NO26G00910, NO26G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00910 vs. NCBI_GenBank
Match: EWM23125.1 (ribosome biogenesis protein rlp24 [Nannochloropsis gaditana]) HSP 1 Score: 287.0 bits (733), Expect = 4.400e-74 Identity = 140/150 (93.33%), Postives = 149/150 (99.33%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAASREKALLNVRE 151 MRI+KCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRP+KYDR+LVGKT+QAM K+R+IQSRREEVFYQTRMREAKMKEKAALQVEV+E++ELLAPAAASREKALLNVRE Sbjct: 77 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKALLNVRE 226
BLAST of NO26G00910 vs. NCBI_GenBank
Match: OEU17510.1 (60S ribosomal protein L24 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 216.9 bits (551), Expect = 5.600e-53 Identity = 112/181 (61.88%), Postives = 133/181 (73.48%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAASREKALLNVREKVKERHAVR-------------AAARGGGDG 169 MRI KCYFCS P YPGHG TFVRND+K F FCRSKCHRNFNKKRNPRK WTKAYRK GKEM VD+TFDFEKRRNRP+KYDR+L+GKTI AM ++ +I+ REE F++ RM +AK ++K +VE+ +SIELLAPA A+RE+ + NV + K R A R AAA GGDG Sbjct: 1 MRIEKCYFCSSPCYPGHGMTFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMKRVETIKKAREERFFENRMSDAKAEKKKQARVEIEKSIELLAPAVANREQVMRNVIDSAKLRIAARKKSSGTRLTNTPSAAAAVGGDG 181
BLAST of NO26G00910 vs. NCBI_GenBank
Match: XP_002289527.1 (RL30, ribosomal protein 30 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335] >EED93064.1 RL30, ribosomal protein 30 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 211.5 bits (537), Expect = 2.300e-51 Identity = 106/174 (60.92%), Postives = 128/174 (73.56%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAASREKALLNVREKVKERHAVR-------AAARGGGD 168 MRI KCYFCS P YPGHG FVRND+K F FCRSKCHRNFNKKRNPRK WTKAYRK GKE+ VD+TF+FEKRRNRP+KYDR L+GKTI AM +++SI+ RREE F+ RMR+AK ++ +VE+ + +ELLAPA A RE+ L NV + + R A R ARG G+ Sbjct: 1 MRIEKCYFCSSPCYPGHGIMFVRNDSKTFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKELAVDSTFEFEKRRNRPVKYDRNLMGKTIMAMQRVQSIKERREERFHANRMRDAKPEKVKQARVEIEKHVELLAPAVAKREEVLQNVLDSARARIATRKIKAGENVKARGSGE 174
BLAST of NO26G00910 vs. NCBI_GenBank
Match: EJK74723.1 (hypothetical protein THAOC_03583 [Thalassiosira oceanica]) HSP 1 Score: 208.8 bits (530), Expect = 1.500e-50 Identity = 99/163 (60.74%), Postives = 126/163 (77.30%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAASREKALLNVREKVKERHAVRAAAR 164 MRI KCYFCS P YPGHG FVRND+K F FCRSKCHRNFNKKRNPRK WTKAYR+ GKE+ VD+ F+FEKRRNRP+KYDR L+GKTI AM +++SI+ RREE F+ RM++AK ++ + +VE+ + IE++APA A+RE+ L NV + +ER A R + Sbjct: 1 MRIEKCYFCSSPCYPGHGIVFVRNDSKSFRFCRSKCHRNFNKKRNPRKVAWTKAYRRTRGKELAVDSAFEFEKRRNRPVKYDRNLMGKTIMAMQRVQSIKERREERFHANRMQDAKAEKISQARVEIEKHIEVIAPAVANREEVLANVLDSARERIATRRVVK 163
BLAST of NO26G00910 vs. NCBI_GenBank
Match: XP_005852610.1 (ribosome biogenesis protein rlp24 [Nannochloropsis gaditana CCMP526] >EKU23222.1 ribosome biogenesis protein rlp24 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 196.4 bits (498), Expect = 7.800e-47 Identity = 105/150 (70.00%), Postives = 114/150 (76.00%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAASREKALLNVRE 151 MRI+KCYFCSGPMYPGHGTTFVRNDAK MVVDATFDFEKRRNRP+KYDR+LVGKT+QAM K+R+IQSRREEVFYQTRMREAKMKEKAALQVEV+E++ELLAPAAASREKALLNVRE Sbjct: 1 MRILKCYFCSGPMYPGHGTTFVRNDAK-----------------------------------MVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKALLNVRE 115
BLAST of NO26G00910 vs. NCBI_GenBank
Match: OQS05182.1 (ribosome biogenesis protein RLP24 [Thraustotheca clavata]) HSP 1 Score: 193.7 bits (491), Expect = 5.100e-46 Identity = 91/159 (57.23%), Postives = 121/159 (76.10%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAP-AAASREKALLNVREKVKERHAV 159 MRI CYFCS P+YPGHG FVRND+KVF FCRSKCHRNFN+KRNPRK +WTKA+RKAAGKEM +D TFDFEK RNR +KYDR+LVG T+ AM +++ I+ +RE FY+ RM++ K K+K E++++I L+ P A++E+A LN + ++ + V Sbjct: 1 MRIYTCYFCSSPVYPGHGMAFVRNDSKVFRFCRSKCHRNFNRKRNPRKVKWTKAFRKAAGKEMALDTTFDFEKIRNRAVKYDRDLVGATLHAMARVQQIKEKREAAFYKNRMKDVKAKQKVRDLAEIQQNISLVKPDVVAAKEQAQLNAHDMERQTNVV 159
