NO27G00910, NO27G00910 (gene) Nannochloropsis oceanica

Overview
NameNO27G00910
Unique NameNO27G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2356
Alignment locationchr27:308167..310522 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:308167..310522 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR020829GlycerAld_3-P_DH_cat
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR020831GlycerAld/Erythrose_P_DH
Homology
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: EWM21007.1 (glyceraldehyde-3-phosphate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 714.5 bits (1843), Expect = 1.700e-202
Identity = 353/377 (93.63%), Postives = 365/377 (96.82%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPSFKLNAVQHARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHDGVQL 378
            MAPVQSTLIGALALAGS SAFVTPSFKLNAVQHAR NDVHMAVP+GINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGD IIIDG R+ TTHTRKPEEIGWGKLGA+YLCESTGAFLTK+TCQVH+DGGAKKVVMSAPAKDDSQVIVMGVNE DY GA+ILSCASCTTNGLAPIVK++NDEFGIEEALMTTVH+FTATQMVVDGSSKKDWRGGR+ASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVP PDVSVVDLTARLSKPTTYEAICAA+KKASETTHKGV+GYTELPMVSQDFVSD RSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIK VAK DGV L
Sbjct:    1 MAPVQSTLIGALALAGSASAFVTPSFKLNAVQHARTNDVHMAVPMGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDDIIIDGHRIKTTHTRKPEEIGWGKLGASYLCESTGAFLTKDTCQVHLDGGAKKVVMSAPAKDDSQVIVMGVNEVDYKGADILSCASCTTNGLAPIVKVVNDEFGIEEALMTTVHSFTATQMVVDGSSKKDWRGGRAASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPTPDVSVVDLTARLSKPTTYEAICAAIKKASETTHKGVIGYTELPMVSQDFVSDPRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKMVAKQDGVSL 377
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: EWM21008.1 (glyceraldehyde-3-phosphate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 714.5 bits (1843), Expect = 1.700e-202
Identity = 353/377 (93.63%), Postives = 365/377 (96.82%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPSFKLNAVQHARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHDGVQL 378
            MAPVQSTLIGALALAGS SAFVTPSFKLNAVQHAR NDVHMAVP+GINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGD IIIDG R+ TTHTRKPEEIGWGKLGA+YLCESTGAFLTK+TCQVH+DGGAKKVVMSAPAKDDSQVIVMGVNE DY GA+ILSCASCTTNGLAPIVK++NDEFGIEEALMTTVH+FTATQMVVDGSSKKDWRGGR+ASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVP PDVSVVDLTARLSKPTTYEAICAA+KKASETTHKGV+GYTELPMVSQDFVSD RSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIK VAK DGV L
Sbjct:   29 MAPVQSTLIGALALAGSASAFVTPSFKLNAVQHARTNDVHMAVPMGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDDIIIDGHRIKTTHTRKPEEIGWGKLGASYLCESTGAFLTKDTCQVHLDGGAKKVVMSAPAKDDSQVIVMGVNEVDYKGADILSCASCTTNGLAPIVKVVNDEFGIEEALMTTVHSFTATQMVVDGSSKKDWRGGRAASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPTPDVSVVDLTARLSKPTTYEAICAAIKKASETTHKGVIGYTELPMVSQDFVSDPRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKMVAKQDGVSL 405
