NO21G01720, NO21G01720 (gene) Nannochloropsis oceanica

Overview
NameNO21G01720
Unique NameNO21G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1026
Alignment locationchr21:516434..517459 +

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Properties
Property NameValue
DescriptionReceptor expression-enhancing protein 6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:516434..517459 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004345TB2_DP1_HVA22
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO21G01720 vs. NCBI_GenBank
Match: EWM22663.1 (receptor expression-enhancing protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 317.0 bits (811), Expect = 3.800e-83
Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0
Query:    1 MADAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLS-ATATANDSQSSGETDIKKQN 181
            MAD  KLQLSKLR WLDKYPAMKV+EEKT VPKEY VCGAG +VF+FLLFSNGAGFLCNVIGFLFPAYYSFKAIES NKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKG+LQKYE+ VD HLDAAK S A A AN SQSSGETDIKK+N
Sbjct:    1 MADQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGETDIKKKN 181          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: GAY00745.1 (Hypothetical protein PINS_008562 [Pythium insidiosum])

HSP 1 Score: 157.1 bits (396), Expect = 5.000e-35
Identity = 77/165 (46.67%), Postives = 109/165 (66.06%), Query Frame = 0
Query:    3 DAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLSATATAND 168
            D  ++ + K    LDKYP ++  +E T V K Y+V GA  V+ +FLL   GAG +CN++GF +PAY SFKA+E+ +K DD QWL YWVVY+ F+++E F   +LYWIPFYYAFKL FL++L  P   GA+ +YN+FL   L+  E+ +D  +  A  S+ A  +D
Sbjct:    2 DKLQVYVDKWSKDLDKYPVLQKAQEATGVDKLYLVAGASSVLLLFLLVGFGAGLICNIVGFAYPAYASFKAVETESKADDVQWLTYWVVYACFSVVEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNHFLSPFLKSQESRIDRAVKEAVNSSGAVISD 166          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: GAX97511.1 (Hypothetical protein PINS_005397 [Pythium insidiosum])

HSP 1 Score: 155.2 bits (391), Expect = 1.900e-34
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 0
Query:    3 DAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLSATATAND 168
            D  ++ + K    LDKYP ++  +E T V K Y+V GA  V+ +FLL   GAG +CN++GF +PAY SFKA+E+ +K DD QW  YWVVY+ F+++E F   +LYWIPFYYAFKL FL++L  P   GA+ +YN+FL   L+  E+ +D  +  A  S+ A  +D
Sbjct:    2 DKLQVYVDKWSKDLDKYPVLQKAQEATGVDKLYLVAGASSVLLLFLLVGFGAGLICNIVGFAYPAYASFKAVETESKADDVQWXTYWVVYACFSVVEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNHFLSPFLKSQESRIDRAVKEAVNSSGAVISD 166          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: XP_004349466.1 (receptor accessory protein 5 [Capsaspora owczarzaki ATCC 30864] >KJE91599.1 receptor accessory protein 5 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 154.5 bits (389), Expect = 3.200e-34
Identity = 78/176 (44.32%), Postives = 118/176 (67.05%), Query Frame = 0
Query:    1 MADAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLSATATANDS-QSSGETD 176
            M D  KL L KL   L+KYP M  ++++TKVPK Y+  G   ++ + L    GA  +CN++GF++PAY SFKAIES+NK+DD QWL YWVV++FF+++E F  +IL+W+PFYY  K  FLVYL  P  NGA  +Y N ++  L + +A +D  +   + +AT+ A+ + Q++ +T+
Sbjct:    1 MGDQVKLYLDKLDAELNKYPFMIRLQDQTKVPKAYLAIGGFLLILLSLSAGLGAQLVCNIVGFVYPAYASFKAIESTNKDDDTQWLTYWVVFAFFSLLEFFSDIILHWLPFYYLMKFVFLVYLMLPTLNGAAQLYQNVIRRFLLQNQADIDHGISKVRGAATSAASSAVQNANKTE 176          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: XP_002178086.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50900.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 154.5 bits (389), Expect = 3.200e-34
Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 0
Query:    3 DAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHL 155
            D  + +L  LRT LDKYP ++  E  T VPKE++V G G +  +  +F  G   L +++GF++PA+ SF+AIE+ +K DD QWLVYWV+++FF+IIE FV V+LYWIPFY+AFKLAFL++   P   GA  +Y +FLK LL+K E+ +D  L
Sbjct:    2 DIVQEKLQVLRTKLDKYPVLQQAESTTSVPKEFLVLGGGLLFAVLTVFGIGIASLTSLVGFVYPAFKSFQAIETKSKGDDTQWLVYWVIFAFFSIIEVFVDVLLYWIPFYFAFKLAFLLWAMLPQTKGAKFLYESFLKDLLKKNESKIDQAL 153          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: OEU15620.1 (TB2_DP1_HVA22-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 154.5 bits (389), Expect = 3.200e-34
Identity = 81/162 (50.00%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    9 LSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYE---AAVDTHLDAAKLSATATAND 168
            L+ LR  LD+ PA++ VE K KVPKEY+V    F+  + + F  GA  LC+ IGF+FPAY +  AIE  NK DD QWLVYW++YSFF++IE F   ILYWIPFY+AFKLAFL++   P   GA L+Y++FLK  L++     + +DT +  AK SA  T ++
Sbjct:   16 LALLRVKLDQIPALQDVENKLKVPKEYLVIAGTFLFVVLVFFGIGANTLCSFIGFMFPAYQTILAIEKKNKGDDTQWLVYWILYSFFSVIETFQDFILYWIPFYFAFKLAFLLWAMLPQTRGAKLLYDSFLKDFLKRSSNSMSRIDTAMQEAKKSADTTTSE 177          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: GAX28581.1 (hypothetical protein FisN_1Hh629 [Fistulifera solaris] >GAX19903.1 hypothetical protein FisN_1Lh629 [Fistulifera solaris])

