NO26G01570, NO26G01570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01570 vs. NCBI_GenBank
Match: CBJ29877.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 246.5 bits (628), Expect = 1.500e-61 Identity = 153/292 (52.40%), Postives = 210/292 (71.92%), Query Frame = 0 Query: 108 STDKEREEYELLNPVSEENEGNLRVGESKLVYNPRTGRFSEKEVEEICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIIS-LGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQ 399 +TD+E+E P E +G+ KL+Y+ R+GRF EK++EE+CREEYC IDE TGKP+LLT EKERIF D IQS+YY+ RQ+L DDDF +LKEDLAWEGSPV +NR+E LF++AM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPKC +D+ ICTVT+ +D +R Y+P I +L S+++I+P+R +NP+ + L L +P + + KF ++ + ++ GPCPSC ++ R+FFG++LGV+ N +EF+C NCG + + R+ LR ++P+ Sbjct: 62 ATDQEKEGVATEEPKDE-------LGDDKLIYDARSGRFYEKKLEEVCREEYCAIDETTGKPMLLTTGEKERIFTDAIQSFYYNQRQMLDDDDFDKLKEDLAWEGSPVVLMNRDEQLFMSAMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEPKCYIDTGICTVTFQEDLFRRFATYLPANFIFGLAFLGASWQIIEPIRYLNPLATLLLLTAPTIAASKKFTDLCLYQDNGTVASGPCPSCGAQNRVFFGSMLGVKGNIDDSEFKCDNCGEIIKIRRADLRARTLPK 346
BLAST of NO26G01570 vs. NCBI_GenBank
Match: CEL96658.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 220.7 bits (561), Expect = 8.700e-54 Identity = 142/247 (57.49%), Postives = 175/247 (70.85%), Query Frame = 0 Query: 152 EEICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQ 399 EE REE+ R+D G PV LT EKER+FLD +QSYY SGRQ LTD DF LK+DLAWEGS V +L RNETLFLNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PKC VD+ +C VT+ KD R ++Y+P + + LW ++E I LRSVNP ++L +GSP+++ +K TEN+F +PLI+ GPCP+C + RI FG +LGVE +A+ C NCGA L R SLR S P+ Sbjct: 56 EEEDREEFVRLD-NCGNPVKLTTAEKERVFLDALQSYYSSGRQALTDGDFDLLKQDLAWEGSDVIFLTRNETLFLNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTSDPKCAVDTGVCRVTWKKDRIRNYMVYLPWLAVSTVLWSFLAFEFIPVLRSVNPFLNLLIGSPIIWTLAKAGTENLFLRDPLIAYGPCPNCGYQNRILFGDVLGVEGFGASADIVCANCGASLRAQRQSLRVESNPK 301
BLAST of NO26G01570 vs. NCBI_GenBank
Match: GAX13593.1 (hypothetical protein FisN_3Lh163 [Fistulifera solaris]) HSP 1 Score: 218.4 bits (555), Expect = 4.300e-53 Identity = 143/296 (48.31%), Postives = 197/296 (66.55%), Query Frame = 0 Query: 104 GAQESTDKEREEYELLNPVSEENEGNLRVGESKLVYNPRTGRFSEK---EVEEICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSI 397 G + D + E + E+++ V +L ++ ++GRF E E + I EE+C +D+ +G PV LTV+EKERIFLD +QSYY SGRQ+L+D DF +LKEDL W GSP+ +N+ E ++ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPKC +D+ IC VT+ +D +R +LY+P LI WL SYELI PL ++NP+I +G P +Y SK +TEN+ F + + GPCP+C+ E R++FG ILGVE A+ +C NC E +L ++++R +I Sbjct: 36 GRLTAKDDKAESFFTEEKEEEKSKFITSVFNKELAFDQKSGRFFETGFGEGDCIPDEEFCMVDDASGTPVRLTVEEKERIFLDALQSYYVSGRQMLSDADFDRLKEDLEWNGSPLVAMNQKEVRYMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTEPKCYIDTGICKVTFQQDKFRNNLLYLPAGLILFLAWLFFSYELINPLIAINPVILATVGLPFIYSGSKAVTENLIFVDNKVLYGPCPNCSFENRVYFGNILGVEGFTDVAKCKCPNCKTEFSLLKNTMRASTI 331
BLAST of NO26G01570 vs. NCBI_GenBank