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: BAH28795.1 (glyceraldehyde-3-phosphate dehydrogenase, partial [Nannochloropsis oculata])

HSP 1 Score: 588.2 bits (1515), Expect = 1.800e-164
Identity = 295/299 (98.66%), Postives = 299/299 (100.00%), Query Frame = 0 
Query:   52 RIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA 351
            RIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTK+TCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNE+DYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGR+ASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAV+KASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA
Sbjct:    1 RIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKDTCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEDDYVGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRAASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVEKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA 299
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: CBJ31240.1 (glyceraldehyde 3-phosphate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 503.1 bits (1294), Expect = 7.800e-139
Identity = 265/379 (69.92%), Postives = 303/379 (79.95%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPS-FKLNAV---QHARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDY-VGANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASET-THKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            MAPV +     LALAGS SAFV PS FK  AV     A +  + MAV  GINGFGRIGRLVAR  VK+P+ NL  INTGA  EYMAYQFKYD+VHG++DG V+V+G  +I+DGQRV T+HTR PEEI +   GA Y+CESTGAFLT+E  Q H+  GAKK+V SAPAKDDS  IVMGVN E Y    +++SCASCTTNGLAP VK+IND FGI+EALMTTVHA TATQMVVDG+SKKDWRGGR+AS NIIPSSTGAAKAVTKVIPSL+GKLTGMAFRVP P+VSVVDLT  L K T+YE ICAA+K+ASE+   KGV+GYTE P+VS DF+SDSRS+IFDAGAGI LNP FVK VAWYDNEWGYS RV+DL+  +A  D
Sbjct:    1 MAPVLNA-AATLALAGSCSAFVAPSAFKGAAVTSKASASSTKLSMAVDTGINGFGRIGRLVARSMVKNPETNLKLINTGAAPEYMAYQFKYDTVHGKYDGTVEVDGMDLILDGQRVPTSHTRNPEEIPFTSTGAEYVCESTGAFLTEEKVQPHLKAGAKKIVFSAPAKDDSHTIVMGVNAETYDPSMDLVSCASCTTNGLAPTVKVINDNFGIKEALMTTVHAMTATQMVVDGTSKKDWRGGRTASANIIPSSTGAAKAVTKVIPSLQGKLTGMAFRVPTPNVSVVDLTCTLDKATSYEEICAAIKEASESGPMKGVIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMATVD 378
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: ABU54833.1 (chloroplast glyceraldehyde-3-phosphate dehydrogenase precursor [Dictyota dichotoma] >ABU96662.1 chloroplast glyceraldehyde-3-phosphate dehydrogenase precursor [Dictyota dichotoma])

HSP 1 Score: 500.4 bits (1287), Expect = 5.000e-138
