NO25G00760, NO25G00760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G00760 vs. NCBI_GenBank
Match: PIN11414.1 (60s ribosomal protein L6 [Handroanthus impetiginosus]) HSP 1 Score: 194.9 bits (494), Expect = 4.300e-46 Identity = 120/238 (50.42%), Postives = 150/238 (63.03%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK+ K R L GV +S S K G + K G +KA AAP K P+FYPADD+ P + R KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLVTGPY +NGVPLRRVNQAYVI TS V++S V V DD YFA+ + + E + L A +K + +E +K DQ+AVD ++L AI+ VP L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPKQ------KTRNPELIPGVRKVSRSKMYHKRGLWAIKAKNGGKFPHHEKAPAAAPVAEKPPKFYPADDVKKPLSNKRKA-KPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPYKINGVPLRRVNQAYVIATSTKVNVSGVNV-EKFDDKYFAKQVEKKKKKSENEFLEAEKQEKNELPAE-KKDDQKAVDAELLKAIECVPDLKAYLGARFSLKAGMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_002278032.1 (PREDICTED: 60S ribosomal protein L6-1 [Vitis vinifera]) HSP 1 Score: 194.5 bits (493), Expect = 5.600e-46 Identity = 119/238 (50.00%), Postives = 151/238 (63.45%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG-------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE---EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAP+K + + P L RGV S S K G + K G KK V AP K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL+SG LL+TGP+ +NGVPLRRVNQAYVI TS VDIS V V DD YFA+ + EG+ A +K + E +K DQ+AVD ++A+I+ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPRKTPRTSRNPD---LIRGVGKFSRSKMYHKRGLWAIKAKNGGVFPCHEKKPVAPAPLE-KLPKFYPADDVKKPLIN-KHKAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLITGPFKINGVPLRRVNQAYVIATSTKVDISKVNV-EKFDDKYFAKEVQKKKKGEGEFFEAEKEEKKDLPQE-KKDDQKAVDASLIASIEGVPELKVYLAARFSLKSGMKPHELVF 231
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_007366018.1 (60S ribosomal protein L6 [Dichomitus squalens LYAD-421 SS1] >EJF61189.1 60S ribosomal protein L6 [Dichomitus squalens LYAD-421 SS1]) HSP 1 Score: 194.5 bits (493), Expect = 5.600e-46 Identity = 116/237 (48.95%), Postives = 145/237 (61.18%), Query Frame = 0 Query: 142 RTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPA------------------TGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPAD----AEEGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 R+ +A GV LS SA + G +K K K A PA T KAPRFYPA+D+ P++S R KP KL++ I PG++LI+LAGRFRGKRVVFLKQLASG LLVTGPY +NGVPLRRVNQAYVI TS +D+ KV ++D YFA+PA + E + + G K+ T E + DQ+AVD V+AAIKK L+ YVKA F L KG PH++ F Sbjct: 3 RSKEIAPGVGRLSRSAVYARRGLFKGQKKTEKPAAAETPATKEVSVGGEKNGSTRIVPTKKAPRFYPAEDVRQPKKS-RKSPKPAKLRSSITPGTVLILLAGRFRGKRVVFLKQLASGLLLVTGPYKVNGVPLRRVNQAYVIATSTKLDLGDFKVDEKINDAYFAKPATKGSRSAEEEFFSEGKPKEKTPFPESKAADQKAVDGAVIAAIKKTEYLEKYVKATFGLSKGQFPHQLNF 238
