NO29G01450, NO29G01450 (gene) Nannochloropsis oceanica

Overview
NameNO29G01450
Unique NameNO29G01450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3095
Alignment locationchr29:462376..465470 -

Link to JBrowse

Properties
Property NameValue
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:462376..465470 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01450.1NO29G01450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100357g4gene9062Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01450.1NO29G01450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01450 ID=NO29G01450|Name=NO29G01450|organism=Nannochloropsis oceanica|type=gene|length=3095bp
TGACCACATGCTCTCTTATACTTTTGTGTTGTCTTGTTGAGGGACGTTTG
CAGCTCAATGGCAAGCAAGAAGGGAGGAACAAGGGAGGAACAGAGAGTGT
AACTTACACTCTCTGAAGGCACCGTTGCTCCCTCTCGCAAAAAGGAGCGC
GTCATGTTTGTGGCTCTGGATGGCATTGAACTCCGGCAAAAAGCCACCTC
TGGTACAAGAAAGGAAGGTAAGATTGAAGAACGCCAGCGGCCGCGGCGGC
GGGATACGTGTTCTGCGGTTAAATATATCCGTTGAAATTTTCGCGAAATC
CGATTTCATGGGCCCCCCCCCTGCTGCTCCCCTCTCGCCAAAATTGAATG
TGTTGTATGCTTGGTTTGATGGGCCTCCTTGATTGTTTTTGGTGCTGCCT
TGAGCACCCTACTGCCCGGCCTTCCACGCCAACAGCATGAATACCACACT
CCATGTCACAGGCTTTATGGCCTGCCTTGCCCTGTTGAGGACGGAGGCCT
TTATTCTCAGGTGCTTGCTTACATTCAATCGGCGCTCTTCCCAAGGCTTC
CCCGAATATGAAGTGCAGAAGCCGCCGTAAACGCCCCACACCCTTACCAT
AGCCATCTCTTGGCGCAGCCAGCCAAACCATGACAACCAACACTTTAGGG
CCCGCACCTAGTTGTCCGCTTGCGCGCGTCTTTAACCCCGGCACTATAAA
TATTGTCCAAGCCCCTTCCGCCCTATGGGTGCCCTGCCATGTGGCCCAAA
TGCCTGTGCTGCCGTCCCAAACCATTCCTTGCCTCTAGACAACACTCCTA
CGTCCCACGACAGGCTACATACACGTCATAAAGCATGCGTGCACAATGCC
AATGTGGGCAGCTTAGCGCCGCCCAAGGTTGCACATGGACGGGCGACGCC
CACGCCCCATGAATCCTCCAAATTTAAACTCGGGAACTAAAAGTAGATCC
CTTCCCGCGCACCAATACACCACCACCATACAGAGTATAGCCATCATCAT
CCACCAGCACTATGCATTCTATGAAGTTCAGCTTCGTGTGCTCCCTGGCC
CTGTTTGCTGCCTCAGCCCTGGCCGCCGAGGACGGCGTCTACACTCCTAA
CGACCTGGAGGGTGCCCCGATTACGCTTCCTCCCACCGCCGCCCCCACCA
AATCCGTCTACACCCCTCCTCCGACGCCTGCACCCACCGAGGCCGCCTAC
AATCCCGCCAACAACACTGATGTGGTATTAAATACCACTGAGCCCCCCAC
AGGAGTGCCCACGGGAGTGCCTACAGGAGTCCCCACTCCCTTCCCGACCG
AGAGCCCGACGGGAAGCCCCACCCCTTTCCCTACGGCCAACCCGACTGGT
AGCCCCACGCCTTTCCCGACGGGGCAACCGACGCGAGCCCCCACCCCTGC
GCCTACAGAGAGCCCAACACGAGCCCCCACCCCTGCACCGACGGACAGCC
CGACGCGAGCCCCCACCCCTGCCCCCACCGGTACTCCCACGGCTGCTCCC
ACCGCTACTCCCACAGTAGCCCCCACACCTGCTCCCACGGATGCACCTAC
GAATGCCCCCACTCTGGCACCTACGAATGCACCCACGAATGCCCCTACGA