Identity = 261/377 (69.23%), Postives = 301/377 (79.84%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPS-FKLNAVQHARANDVHMA-VPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASET-THKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            MAPV +  + A+ALAGS SAFV PS FK  AV    A    ++ V  GINGFGRIGRLVAR  +K+P  NL  INTGA  EYMAYQFKYD+VHG+FDG V+V+G  +I+DGQRV T+HTR PEEI +   GA Y+CESTGAFLT+E  Q H+  GAKK+V SAPAKDDS  IVMGVNE+ Y  +  ++SCASCTTNGLAP VK+IND FGI++ALMTTVHA TATQMVVDG+SKKDWRGGR AS NIIPSSTGAAKAVTKVIP+LKGKLTGMAFRVP P+VSVVDLT  L K TTYE IC A+K A+E+   KG+VGYTE P+VS DF+SDSRS+IFDAGAGI LNP FVK+VAWYDNEWGYS RV+DL+  +A  D
Sbjct:    1 MAPVVNA-VAAMALAGSASAFVVPSAFKGTAVNTRAAAPTKLSMVDCGINGFGRIGRLVARSMIKNPDTNLKLINTGAAPEYMAYQFKYDTVHGKFDGSVEVDGMDLILDGQRVPTSHTRNPEEIPFVATGAAYVCESTGAFLTEEKVQPHLAAGAKKIVFSAPAKDDSHTIVMGVNEDSYESSMKLVSCASCTTNGLAPTVKVINDNFGIKDALMTTVHAMTATQMVVDGTSKKDWRGGRCASSNIIPSSTGAAKAVTKVIPALKGKLTGMAFRVPTPNVSVVDLTCTLEKGTTYEEICGAIKDAAESGPMKGIVGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKVVAWYDNEWGYSQRVMDLMCHMAAVD 376
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: ABU96658.1 (chloroplast glyceraldehyde-3-phosphate dehydrogenase precursor [Saccharina latissima])

HSP 1 Score: 493.8 bits (1270), Expect = 4.700e-136
Identity = 257/379 (67.81%), Postives = 298/379 (78.63%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPS----FKLNAVQHARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASET-THKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            MAPV +    A+ALAGS SAFV PS      + +   A +  + MAV  GINGFGRIGRLVAR  VK+P+ NL  INTGA  EYMAYQFKYD+VHG+FDG V+V+G  +I+DGQRV T+HTR PEEI +   GA Y+CESTGAFLT+   Q H+  GAKK+V SAPAKDDS  IVMGVN E YV + +++SCASCTTNGLAP VK+I+D FGI+EALMTTVHA TATQMVVDG+SKKDWRGGR AS NIIPSSTGAAKAVTKVIPSL GKLTGMAFRVP P+VSVVDLT  L K T+YE +CAA+K ASE+   KGV+GY + P+VS DF+SD RS+IFDAGAGI LNP FVK VAWYDNEWGYS RV+DL+  +A  D
Sbjct:    1 MAPVLNA-AAAMALAGSASAFVAPSAFNGAAVTSKSAASSTQLSMAVDTGINGFGRIGRLVARSMVKNPETNLKLINTGAAPEYMAYQFKYDTVHGKFDGTVEVDGMDLILDGQRVPTSHTRNPEEIPFTATGAQYVCESTGAFLTEAAVQPHLKAGAKKIVFSAPAKDDSHTIVMGVNAESYVSSMDLVSCASCTTNGLAPTVKVIDDNFGIKEALMTTVHAMTATQMVVDGTSKKDWRGGRCASSNIIPSSTGAAKAVTKVIPSLLGKLTGMAFRVPTPNVSVVDLTCTLEKGTSYEELCAAIKSASESGPMKGVIGYCDEPLVSTDFISDPRSSIFDAGAGIMLNPNFVKCVAWYDNEWGYSQRVMDLMVHMANVD 378
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: AAQ13415.1 (glyceraldehyde 3-phosphate dehydrogenase precursor [Ascophyllum nodosum])

HSP 1 Score: 489.6 bits (1259), Expect = 8.900e-135
Identity = 258/372 (69.35%), Postives = 294/372 (79.03%), Query Frame = 0 
Query:    1 MAPVQSTLIGALALAGSVSAFVTPS-FKLNAVQHARAND---VHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASET-THKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLI 367
            MAPV +  + A+A AGS SAFV PS F   AV    A     + MA   GINGFGRIGRLVAR  VK+P+ NL  INTGA  EYMAYQFKYD+VHG+F G V+V+G  +I+DGQRV T+HTR PEEI +   GA Y+CESTGAFLT+E  Q H+  GAKK+V SAPAKDDS  IVMGVN E Y  + N++SCASCTTNGLAP VK+IND F I++ALMTTVHA TATQMVVDG+SKKDWRGGR AS NIIPSSTGAAKAVTKVIP LKGKLTGMAFRVP P+VSVVDLT  L K T+YE ICAAVK ASE+    G++GYTE P+VS DF+SDSRS+IFDAGAGI LNP FVK+VAWYDNEWGYS RV+DL+
