKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKI-WADDEYLRREFPKLDY 206 VK TT + F LEI R+W+PLGA+RF LV++GYFT+V FFRV+ GF+ QFGI +V WR IQDDP + +S +GY+S+A GPNTR +QLFI ++ L + P G+V EGMD V++S+YSGYGE +P + G DQG++ + YL+++FPK+DY Sbjct: 20 VKFKTTKGD---FTLEITRDWSPLGADRFYNLVKAGYFTDVAFFRVIEGFMVQFGIHGDPEVSAAWR-GARIQDDPVK-QSNAKGYISYAMAGPNTRTTQLFINYGNNGRLDDMGFS-PFGKVTEGMD-VVESIYSGYGEGAP-SGMGPDQGRVQMQGNAYLKKDFPKMDY 182
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OGR64255.1 (peptidylprolyl isomerase [Elusimicrobia bacterium GWB2_63_22]) HSP 1 Score: 150.6 bits (379), Expect = 7.700e-33 Identity = 82/178 (46.07%), Postives = 113/178 (63.48%), Query Frame = 0 Query: 36 VKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKI-WADDEYLRREFPKLDYFTDCMVI 213 VK TT AF LE+ R W+PLGA+RF LV++GYF ++ FFRV+ GF+ QFGI V WR IQDDP + +S +GY+SFA GPNTR +Q+FI D+ L + P G+V EGMD V++S+YSGYGE +P + G DQG++ + YL+ EFP++DY ++ Sbjct: 20 VKFDTTK---GAFTLEVTRAWSPLGADRFYNLVKNGYFADIAFFRVISGFMVQFGIHGDPAVASAWR-GARIQDDPVK-QSNTKGYISFAMAGPNTRTTQMFINFGDNERLDGMGFS-PFGKVTEGMD-VVESIYSGYGEGAP-SGMGPDQGRVQMQGNAYLKAEFPRMDYIKSAQLL 189
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OIO00514.1 (peptidylprolyl isomerase [Elusimicrobia bacterium CG1_02_56_21] >PJA17007.1 peptidylprolyl isomerase [Elusimicrobia bacterium CG_4_10_14_0_2_um_filter_56_8]) HSP 1 Score: 149.4 bits (376), Expect = 1.700e-32 Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 0 Query: 15 LLNNFARAQEHGGITDINGTLVKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWA-DDEYLRREFPKLDY 206 +LNN A+A E T VK +TT + F LEI R W+PLGA+RF LV++G+FT++ FFRV+ GF+ QFGI V WR IQDDP S +GY+SFA GP TR +Q+FI D+ L + P G+V EGM EV++S+YSGYGE +P + G DQG + + YL+ EFPK+DY Sbjct: 3 ILNNPAKATEKAPET----FKVKFNTTKGD---FTLEITRAWSPLGADRFYNLVKAGFFTDIAFFRVIEGFMVQFGIHGTPAVATAWR-GARIQDDPVV-ESNKKGYISFATAGPGTRTTQMFINFGDNARLDGMGFS-PFGKVSEGM-EVVESIYSGYGEGAPSGR-GPDQGMTQSKGNAYLKAEFPKMDY 182
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OGR39851.1 (peptidylprolyl isomerase [Elusimicrobia bacterium GWA2_64_40] >OGR64124.1 peptidylprolyl isomerase [Elusimicrobia bacterium GWB2_63_16]) HSP 1 Score: 149.1 bits (375), Expect = 2.200e-32 Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = 0 Query: 36 VKCHTTAANGAAFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKI-WADDEYLRREFPKLDYFTDCMVI 213 VK TT + F+LE+ R W+PLGA+RF LV++G+F +V FFRV+ GF+ QFGI +V WR IQDDP + +S +GY+S+A GPNTR +Q FI D+ L + P G+V EGMD V++S+YSGYGE +P + G DQG++ + YL+ +FP LDY ++ Sbjct: 20 VKFATTKGD---FVLEVTRAWSPLGADRFYNLVKAGFFADVAFFRVIEGFMVQFGIHGDPEVASAWR-GARIQDDPVK-QSNAKGYISYAMAGPNTRTTQFFINYGDNARLDDMGFS-PFGKVTEGMD-VVESIYSGYGEGAP-SGNGPDQGRVQMKGNAYLKADFPNLDYIKSAQLL 189
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OLC77220.1 (peptidylprolyl isomerase [Gemmatimonadetes bacterium 13_1_40CM_4_69_8]) HSP 1 Score: 149.1 bits (375), Expect = 2.200e-32 Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 0 Query: 47 AFILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWAD-DEYLRREFPKLDY 206 AF+++++R+WAPLGA+RF LV+SGYF FFRV+PGF+ QFGI V WR A I DDP + + RG +SFA GP TR +QLF+ D++ L + P GRV++GMD V+D LY GYGE +P + G DQG + A + YL R FP+LDY Sbjct: 34 AFVIQVQRDWAPLGADRFYNLVKSGYFAGARFFRVIPGFMAQFGIHGDPPVAAAWREA-TIADDPVRQHN-TRGAVSFATAGPGTRTTQLFVNYGDNSQLDGMGF-APFGRVVDGMD-VVDRLYGGYGEGAPRGR-GPDQGLVQAQGNAYLERAFPQLDY 188
BLAST of NO06G02280 vs. NCBI_GenBank
Match: OGS48617.1 (peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYB2_FULL_62_6]) HSP 1 Score: 148.7 bits (374), Expect = 2.900e-32 Identity = 79/166 (47.59%), Postives = 112/166 (67.47%), Query Frame = 0 Query: 48 FILEIKREWAPLGAERFLQLVESGYFTNVPFFRVVPGFLTQFGIPPASDVRKRWRLAGAIQDDPTQNRSILRGYLSFAGGGPNTRDSQLFIALADSTWLGKSPWEVPLGRVIEGMDEVLDSLYSGYGEISPFNKEGIDQGKIWAD-DEYLRREFPKLDYFTDCMVI 213 F +E+ ++WAPLGA+RF LV++GYFT++ FFRVV GF+ QFGI V +WR A IQDDP + +S +G L++A GP+TR +QLFI ++ +L + P G+V EGM V+DSLYSGYGE +P G DQG+I + + YL+++FPK+DY V+ Sbjct: 29 FTVEVYKDWAPLGADRFYNLVKAGYFTDIAFFRVVSGFMVQFGIHGDPAVSAKWREA-RIQDDPVK-QSNAKGNLTYAMAGPDTRTTQLFINFGNNAFLDSQGFP-PFGKVTEGM-SVVDSLYSGYGEGAP-RGMGPDQGRIQMEGNAYLKKDFPKMDYILSAEVL 189 The following BLAST results are available for this feature:
BLAST of NO06G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02280 ID=NO06G02280|Name=NO06G02280|organism=Nannochloropsis oceanica|type=gene|length=894bpback to top protein sequence of NO06G02280.1 >NO06G02280.1-protein ID=NO06G02280.1-protein|Name=NO06G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
|