ATGCCCCCACTCTGGCACCTACGAATGCCCCTACTGAGGCTCCCACGAAT
GCTCCTACTGAGGCTCCCACGAATGCCCCTACTGAGGCGCCCACGAATGC
CCCCACTCTGGCACCTACCAATGCCCCTACTGAGGCTCCCACGAATGCCC
CTACTGAGGCGCCCACTGCGGCTCCCACGAACGCCCCCACGGCAGCCCCC
ACGGCAGCCCCCACGGCAGCCCCCACTGAGGCTCCTACGGCGACTCCCAC
GGCAGCCCCCACGAACGCCCCGACAGCCTTCCCCACGGCCGCCCCCACCA
AGCCTGTGTACACGCCTCCGCCTACATCTGCGCCCACTGAGTCCCCGACA
GCCTTCCCCACGGCCGCCCCGACCAAGCCCGTCTACACTCCTCCTCCTAC
GGCTGCGCCTACGGAGGCTCCGACAGCCGCCCCGACTGAGGCTCCTACGG
CCGCCCCGACCAAGCCCGTCTACACTCCTCCTCCGACGGCCGCGCCCACG
GAGGCCCCCACCTCGGCGCCCACTGAGGCCCCCACGGCTGCACCCACTGA
AGCTCCTACGGCTGCCCCCACGGCGACTCCCACGGCTGCTCCCACGGCCG
CACCCACCTCCGCGCCCACTGAGGCCCCCACGGCTGCTCCCACGGCTGCT
CCCACGGTTGCGCCCACAGAAGCTATCGGTACCTTAGATGCGCCGGAGGA
AAACGTGTACACGCCCCCGCCCTACACCTCCAAGCCCTCCGACCAGGAAG
CGGGCGCCAGCAATGGCCGCCGTCTTCGACGAGGCAGTGCCTAAACAATT
ATTCCCCACCGTCTCGATTGACTAGTTCCCTCTTGCGCCTGTCTCTGGCC
AGGCCTGTAACTAGGTGCCCTATCTATTGAGGCGGCGTGTCTGGAGGAGA
GGTCGAGTGGCGGGTGTTGGAGAGGACTGAGGATATGTGTTTTGGACAGA
TACACGGAAAACTCACGATAGAGTGAGAAAGATTAGGCAAGCAAGAAAAG
GAAGATGTACACGGATTGGAGAGGGAAAGGGACGAAATAGTAAATGGACA
TTAAAACACAACCGGGGCATTGGAGTGATGGACGAAGTAAGTGGGTTAGA
AAAGTTGTGTCACCGGGCTCGGTGGGCTAGATAGTCCTGTTTACTTTTGT
GAGAATGTTCCCCGCGAGGTGTGTGTGTGTGTGAGCAAGGTACAATCCCG
GTTATTATTATAGCTATTACATTTGATTTCACCCCGTGCGACGAGGAATG
ATGACTTGGGAAAGATGTATGCGCTCCGGCAAGACTTAGTTAGGACGCGG
TGGCCATGTTCTATCGATGGACACGATGTGGGACATGGGAGGCCTACTGG
GGAAGCCATAAGTGCAAGCATCAGTCGAAGAAAGTAGAGAAGAAAACAAA
GCAAGGACAGGGGAATGGTGTGATATAGAGTCGTCTTTTGTTCGAAAAGT
ACCAGGTCAGTGAACCAAAGAATCAAAAACGTGACGAATTAAGGA
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protein sequence of NO29G01450.1

>NO29G01450.1-protein ID=NO29G01450.1-protein|Name=NO29G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bp
MHSMKFSFVCSLALFAASALAAEDGVYTPNDLEGAPITLPPTAAPTKSVY
TPPPTPAPTEAAYNPANNTDVVLNTTEPPTGVPTGVPTGVPTPFPTESPT
GSPTPFPTANPTGSPTPFPTGQPTRAPTPAPTESPTRAPTPAPTDSPTRA
PTPAPTGTPTAAPTATPTVAPTPAPTDAPTNAPTLAPTNAPTNAPTNAPT
LAPTNAPTEAPTNAPTEAPTNAPTEAPTNAPTLAPTNAPTEAPTNAPTEA
PTAAPTNAPTAAPTAAPTAAPTEAPTATPTAAPTNAPTAFPTAAPTKPVY
TPPPTSAPTESPTAFPTAAPTKPVYTPPPTAAPTEAPTAAPTEAPTAAPT
KPVYTPPPTAAPTEAPTSAPTEAPTAAPTEAPTAAPTATPTAAPTAAPTS
APTEAPTAAPTAAPTVAPTEAIGTLDAPEENVYTPPPYTSKPSDQEAGAS
NGRRLRRGSA*
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Synonyms
Publications