Match: XP_002177079.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51542.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 217.2 bits (552), Expect = 9.600e-53 Identity = 135/294 (45.92%), Postives = 194/294 (65.99%), Query Frame = 0 Query: 108 STDKEREEYELLNPVSEENEGNLRVGESKLVYNPRTGRFSEKEVEE---ICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQ 399 S +KE+E+ L+ ++ + ++ GRF E ++ + I EE+C D +G + LT++EKERIFLD +QSYY SGR++L+DD+F LKEDL W GSP+ +NR E +LNAM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPKC +D+ IC VT +D +R +LY+P +IG+ W+ +E+++P +NP++ +G+P++Y ++ LTE F ++ GPCPSC +E R++FG ILGVE A +C NC T+ R++LR ++P+ Sbjct: 42 SEEKEKEDLTLVPSARKQ-----------IAFDEAKGRFFETDISDADCIPDEEFCITDNDSGSMIRLTIEEKERIFLDALQSYYNSGRKMLSDDEFDLLKEDLTWNGSPMVVMNRKEAAYLNAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPKCYIDTGICKVTLQEDKFRSNLLYLPATVIGVVAWIGFGFEVLEPFIRINPVVLTLMGTPLIYLGARTLTEEFIFENKFLAYGPCPSCQAENRVYFGNILGVEGFTDVANAKCPNCKTTFTVQRNTLRASTLPK 324
BLAST of NO26G01570 vs. NCBI_GenBank
Match: GAX15689.1 (hypothetical protein FisN_3Hh163 [Fistulifera solaris]) HSP 1 Score: 215.3 bits (547), Expect = 3.700e-52 Identity = 138/291 (47.42%), Postives = 195/291 (67.01%), Query Frame = 0 Query: 109 TDKEREEYELLNPVSEENEGNLRVGESKLVYNPRTGRFSEK---EVEEICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSI 397 T K+ + E+++ V +L ++ ++GRF E E + + EE+C +D+ +G PV LTV+EKERIFLD +QSYY SGRQ+L+D +F +LKEDL W GSP+ +N+ E ++ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPKC +D+ IC VT+ +D +R +LY+P LI WL SYELI PL ++NP+I +G P +Y SK +TEN+ F + + GPCP+C+ E R++FG ILGV+ A+ +C NC E ++ ++++R +I Sbjct: 39 TAKDDKAESFFTEEEEKSKFITSVFNKELAFDQKSGRFFETGFGEGDCVPEEEFCMVDDASGTPVRLTVEEKERIFLDALQSYYVSGRQMLSDAEFDRLKEDLEWNGSPLVAMNQKEVRYMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTEPKCYIDTGICKVTFQQDKFRNNLLYLPAGLILFLTWLFFSYELINPLIAINPVILATVGLPFIYSGSKAVTENLIFTDNKVLYGPCPNCSFENRVYFGNILGVDGFTDVAKCKCPNCRTEFSVLKNTMRASTI 329
BLAST of NO26G01570 vs. NCBI_GenBank
Match: OEU18748.1 (hypothetical protein FRACYDRAFT_182880 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 210.7 bits (535), Expect = 9.000e-51 Identity = 138/266 (51.88%), Postives = 180/266 (67.67%), Query Frame = 0 Query: 136 KLVYNPRTGRFSEKEVEE---ICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQ 399 +L ++ TGRF E +E+ I EEYC +DE +G + LTV EKERIFLD IQSYY SGRQLL+D+DF LKEDL W GSPV ++R E+ FL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PKC +D+ +C VT KD +R +LY+P I +WL +E+I+P+ +NPII LG+P++ + +TE+ F L++ GPCPSC E R++FG +LGVE +C NC T+ R SLR ++P+ Sbjct: 19 ELKFDDTTGRFFETGIEKEECIPDEEYCMVDEDSGNKIRLTVAEKERIFLDSIQSYYASGRQLLSDEDFDLLKEDLQWNGSPVVVVSREESKFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDPKCYIDTGVCKVTLQKDKFRSNLLYLPAGAILSIVWLALGFEIIEPIIRLNPIILFALGTPLITKGATVITEDYLFVNNLVAYGPCPSCEYENRLYFGDMLGVEGFGAEGNVKCPNCKTVFTVQRESLRASTLPK 284
BLAST of NO26G01570 vs. NCBI_GenBank
Match: XP_002289386.1 (hypothetical protein THAPSDRAFT_268713 [Thalassiosira pseudonana CCMP1335] >EED92923.1 hypothetical protein THAPSDRAFT_268713 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 209.5 bits (532), Expect = 2.000e-50 Identity = 136/269 (50.56%), Postives = 182/269 (67.66%), Query Frame = 0 Query: 133 GESKLVYNPRTGRFSEKEVE-EIC--REEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQ 399 G +L Y+ TGRF E +++ E C +EYC +D+ +G+ V LT++EKERIFLD +QSYY+SGRQ+L D +F LKEDL+W GSPV LNR E +L A+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX +EPKC +D+ ICTVTY D +R +LY+P I WL +E+I+P+ +NP+I +G+P +Y S LT++ F I GPCP C +E R++FG ILGVE A +C C A + + R +LR ++P+ Sbjct: 57 GRKELSYDSATGRFFETDLDPEDCVPDDEYCVVDKASGELVRLTIEEKERIFLDALQSYYFSGRQVLNDAEFDLLKEDLSWNGSPVVNLNRKEAKYLAAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSKEPKCYIDTGICTVTYQNDNFRNNLLYLPVGAILAIGWLGFGFEVIEPIVRLNPLILAAIGAPFIYNGSISLTDSFIFPNNKIVYGPCPVCETETRVYFGDILGVEGFSDVAGVKCSKCKAAINVQRRTLRASTLPK 325
