NO01G03350, NO01G03350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03350 vs. NCBI_GenBank
Match: EWM29264.1 (septum site-determining protein [Nannochloropsis gaditana]) HSP 1 Score: 522.3 bits (1344), Expect = 1.000e-144 Identity = 259/273 (94.87%), Postives = 270/273 (98.90%), Query Frame = 0 Query: 35 RSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLFS 308 RS+ SDSRV+CITSGKGGVGKTTTAASIGMGLALKGK+TCVIDFDIGLRNLDIHLGAERRVIFDFVHVL GDCTLKQAMIKDKRNPNL+LLAASQTKDKNALTV+ VGKMLAEMRREFDFIICDSPAGIESGA+HAMYFADDAIIVTNPELSSCRDSDKMIGFISS+SKRAELGQEPVRQSLLVTRYDPERA+KEECLRLEDIKELLGLELLGVIPESKCILTATN+GQPVICMPDQDAGQAYMDTVERF+GEEKEFRFLSP+PTGILSMLFS Sbjct: 44 RSVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFS 316
BLAST of NO01G03350 vs. NCBI_GenBank
Match: CBJ31561.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 379.4 bits (973), Expect = 1.100e-101 Identity = 186/282 (65.96%), Postives = 228/282 (80.85%), Query Frame = 0 Query: 27 LASVMTGTRSIGSDSR--VVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 L++V T + G D VV +TSGKGGVGKTTTAAS+ GLA G RTCVIDFDIGLRN+D+HLG ERRVIFDFV+V+ CTL QA+I+D+RNP L LLAASQTKDK ALT EGV +++ E+++ FD+++CDSPAGIESGA+HAMY AD+A+IVTNPE+SSCRDSDKM+GFI+SKS+RAE GQ PVRQ+LLVTRYDP RAE E L L DI+ELLGLE+LG+IPESK +LTATN+GQPVI DA AY D V+RF+G+ + +F+ PKP G+L +F Sbjct: 54 LSTVSTAGGNGGKDGEGCVVVVTSGKGGVGKTTTAASLSYGLAQAGHRTCVIDFDIGLRNMDLHLGCERRVIFDFVNVIQEQCTLNQALIQDRRNPGLSLLAASQTKDKEALTQEGVTRVIRELQKSFDYVVCDSPAGIESGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASKSRRAETGQAPVRQTLLVTRYDPARAESNEMLTLADIQELLGLEVLGLIPESKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFVQPKPAGLLKRMF 335
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETI30974.1 (septum site-determining protein MinD [Phytophthora parasitica P1569]) HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98 Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 Query: 15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 A R SLL LAS M+G++ G RVV ITSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RF+GEE+E +FL P +P G+ +FS Sbjct: 8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_008915169.1 (septum site-determining protein MinD [Phytophthora parasitica INRA-310] >ETK71359.1 septum site-determining protein MinD [Phytophthora parasitica] >ETL24801.1 septum site-determining protein MinD [Phytophthora parasitica] >ETM99548.1 septum site-determining protein MinD [Phytophthora parasitica INRA-310] >ETP00773.1 septum site-determining protein MinD [Phytophthora parasitica CJ01A1] >ETP28924.1 septum site-determining protein MinD [Phytophthora parasitica P10297]) HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98 Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 Query: 15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 A R SLL LAS M+G++ G RVV ITSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RF+GEE+E +FL P +P G+ +FS Sbjct: 8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETL78028.1 (septum site-determining protein MinD [Phytophthora parasitica]) HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98 Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 Query: 15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 A R SLL LAS M+G++ G RVV ITSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RF+GEE+E +FL P +P G+ +FS Sbjct: 8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETM31289.1 (septum site-determining protein MinD [Phytophthora parasitica] >ETO59687.1 septum site-determining protein MinD [Phytophthora parasitica P1976]) HSP 1 Score: 365.5 bits (937), Expect = 1.600e-97 Identity = 186/294 (63.27%), Postives = 230/294 (78.23%), Query Frame = 0 Query: 15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 A R SLL LAS M+G++ G RV+ ITSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RF+GEE+E +FL P +P G+ +FS Sbjct: 8 ARRTSSLLSGGRLASTMSGSKQPG---RVMVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_012751945.1 (hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1] >GAM24856.1 hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1]) HSP 1 Score: 357.1 bits (915), Expect = 5.600e-95 Identity = 170/271 (62.73%), Postives = 221/271 (81.55%), Query Frame = 0 Query: 36 SIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPD-QDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSML 306 ++ D +++ +TSGKGG GKTT+++S GLA KG +TCVIDFDIGLRNLDIH G ERRV+FDF++VL+GDCTL+QA+IKD++NPNLYLLAASQTKDK AL +E V K+L E+R FD+I+CDSPAGIESGA HAMY++D AII TNPELSS RDSDKM+G ++SKSKRA G++P++ +LL+TRY PERAE L ++DI+E LG++L+GV+PES+ ILT TN+G+PVI + D +AY D VERF+G+ K FRF+ PKPTG+ S + Sbjct: 28 TVPHDQKIIVVTSGKGGTGKTTSSSSFSYGLAEKGFKTCVIDFDIGLRNLDIHFGMERRVVFDFINVLNGDCTLRQALIKDRKNPNLYLLAASQTKDKTALKMEAVEKVLDELRESFDYIVCDSPAGIESGAHHAMYWSDQAIICTNPELSSVRDSDKMLGILASKSKRALEGKDPIKLNLLITRYSPERAESGGMLSVKDIQENLGIKLIGVVPESQDILTCTNLGRPVITLDKASDPAEAYRDVVERFLGDPKPFRFIEPKPTGLFSKM 298
BLAST of NO01G03350 vs. NCBI_GenBank
Match: OQR83748.1 (septum site-determining protein minD [Achlya hypogyna]) HSP 1 Score: 356.3 bits (913), Expect = 9.600e-95 Identity = 184/300 (61.33%), Postives = 229/300 (76.33%), Query Frame = 0 Query: 17 RVGSLLQRASLASV--------MTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 R+ S L R S A+ M T +VV +TSGKGGVGKTT +ASIG GLA KG RTC+IDFDIGLRNLDIHLG ERRVIFDF+HV+ G+C L QA+IKDKR L LLAASQT+DK+ALT +GVG++L E++++FDFIICDSPAGIESGA+HAM+FAD+AIIVTNPE+SSCRDSDKMIGFI+SKS RA+ G+ V Q LL+ RYD +R EECL +EDI+E+L L ++GVIPES +L ++N+GQPVI A A+ DTV RF+GEE++F+FL+P K G+ LF+ Sbjct: 7 RIPSALLRQSHATFTAVAGLGNMDATAGGSPQGKVVVVTSGKGGVGKTTCSASIGYGLAQKGFRTCLIDFDIGLRNLDIHLGCERRVIFDFIHVIDGNCRLSQALIKDKRLDKLSLLAASQTRDKDALTEDGVGRVLEELKQDFDFIICDSPAGIESGARHAMFFADEAIIVTNPEISSCRDSDKMIGFIASKSLRAQEGRAKVNQYLLINRYDAKRVSNEECLSVEDIQEMLALPVVGVIPESAQVLNSSNMGQPVIASKTDKAAVAFEDTVARFLGEERDFKFLTPEKSLGLFGRLFN 306
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_002902419.1 (septum site-determining protein minD [Phytophthora infestans T30-4] >EEY56345.1 septum site-determining protein minD [Phytophthora infestans T30-4]) HSP 1 Score: 355.5 bits (911), Expect = 1.600e-94 Identity = 183/297 (61.62%), Postives = 228/297 (76.77%), Query Frame = 0 Query: 17 RVGSLLQRASLA-----SVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPK-PTGILSMLFS 308 R LL R +LA TGT+ G RVV +TSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR L LLAASQT+DK ALT +GV ++L E++ +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RF+GEE+E +FL P+ P G+ +FS Sbjct: 2 RSSLLLTRRTLALSAGRCASTGTKQPG---RVVVVTSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEDGVEEVLDELKSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPEPPKGLFGRIFS 295
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_009524594.1 (hypothetical protein PHYSODRAFT_251466 [Phytophthora sojae] >EGZ21877.1 hypothetical protein PHYSODRAFT_251466 [Phytophthora sojae]) HSP 1 Score: 355.1 bits (910), Expect = 2.100e-94 Identity = 175/267 (65.54%), Postives = 218/267 (81.65%), Query Frame = 0 Query: 42 RVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 RVV ITSGKGGVGKTT AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+I+DKR L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+ PV+Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI ++A A+ D V RF+GEE+E +FL P +P G+ S +FS Sbjct: 15 RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLGQALIRDKRLDKLSLLAASQTRDKEALTEEGVEQVLDELRTQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGRAPVQQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGENAAVAFEDAVARFLGEEREMKFLQPDEPKGLFSRIFS 281 The following BLAST results are available for this feature:
BLAST of NO01G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03350 ID=NO01G03350|Name=NO01G03350|organism=Nannochloropsis oceanica|type=gene|length=1867bpback to top protein sequence of NO01G03350.1 >NO01G03350.1-protein ID=NO01G03350.1-protein|Name=NO01G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bpback to top Synonyms
Publications
|