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_024389884.1 (60S ribosomal protein L6-like [Physcomitrella patens] >PNR62682.1 hypothetical protein PHYPA_001106 [Physcomitrella patens]) HSP 1 Score: 194.1 bits (492), Expect = 7.300e-46 Identity = 116/238 (48.74%), Postives = 149/238 (62.61%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG-------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE---EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK R+ L RG+ S T K G + K G KKAV AAPA +AP+FYPADD+P P + V P +L++ I PG++LI+LAG F+GKRVVFLKQL SG LLVTGP+ +NGVPLRRVNQAYVI TS VDIS+V V A D+YF R + E + A +A + E +K+DQ+A+D +++ I+ VP+L Y+ ARFSLK GVKPHE+ F Sbjct: 1 MAPKAT-------RSKELVRGIGRNGRSKTYHKRGLWAIKAKNGGKFPSHEKKAVAAAPAV-RAPKFYPADDVPKPLHKNKVVNAP-RLRSSITPGTVLILLAGHFKGKRVVFLKQLESGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISSVDV-AKFSDSYFKREVAKKTKGESEFFEAEKANEAQTIPEEKKEDQKAIDAKLIPLIEAVPELKSYLAARFSLKSGVKPHELVF 228
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_022885643.1 (60S ribosomal protein L6-like [Olea europaea var. sylvestris]) HSP 1 Score: 194.1 bits (492), Expect = 7.300e-46 Identity = 117/226 (51.77%), Postives = 145/226 (64.16%), Query Frame = 0 Query: 142 RTTMLARGVPSLSHSATVKKGGRYKFFGKGG-------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 R L RGV S S K G + K G KK+V A PA KAP+FYPADD+ P + R KPTKL+A I G++LI+L GRF+GKRVVFLKQLASG LLVTGP+ +NGVPLRRVNQAYV+ TS VDIS V V DD YFA+ A+ + E + A +K + +E +K DQ+AVD +L AI+ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 10 RNPELIRGVGKYSRSQMYHKRGLWAIKAKNGGKFPTHEKKSVAAEPAAEKAPKFYPADDVKKPLSNKRK-HKPTKLRASITTGTVLIILTGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVVATSTKVDISGVNV-EKFDDKYFAKQAEKKKKKGETEFFEAEKEEKNVLPAE-KKDDQKAVDADLLKAIECVPELKFYLGARFSLKAGMKPHELVF 232
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_009775140.1 (PREDICTED: 60S ribosomal protein L6-like [Nicotiana sylvestris] >XP_016463077.1 PREDICTED: 60S ribosomal protein L6-like [Nicotiana tabacum]) HSP 1 Score: 193.7 bits (491), Expect = 9.500e-46 Identity = 121/239 (50.63%), Postives = 152/239 (63.60%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG-------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPKK R L G+ S S K G + K G KK TAAPA K P+FYPADD+ P + +H KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLVTGP+ LNGVPLRRVNQAYVI TS VD+S V V +DD YFA+ A+ + EG+ +K V+ + +K +Q+AVDT ++ AI+ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPKKT------LRNPELIPGLGKFSRSKMYHKKGLWAIKKKNGGTFPSHSKKPTTAAPAI-KPPKFYPADDVAKPLVN-KHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLGSGLLLVTGPFKLNGVPLRRVNQAYVIGTSTKVDVSGVNV-EKIDDKYFAKQAEKKQKKGEGEFFEDKKEEK-NVLPQEKKDEQKAVDTALIKAIEGVPELKAYLSARFSLKAGMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: ORY07445.1 (hypothetical protein K493DRAFT_251100 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 193.7 bits (491), Expect = 9.500e-46 Identity = 115/237 (48.52%), Postives = 144/237 (60.76%), Query Frame = 0 Query: 140 KPRTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPAT------------------GKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAEEGDILAAGTGKK--ATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 KPR + +A G+ LS S+ K YK K TAAP T KA R+YPA+DI P+ S R KPTKL+A I PG++L++LAGRFRGKRVVFLKQLASG LLVTGPY +NGVPLRRVNQAYV+ TS VD+S VKV DD YF + ++ G +K V+SE R DQ+ VD ++LAA+ +VP L Y+ A F+L+KG PH +KF Sbjct: 4 KPRNSFVAPGITRLSRSSVFAKRALYKKQKVAAAKNDTAAPTTKTVQVNGDKNGKERVVALNKASRWYPAEDIAQPKVS-RKTAKPTKLRATITPGTVLVLLAGRFRGKRVVFLKQLASGLLLVTGPYKVNGVPLRRVNQAYVLATSTKVDLSNVKVDEKFDDAYFKKEKTSKAGKTEEEFFDEKQPKKVISESRSADQKVVDKEILAAVAQVPHLRSYLNASFTLRKGQAPHAMKF 239