BLAST of NO26G01570 vs. NCBI_GenBank
Match: EJK57224.1 (hypothetical protein THAOC_22761 [Thalassiosira oceanica]) HSP 1 Score: 204.1 bits (518), Expect = 8.500e-49 Identity = 120/258 (46.51%), Postives = 168/258 (65.12%), Query Frame = 0 Query: 145 RFSEKEVEE---ICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQT 400 RF E +E I +EE+C ID + +P+ LTV+EKER+FLD +QSYY SGRQ++ D +F LKEDL W GS + LNR E +L AM XXXXXXXXXXXXXXXXXX +EP C +++ ICT+ + KD +R ++Y+P I +WL GS LI L +NP+++L +GSPV+Y A++ +T+N F LI+ GPCP+C +R++FG ILGVE A +CK+C E+ + R SLR ++P++ Sbjct: 65 RFYETGIEGDDCIPKEEFCVIDPENDEPIRLTVEEKERMFLDALQSYYVSGRQIMDDAEFDALKEDLMWNGSELVNLNRREIAYLEAMQGFNXXXXXXXXXXXXXXXXXXRDAKSVVAVEKEPTCYIETGICTIEWKKDNFRNNLIYLPAAAIMTFIWL-GSSALIVGLNQLNPLLTLIVGSPVIYIAAQAITDNFIFANNLIAYGPCPNCEYPERVYFGNILGVEGFDNQAAKKCKSCKEEILVQRRSLRAATLPKS 321
BLAST of NO26G01570 vs. NCBI_GenBank
Match: EJK45793.1 (hypothetical protein THAOC_35578 [Thalassiosira oceanica]) HSP 1 Score: 200.7 bits (509), Expect = 9.300e-48 Identity = 128/233 (54.94%), Postives = 167/233 (71.67%), Query Frame = 0 Query: 139 YNPRTGRFSEKEVEE---ICREEYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIP-GVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVE 368 Y+ + GRF E ++ I EEYC +D++TG + LT++EKERIF+D +QSYY SGRQLL D +F LKEDLAW+GS + +NR ET +L A+ XXXXXXXXXXXXXXXXXXXXXXXXXX +EPKC +DS ICTVT+ D +R +LY+P G ++G+ LWL +E++ PL +NP+I LGSP+V SK++T+ F + I GPCPSC +E RI+FG ILGVE Sbjct: 448 YDEQAGRFFETNIDPEDCIPDEEYCIVDKETGNYIRLTLEEKERIFMDALQSYYVSGRQLLNDAEFDMLKEDLAWQGSSLVNMNRQETKYLAAVQXXXXXXXXXXXXXXXXXXXXXXXXXXAFASSKEPKCYIDSGICTVTFEDDKFRNNLLYLPAGAILGI-LWLGLGFEVLGPLVRLNPLILAALGSPLVINGSKYITDTFIFQDNQIGYGPCPSCGTEMRIYFGNILGVE 679
BLAST of NO26G01570 vs. NCBI_GenBank
Match: OSX71859.1 (hypothetical protein BU14_0493s0004 [Porphyra umbilicalis]) HSP 1 Score: 176.4 bits (446), Expect = 1.900e-40 Identity = 120/245 (48.98%), Postives = 165/245 (67.35%), Query Frame = 0 Query: 158 EYCRIDEKTGKPVLLTVKEKERIFLDCIQSYYYSGRQLLTDDDFSQLKEDLAWEGSPVAYLNRNETLFLNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPKCLVDSNICTVTYTKDPWRLGVLYIPGVLIGLTLWLVGSYELIQPLRSVNPIISLGLGSPVVYFASKFLTENVFFNEPLISVGPCPSCNSEQRIFFGTILGVESNQKTAEFECKNCGAELTLTRSSLRCVSIPQTPEE 403 ++C +D +TGK V ++V EKE +FL + +Y+ LL+D +F LKE+L W+GS V L+R+E FL+A XXXXXXXXXXXXXXXXXXXXXXXXXXXX R P+C ++ I D R+ VLY+P ++G LWL GSYEL PLR+V+P++SL LG+P+++ S+ LT+ V PLI VG CPSC + R FFG +L V+ Q AE +C+ CGA+L + + SLR V + + E+ Sbjct: 77 DFCSVDSRTGKRVEMSVPEKETLFLSAMNAYFNKEPALLSDSEFDALKEELTWQGSDVVTLSRDEFRFLDAAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARGPRCSIERQITFSEVIPDTKRIFVLYLPAAIVGALLWLSGSYEL-TPLRNVDPVLSLLLGTPLIFLFSRTLTQLV-VPSPLILVGDCPSCGRQTRTFFGKVLTVDGFQADAEIKCQKCGAKLKVEKDSLRMVLLQEGKEK 319 The following BLAST results are available for this feature:
BLAST of NO26G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01570 ID=NO26G01570|Name=NO26G01570|organism=Nannochloropsis oceanica|type=gene|length=3920bpback to top protein sequence of NO26G01570.2 >NO26G01570.2-protein ID=NO26G01570.2-protein|Name=NO26G01570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=429bpback to top protein sequence of NO26G01570.1 >NO26G01570.1-protein ID=NO26G01570.1-protein|Name=NO26G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
|