BLAST of NO26G00910 vs. NCBI_GenBank
Match: OWZ19558.1 (Ribosome biogenesis protein RLP24 [Phytophthora megakarya]) HSP 1 Score: 193.0 bits (489), Expect = 8.600e-46 Identity = 93/161 (57.76%), Postives = 126/161 (78.26%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAAS-REKALLNVREKVKERHAVRA 161 MRI CYFCS P+YPGHG TFVRND+K+F FCRSKCH+NFN+KRNPRK +WTKA+RKAAGKEM +D TFDF+K+R+R +KYDREL+G TI A+ ++ I+ +RE FY+ RM+++K+KEKA E+ ++I L+ PAAA+ +++A LNV ++ A A Sbjct: 1 MRIHTCYFCSSPVYPGHGITFVRNDSKIFRFCRSKCHKNFNRKRNPRKVKWTKAFRKAAGKEMALDTTFDFDKQRHRAVKYDRELMGATIHAIERVTQIKEKREAQFYKNRMKDSKVKEKARDLRELEQNITLIEPAAAALKDQAQLNVNAAKQKAAATEA 161
BLAST of NO26G00910 vs. NCBI_GenBank
Match: GAY01773.1 (ABC transporter E family member 2 [Pythium insidiosum]) HSP 1 Score: 193.0 bits (489), Expect = 8.600e-46 Identity = 94/160 (58.75%), Postives = 125/160 (78.12%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAAS-REKALLNVREKVKERHAVR 160 M+I CYFCSGP+YPGHG TFVRND+K+F FCRSKCH+NFN+KRNPRK RWTKA+RKAAGKEM +D TFDFEK+RNR +K DREL+G TI A+ +++ I+ +RE+ F++ RM+ K +K E+++ I L+ PAAA+ +EKA LNV KE++A + Sbjct: 381 MKIYTCYFCSGPVYPGHGITFVRNDSKIFRFCRSKCHKNFNRKRNPRKVRWTKAFRKAAGKEMALDTTFDFEKQRNRAVKXDRELMGATIHAIERVQQIKEKREQQFFKNRMKNNKAMQKERDLKEIQQHISLIQPAAAALKEKAQLNVASS-KEKNATQ 539
BLAST of NO26G00910 vs. NCBI_GenBank
Match: XP_008618481.1 (50S ribosomal protein L24e [Saprolegnia diclina VS20] >XP_012205037.1 hypothetical protein SPRG_09902 [Saprolegnia parasitica CBS 223.65] >EQC28056.1 50S ribosomal protein L24e [Saprolegnia diclina VS20] >KDO24266.1 hypothetical protein SPRG_09902 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 192.6 bits (488), Expect = 1.100e-45 Identity = 95/169 (56.21%), Postives = 125/169 (73.96%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAA-SREKALLNVREKVKERHAVRAAARGGGDG 169 MRI CYFCS P+YPGHG FVRND+KVF FCRSKCHRNFN+KRNPRK +WTKA+RKAAGKEM +D TFDFEK RNR +KYDR+LVG T+ AM +++ I+ +RE FY+ RM+++K K+KA E+ ++I L+ P ++E+A LN + + +AV GG +G Sbjct: 1 MRIHTCYFCSSPVYPGHGMAFVRNDSKVFRFCRSKCHRNFNRKRNPRKVKWTKAFRKAAGKEMALDTTFDFEKIRNRAVKYDRDLVGATLHAMARVQQIKEKREAAFYKNRMKDSKAKQKARDVAEIEQNISLIKPEIVFAKERAQLNAADNERVTNAV-----GGDEG 164
BLAST of NO26G00910 vs. NCBI_GenBank
Match: XP_002997209.1 (ribosome biogenesis protein RLP24 [Phytophthora infestans T30-4] >XP_002909877.1 ribosome biogenesis protein RLP24 [Phytophthora infestans T30-4] >EEY59297.1 ribosome biogenesis protein RLP24 [Phytophthora infestans T30-4] >EEY69571.1 ribosome biogenesis protein RLP24 [Phytophthora infestans T30-4]) HSP 1 Score: 192.6 bits (488), Expect = 1.100e-45 Identity = 95/163 (58.28%), Postives = 127/163 (77.91%), Query Frame = 0 Query: 1 MRIVKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPIKYDRELVGKTIQAMHKLRSIQSRREEVFYQTRMREAKMKEKAALQVEVRESIELLAPAAAS-REKALLNVREKVKERHAVRAAA 163 MRI CYFCS P+YPGHG TFVRND+K+F FCRSKCH+NFN+KRNPRK +WTKA+RKAAGKEM +D TFDF+K+R+R +KYDREL+G TI A+ ++ I+ +RE FY+ RM+++K K KA E+ ++I L+ PAAA+ +++ALLNV K++ A A A Sbjct: 1 MRIHTCYFCSSPVYPGHGITFVRNDSKIFRFCRSKCHKNFNRKRNPRKVKWTKAFRKAAGKEMALDTTFDFDKQRHRAVKYDRELMGATIHAIERVTQIKEKREAAFYKNRMKDSKAKAKARDLRELEQNITLIEPAAAALKDQALLNVSVS-KQKDAAAAEA 162 The following BLAST results are available for this feature:
BLAST of NO26G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00910 ID=NO26G00910|Name=NO26G00910|organism=Nannochloropsis oceanica|type=gene|length=2656bpback to top protein sequence of NO26G00910.1 >NO26G00910.1-protein ID=NO26G00910.1-protein|Name=NO26G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top Synonyms
Publications
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