BLAST of NO25G00760 vs. NCBI_GenBank
Match: KZV37315.1 (hypothetical protein F511_01183 [Dorcoceras hygrometricum]) HSP 1 Score: 193.4 bits (490), Expect = 1.200e-45 Identity = 117/238 (49.16%), Postives = 149/238 (62.61%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAE----EGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK+ RA R L RG+ S S T K G + K G +KA AAP K +FYPADD+ P + R KPTKL+A I PG++LI+LAGRF+GKRVVFLKQL SG LLVTGP+ +NGVPLRRVNQ+YVI TS VD+S V + DD YFA+ + + E + A K + +E +K DQ+A+D +L AI+ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPKQTVPRA--TRNPELTRGIRKHSRSVTYHKRGLWAIKQKNGGKFPHHEKAAEAAPVAEKPQKFYPADDVKKPLSNKRK-PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSGVNLD-KFDDKYFAKQVEKKQKKGENEFFEAEKQDKTALPTE-KKDDQKAIDASLLKAIESVPELKAYLGARFSLKAGMKPHELVF 233
BLAST of NO25G00760 vs. NCBI_GenBank
Match: XP_012854870.1 (PREDICTED: 60S ribosomal protein L6-like [Erythranthe guttata] >EYU22781.1 hypothetical protein MIMGU_mgv1a013134mg [Erythranthe guttata]) HSP 1 Score: 192.2 bits (487), Expect = 2.800e-45 Identity = 116/237 (48.95%), Postives = 148/237 (62.45%), Query Frame = 0 Query: 129 MAPKKVNKRAGKPRTTMLARGVPSLSHSATVKKGGRYKFFGKGG------KKAVTAAPATGKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYFARPADAEEGDILAA---GTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 MAPK+ + R L GV +S SA K G + K G +KAV AAP K P+FYPADDI P + R KPTKL+A I PG++LI+L+GRF+GKRVVFLKQL+SG LLVTGPY +NGVPLRRVNQAYVI TS VD+S V V DD YFA+ + ++ A G ++ + +K DQ+ VD +L ++ VP+L Y+ ARFSLK G+KPHE+ F Sbjct: 1 MAPKQ------RTRNPELIPGVRKVSRSAMYHKRGLWAIKAKNGGKFPHHEKAVAAAPVAEKPPKFYPADDIKKPLSNTRKA-KPTKLRASITPGTVLIILSGRFKGKRVVFLKQLSSGLLLVTGPYKINGVPLRRVNQAYVIGTSTKVDLSGVNV-EKFDDKYFAKQVEKKKEKTEAGFFKGQEEEKNSLPTEKKDDQKTVDAALLKTLETVPELKAYLGARFSLKAGMKPHELVF 229
BLAST of NO25G00760 vs. NCBI_GenBank
Match: ORX93844.1 (hypothetical protein K493DRAFT_262004 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 191.8 bits (486), Expect = 3.600e-45 Identity = 114/239 (47.70%), Postives = 147/239 (61.51%), Query Frame = 0 Query: 141 PRTTMLARGVPSLSHSATVKKGGRYKFFGKGGKKAVTAAPAT-------------------GKAPRFYPADDIPVPRRSARHVQKPTKLKAGIVPGSILIMLAGRFRGKRVVFLKQLASGTLLVTGPYSLNGVPLRRVNQAYVIVTSQAVDISAVKVPATMDDNYF----ARPADAEEGDILAAGTGKKATVVSEGRKKDQEAVDTQVLAAIKKVPQLDGYVKARFSLKKGVKPHEIKF 357 PR + +A G+ LS S+ K YK +K+ AAPAT KA R+YPA+D+ P+ S R KPTKL+A I PG++L++L+GRFRGKRVVFLKQLASG LLVTGPY +NGVPLRRVNQAYV+ TS VD+S V + A DD YF A A E + G +K V+SE R DQ++VD ++LAA+ +VP L Y+ A F+L+KG PH +KF Sbjct: 4 PRNSFIAPGITRLSRSSAFSKRALYKKQKVAAEKS-AAAPATTKTVKVNGEKNGNERVVALNKASRWYPAEDVAQPKTS-RKTAKPTKLRASITPGTVLVLLSGRFRGKRVVFLKQLASGLLLVTGPYKVNGVPLRRVNQAYVVATSTKVDLSNVTIDAKFDDAYFKKEKAPKAKGTEEEFF--GEEQKKKVISESRAADQKSVDKEILAAVAQVPHLRSYLNASFTLRKGQAPHAMKF 238 The following BLAST results are available for this feature:
BLAST of NO25G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G00760 ID=NO25G00760|Name=NO25G00760|organism=Nannochloropsis oceanica|type=gene|length=2377bpback to top protein sequence of NO25G00760.1 >NO25G00760.1-protein ID=NO25G00760.1-protein|Name=NO25G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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