Sbjct:    1 MAPVINA-VAAMAFAGSASAFVAPSAFNGAAVSTNSATSSTKLSMATDCGINGFGRIGRLVARSMVKNPETNLKLINTGAAPEYMAYQFKYDTVHGKFGGTVEVDGMDLILDGQRVPTSHTRNPEEIPFVATGAEYVCESTGAFLTEEKVQPHLKAGAKKIVFSAPAKDDSHTIVMGVNAETYESSMNLVSCASCTTNGLAPTVKVINDNFVIKDALMTTVHAMTATQMVVDGTSKKDWRGGRCASSNIIPSSTGAAKAVTKVIPQLKGKLTGMAFRVPTPNVSVVDLTCTLEKSTSYEEICAAVKSASESGPMAGIIGYTEEPLVSTDFISDSRSSIFDAGAGIMLNPNFVKVVAWYDNEWGYSQRVMDLM 371
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: EJK66007.1 (hypothetical protein THAOC_13085 [Thalassiosira oceanica])

HSP 1 Score: 475.3 bits (1222), Expect = 1.700e-130
Identity = 241/365 (66.03%), Postives = 285/365 (78.08%), Query Frame = 0 
Query:   11 ALALAGSVSAFVTPSFKLNAVQHARANDVHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            A  L  S SA+      L A   +  + + MA  +G+NGFGRIGRLV RI ++D  C L AIN G A  +YMAYQ+KYD++HG   G V+V+GD ++++G+++ T+  R P+E+GWG LGA Y+CESTG FLTKE+ Q  +DGGAKKV+ SAPAKDDSQ IVMGVN E+Y G+ N +SCASCTTNGLAP+VK I+DEF I+EALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIPSL+GKLTGMAFRVP  DVSVVDLT +L K TTYE ICA +K  SE   KGV+GY + P+VS DF SDSRS+IFDAGAGI LNP FVKLVAWYDNEWGYS RVVDL+K VA  D
Sbjct:    6 AALLVSSASAYSFSGTSLKAA--SNGSSMSMATGMGVNGFGRIGRLVTRIMMEDDDCKLSAINAGSATPDYMAYQYKYDTIHGIAKGTVEVDGDFLVLNGEKIQTSRCRDPKEVGWGALGADYVCESTGVFLTKESAQSILDGGAKKVIYSAPAKDDSQTIVMGVNAEEYDGSENFISCASCTTNGLAPMVKAIHDEFDIQEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPSLQGKLTGMAFRVPTIDVSVVDLTCKLGKETTYEEICAVIKAKSEGEMKGVLGYCDEPLVSTDFESDSRSSIFDAGAGIMLNPSFVKLVAWYDNEWGYSGRVVDLMKHVAAVD 368
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: AFO84289.1 (glyceraldehyde-3-phosphate dehydrogenase [Ditylum brightwellii])

HSP 1 Score: 474.9 bits (1221), Expect = 2.300e-130
Identity = 240/365 (65.75%), Postives = 288/365 (78.90%), Query Frame = 0 
Query:   13 ALAGSVSAFVTPSFKLNAVQHARAND--VHMAVPIGINGFGRIGRLVARIAVKDPQCNLVAINTG-ADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGA-NILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYSCRVVDLIKKVAKHD 374
            AL GS +A+   SF  +A++ + +ND  + MA  +G+NGFGRIGRLV RI ++D +C L  IN G A  +YMAYQ+KYD++HG+  G V+V+GD +++DG+++ T+  R P+E+GWG LGA Y+CESTG FLTKE+ Q  IDGGAKKV+ SAPAKDDS  IVMGVN E Y G+ + +SCASCTTNGLAP+VK I+DEF IEEALMTTVHA TATQ VVD SS+KDWRGGR+AS NIIPSSTGAAKAVTKVIPSL GK+TGMAFRVP  DVSVVDLT R  K TTYE ICA +K  SE   KG +GY++ P+VS DF SDSRS+IFDA AGI LNP FVKL+AWYDNEWGYS RVVDL+K VA  D
Sbjct:   10 ALVGSAAAYSFSSFTGSALKSSASNDASMSMATGMGVNGFGRIGRLVTRIMMEDDECKLSGINAGSATPDYMAYQYKYDTIHGKAKGTVEVDGDFLVLDGKKIQTSRCRDPKEVGWGALGADYVCESTGVFLTKESAQSIIDGGAKKVIYSAPAKDDSLTIVMGVNAEAYDGSEDFISCASCTTNGLAPMVKAIHDEFVIEEALMTTVHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVTKVIPSLVGKITGMAFRVPTIDVSVVDLTCRTEKSTTYEEICAVIKAKSEGEMKGFLGYSDEPLVSTDFESDSRSSIFDADAGIMLNPNFVKLIAWYDNEWGYSGRVVDLMKHVAAVD 374
[Close]
BLAST of NO27G00910 vs. NCBI_GenBank