HSP 1 Score: 151.8 bits (382), Expect = 2.100e-33
Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 0
Query:    3 DAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLSATATANDSQSS 172
            D  + QL  +RT LDKYP  + VE+KT  PKE +  G   V         G G L +++GF +PA+ SF+AIE+ +K DD QWLVYWV+++FF+I+E FV ++LYWIPFYYAFKLAFL++   P   GA  +Y+ FLK LL+K E+ +D  L  AK  A A  ++  S+
Sbjct:    2 DIVQKQLKVVRTRLDKYPVFQEVEDKTGAPKEIVALGLAVVXXXXXXXXMGVGSLSSLVGFCYPAFKSFQAIETKHKGDDTQWLVYWVIFAFFSIMETFVDLLLYWIPFYYAFKLAFLLWAMMPQTKGAKYLYDTFLKDLLKKNESKIDAALAEAKKHAGAMGSEFASA 170          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: OQS06293.1 (hypothetical protein THRCLA_01660 [Thraustotheca clavata])

HSP 1 Score: 151.4 bits (381), Expect = 2.700e-33
Identity = 80/162 (49.38%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    8 QLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHL-DAAKLSATATANDS 169
            QL K +  L+KYP +  +EE+T V K Y+  GA  +V + +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+++FL+  L+ +E  +D  + + A  S T  A+ S
Sbjct:    7 QLEKTKAELNKYPILVQLEEQTGVDKLYLTIGAVGIVLLIVLVGFGAGLLCNLVGFVYPAYASFKAIESESKADDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFSHFLQPFLKTHEENIDAAISNIAANSGTVIADIS 168          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: XP_012196314.1 (hypothetical protein SPRG_02348 [Saprolegnia parasitica CBS 223.65] >KDO32647.1 hypothetical protein SPRG_02348 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 149.8 bits (377), Expect = 8.000e-33
Identity = 74/149 (49.66%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    3 DAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVD 152
            D    QL K +  L+KYP +  +E +T V K Y+      ++ + +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+N+FL+  L+ +EA +D
Sbjct:   19 DQVNAQLEKAKAELNKYPILVQLEAQTGVDKLYLTVAGVALLLLVVLVGFGAGLLCNLVGFVYPAYASFKAIESDSKNDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFNHFLQPFLKSHEANID 167          
BLAST of NO21G01720 vs. NCBI_GenBank
Match: OQR96400.1 (hypothetical protein ACHHYP_15842 [Achlya hypogyna])