Match: AAQ63755.1 (glyceraldehyde-3-phosphate dehydrogenase, partial [Mallomonas rasilis])

HSP 1 Score: 473.8 bits (1218), Expect = 5.000e-130
Identity = 231/316 (73.10%), Postives = 264/316 (83.54%), Query Frame = 0 
Query:   45 IGINGFGRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDVEGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHIDGGAKKVVMSAPAKDDSQVIVMGVNEEDYVG-ANILSCASCTTNGLAPIVKIINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTGAAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAVKKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVAWYDNEWGYS 360
            +GINGFGRIGRLVARI V DP+  L AINTGADA YMAYQFKYD+VHG++ G ++VEGD +II+GQR+ T H R P+EIGWGKLG  YLCESTG FLT ++ + H+DGG KKV+ SAPAKD S  IVMGVN++DY      +SCASCTTNGLAP+VK I+D FGIEEALMTTVHA T+TQMVVDGSSKKDWRGGR+AS NIIPSSTGAAKAVT VIPSLKGKLTGMAFRVPVPDVSVVDLT RL++ TTYE IC  VK+ S+   KG++GYT   +VSQDFVS   S++FDA AGI LNP+FVKLVAWYDNEWGYS
Sbjct:    3 VGINGFGRIGRLVARIMVNDPRTTLKAINTGADATYMAYQFKYDTVHGQWKGSLEVEGDDLIINGQRIKTVHARDPKEIGWGKLGVEYLCESTGVFLTADSAKPHVDGGVKKVIFSAPAKDKSPTIVMGVNDKDYTSDMTYVSCASCTTNGLAPMVKAIHDNFGIEEALMTTVHAMTSTQMVVDGSSKKDWRGGRAASANIIPSSTGAAKAVTAVIPSLKGKLTGMAFRVPVPDVSVVDLTCRLARDTTYEEICNKVKELSQGEMKGILGYTNEDLVSQDFVSSPISSVFDAKAGIMLNPRFVKLVAWYDNEWGYS 318
The following BLAST results are available for this feature:
BLAST of NO27G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21007.11.700e-20293.63glyceraldehyde-3-phosphate dehydrogenase [Nannochl... [more]
EWM21008.11.700e-20293.63glyceraldehyde-3-phosphate dehydrogenase [Nannochl... [more]
BAH28795.11.800e-16498.66glyceraldehyde-3-phosphate dehydrogenase, partial ... [more]
CBJ31240.17.800e-13969.92glyceraldehyde 3-phosphate dehydrogenase [Ectocarp... [more]
ABU54833.15.000e-13869.23chloroplast glyceraldehyde-3-phosphate dehydrogena... [more]
ABU96658.14.700e-13667.81chloroplast glyceraldehyde-3-phosphate dehydrogena... [more]
AAQ13415.18.900e-13569.35glyceraldehyde 3-phosphate dehydrogenase precursor... [more]
EJK66007.11.700e-13066.03hypothetical protein THAOC_13085 [Thalassiosira oc... [more]
AFO84289.12.300e-13065.75glyceraldehyde-3-phosphate dehydrogenase [Ditylum ... [more]
AAQ63755.15.000e-13073.10glyceraldehyde-3-phosphate dehydrogenase, partial ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005099NSK005099Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00910.1NO27G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
GapC1gene9420Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00910.1NO27G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00910 ID=NO27G00910|Name=NO27G00910|organism=Nannochloropsis oceanica|type=gene|length=2356bp
TCGCCCTGACTCGGCCAGATCTTGTGTGGCATGCGTGTACTCCCTCATTG
CCTTGGGAGACGTTTGCTTTACATATTTTTAACTTCTAGGCAACAAAAAG
TGACCTCCTCCCTAACACGGCAAACGAGTAGTACCGAGATTCTGGCTCGC
AGCGGATCTTGCAGCCGCAGACTGCAACTTTTTGCCTCTGTTCTTGGTCC
CTGTCTTGTGGCGTGCTTCTTAAAAATAGCCCTGGCTCGTCTCACCTTGT
TGTGCTGCGTGGTCCATCCTTAGCCTAGCACGACCGCACATCTACCTCGC
ACGCCACCCATAACCTACCACAGGCGGTGTTCAAGCCCGTGGCTGCATGC
GTCGTCCCTTCCGCTACCACCCCCGAGCTTGCACACGATGGCGGCTCGCT
CGTGAGTGGCTGGTGCAAGGCGAAAGCAACCACAATATTCTGGCCTTTGC
CATTTTATATTGCCTGGCCTTGACCTTGTAAGCAGCGTCCCCACAGCTTC
CTCCACCAGCACACTGTGTCCCGCATGTGTGGATTGGGGCAGTGGGCAGT
CTTTCTTGTTGTCTTGCACGCCCGCTGGAGGTCAAGTTGGATCAGTATTT
GTACATGCACGGAAGAGAGCGTGACGAGGCGGAGACAAACCGCTCCAAGC
CATCTTCCCATACCAAGCAAACACAACACGTACTCACCCTCCACTCTCCT
TGTCCTTTTTCCCTCTGACACGCGCACCTACAGCACCCCTCGACGACCCT
CACCTGTCTAAATGGCTCCCGTGCAATCCACCCTCATCGGTGCCTTGGCC
CTGGCCGGCTCCGTCTCTGCCTTTGTGACCCCTTCCTTTAAGCTGAACGC
CGTCCAGCACGCGCGTGCCAACGACGTGCACATGGCCGTGCCCATCGGGA
TCAACGGCTTCGGCCGCATCGGTCGCCTTGTTGCCCGTATCGCCGTCAAG
GACCCCCAGTGCAACCTCGTCGCTATCAACACCGGTGCTGATGCCGAGTA
CATGGCGTACCAGTTCAAATACGACTCTGTGCACGGCCGTTTCGACGGCA
AGGTAGACGTGGAGGGTGACACCATCATCATCGACGGCCAGCGTGTCATG
ACCACCCACACCCGCAAGCCCGAGGAGATCGGCTGGGGCAAGCTCGGGGC
GACCTACCTGTGCGAGTCCACGGGCGCTTTCTTGACCAAGGAGACCTGCC
AGGTGCACATTGACGGTGGCGCCAAGAAGGTGGTCATGTCCGCCCCCGCG
AAGGACGACTCCCAGGTCATCGTCATGGGTGTCAACGAGGAGGACTACGT
CGGCGCCAACATCCTCTCTTGCGCGTCCTGCACCACCAACGGCCTGGCCC
CCATCGTCAAGATCATCAACGACGAGTTCGGCATTGAGGAGGCGCTCATG
ACCACGGTGCACGCCTTCACCGCCACCCAGATGGTGGTCGACGGGTCCTC
CAAGAAGGATTGGCGAGGTGGCCGATCGGCCTCCGTGAACATCATCCCTT
CCTCCACCGGTGCCGCCAAGGCTGTAACCAAGGTGATCCCCTCCCTTAAG
GGCAAGCTCACCGGCATGGCCTTCCGTGTCCCCGTCCCCGACGTTTCGGT
CGTGGACCTGACTGCCCGTCTCTCTAAGCCCACCACCTATGAGGCCATCT
GCGCTGCTGTCAAGAAGGCTTCCGAGACCACTCACAAGGGCGTGGTCGGC
TACACTGAGCTTCCCATGGTCAGCCAGGACTTTGTTTCTGACTCCCGCTC
CACTATCTTCGATGCCGGTGCCGGTATTGCGCTCAACCCCCAGTTCGTGA
AGCTCGTGGCTTGGTACGACAACGAGTGGGGATACTCTTGCCGTGTGGTT
GACCTTATCAAGAAGGTCGCCAAGCACGACGGTGTTCAGCTCTAAATCTG
TTAGTTGCAACAGTAGCAGCAACAGCTGTAGTTTTTGTACGCGCAGTGCC
TTGTGCTAGGAGGGAGTAGCAGTAGTAGTAGCAGCAGCAGCAGCAGCGAC
AATTTTATGTGTAAGGCGTGGTCCTTGTGTGCTTTGTGTCTGCTTTGTCT
CTCGTGTGTCAAGAGGCATTCGTAGGGATTGGGATGGGGCTGCCCTTTTT
GATGTTTTCTTCTGCATGTGCAAAATAGTTGTTCTTCTCTTTTTTTTTTC
TTCTTTTCGGGGGAGGAATGGAGGGAGGGAGCGGCACTAGTGCGCGGAGA
ACCCATGTGTGACGTATGCTTTTTGTTTGTGGATGTGGTGAAAATGTAGG
AAGGAGAGGGAGGAGAAATAAATCCGTCACAAACAACAAACTAAAGAGAG
GGGGGGAAGACCAACTTTACGGAAAAAAAATACGTTCACTCCCGAAAAAA
ACCCGT
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protein sequence of NO27G00910.1

>NO27G00910.1-protein ID=NO27G00910.1-protein|Name=NO27G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MAPVQSTLIGALALAGSVSAFVTPSFKLNAVQHARANDVHMAVPIGINGF
GRIGRLVARIAVKDPQCNLVAINTGADAEYMAYQFKYDSVHGRFDGKVDV
EGDTIIIDGQRVMTTHTRKPEEIGWGKLGATYLCESTGAFLTKETCQVHI
DGGAKKVVMSAPAKDDSQVIVMGVNEEDYVGANILSCASCTTNGLAPIVK
IINDEFGIEEALMTTVHAFTATQMVVDGSSKKDWRGGRSASVNIIPSSTG
AAKAVTKVIPSLKGKLTGMAFRVPVPDVSVVDLTARLSKPTTYEAICAAV
KKASETTHKGVVGYTELPMVSQDFVSDSRSTIFDAGAGIALNPQFVKLVA
WYDNEWGYSCRVVDLIKKVAKHDGVQL*
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Synonyms
Publications