HSP 1 Score: 149.4 bits (376), Expect = 1.000e-32
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 0
Query:    8 QLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLFSNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAVDTHLDAAKLSATATAND 168
            QL K +  L+KYP +  +EE+T V K Y+  G   ++ + +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+++FL+  L+  E  +D  L+  K ++ +   D
Sbjct:    7 QLEKAKAELNKYPILVQLEEQTGVDKVYLTAGGVVLLLLVVLVGFGAGLLCNLVGFVYPAYASFKAIESESKTDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFSHFLQPFLKAQEDNIDAALNNIKSNSGSVIAD 166          
The following BLAST results are available for this feature:
BLAST of NO21G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22663.13.800e-8388.95receptor expression-enhancing protein 6 [Nannochlo... [more]
GAY00745.15.000e-3546.67Hypothetical protein PINS_008562 [Pythium insidios... [more]
GAX97511.11.900e-3446.06Hypothetical protein PINS_005397 [Pythium insidios... [more]
XP_004349466.13.200e-3444.32receptor accessory protein 5 [Capsaspora owczarzak... [more]
XP_002178086.13.200e-3450.00predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU15620.13.200e-3450.00TB2_DP1_HVA22-domain-containing protein [Fragilari... [more]
GAX28581.12.100e-3347.34hypothetical protein FisN_1Hh629 [Fistulifera sola... [more]
OQS06293.12.700e-3349.38hypothetical protein THRCLA_01660 [Thraustotheca c... [more]
XP_012196314.18.000e-3349.66hypothetical protein SPRG_02348 [Saprolegnia paras... [more]
OQR96400.11.000e-3247.50hypothetical protein ACHHYP_15842 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004608NSK004608Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01720.1NO21G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602602gene_8134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100023g7gene7766Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01720.1NO21G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01720 ID=NO21G01720|Name=NO21G01720|organism=Nannochloropsis oceanica|type=gene|length=1026bp
ATGGCTGACGCTTTCAAGCTCCAACTCTCCAAGCTTCGCACCTGGCTGGA
CAAGTACCCGGCCATGAAGGTCGTGGAGGAGAAGACCAAGGTGCCCAAGG
AGTACATTGTCTGCGGGGCTGGTTTCGTGGTCTTTATGTTCCTCCTCTTT
AGCAACGGTGCCGGCTTCCTCTGgtgcgtgggaggagggggcggtgagaa
agaagggcggacgtgacgaaatggaagagtaaacttctgttggcagcacc
tgtatgctcactggatttcttcaccttgcacccccaaacacagCAACGTG
ATCGGCTTTCTCTTCCCAGCCTACTACTCGTTCAAGGCGATTGAGAGCTC
CAACAAGGAGGACGACAAGCAGTGgtacgtatcttgtagagagagaagaa
gcaaagtgagggaaagatgaaggattacggaagcaagcccacggtcgttc
ccttcagcgcacaactgctttctttaatgttgcgatagagatatggagtt
taagtgggcgcctcctccaagtgtcgactgaggcgcgagtttgtcacttt
ccctcatggtttcgacaaagcgcctctaacactaatatgagttctcttct
cttttctctatgcttttacacgacagGTTGGTGTACTGGGTGGTGTATTC
CTTCTTCACCATCATCGAGGCCTTCGTCTCTGTCATCCTCTACTGgtaag
cttgacgaggggggacgggaaggggaataactccgtgcgttgggggcgcg
tgtctctacctcggtatgtcactcaccacttttcccaccttcccccccct
ggccagGATCCCCTTCTATTACGCGTTCAAGCTGGCCTTCCTCGTGTACC
TGGGCTACCCTGGCTGGAATGGCGCCACGCTTATCTACAACAACTTTCTC
AAGGGCCTCCTCCAGAAATACGAGGCCGCCGTCGACACCCACCTGGACGC
TGCCAAGCTCTCGGCCACGGCCACGGCCAACGACAGCCAGAGCAGCGGCG
AGACGGATATCAAGAAGCAGAACTAA
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protein sequence of NO21G01720.1

>NO21G01720.1-protein ID=NO21G01720.1-protein|Name=NO21G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MADAFKLQLSKLRTWLDKYPAMKVVEEKTKVPKEYIVCGAGFVVFMFLLF
SNGAGFLCNVIGFLFPAYYSFKAIESSNKEDDKQWLVYWVVYSFFTIIEA
FVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGLLQKYEAAV
DTHLDAAKLSATATANDSQSSGETDIKKQN*
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Synonyms
Publications