NO21G00170, NO21G00170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 99.0 bits (245), Expect = 1.800e-17 Identity = 75/204 (36.76%), Postives = 108/204 (52.94%), Query Frame = 0 Query: 1 MRSAFSLLALGTTF---VLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKT-SSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTPGASTPAPTGLP 198 MRSAFS LA+G TF ++T A + L SI+AVD + NKD W +KG +DDP+ T VP + GL V L D + ++ V FA S+C N + CK+ GAR ++ K ++ PK + + + H KT +S YY+++G R F V +PLT N L+ T T C + + ++T C PG P P P Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSI-KSSRRPK--LKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTV-NGDVLSDTLTSCYDLPRMNGRNTITHCEPGPPVPTPGXXP 200
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = 0 Query: 1 MRSAFSLLALGTTF----VLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKT-SSESFYYKLSGVFRRQEFTAT-VATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTPGASTPAPT 195 MRSA SLL LG TF V TA Q + L SI+ VD + NKD W +KG ++DP+ T VP + GL V L D+ ++ V FA S+C + + CK+ GAR ++ K ++ PK + + + H K+ +S YY ++G FR F V +PLT N L+ T T C + + ++T C PG P PT Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDL-NLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSI-KTSRRPK--VKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRI-NGSVLSDTLTSCYDLARKSGRNTISHCEPGPPAPTPT 197
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = 0 Query: 1 MRSAFSLLALGTTF----VLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKT-SSESFYYKLSGVFRRQEFTAT-VATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTPGASTPAPT 195 MRSA SLL LG TF V TA Q + L SI+ VD + NKD W +KG ++DP+ T VP + GL V L D+ ++ V FA S+C + + CK+ GAR ++ K ++ PK + + + H K+ +S YY ++G FR F V +PLT N L+ T T C + + ++T C PG P PT Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDL-NLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSI-KTSRRPK--VKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRI-NGSVLSDTLTSCYDLARKSGRNTISHCEPGPPAPTPT 197
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 94.4 bits (233), Expect = 4.400e-16 Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 0 Query: 1 MRSAFSLLALGTTF---VLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPK--SAMISAQKKHNKTSSESFYYKLSGVFRRQEFTAT-VATPLTVIFAAGNVGTLAVTNTDCTE---KDGAKSTRYLCTPGASTPAP 194 MRS SLLALG T ++T + L SI+AVD + NKD W +KG ++DP+ T VP + GL V L D+ ++ V FA +C + K CK+ GAR + K ++ PK + K++N T YY ++G FRR F V +PLT N L+ T T C + K+G + C PG P P Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFI-KTSRRPKINTPKTVHAKRYNSTGG---YYSVTGTFRRLTFLENPVVSPLTAALTV-NESVLSDTLTSCYDLPRKNGRNPITH-CEPGPPVPTP 264
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 1.100e-14 Identity = 72/202 (35.64%), Postives = 105/202 (51.98%), Query Frame = 0 Query: 1 MRSAFSLLA----LGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKT-SSESFYYKLSGVFRRQEFTAT-VATPLTVIFAAGNVGTLAVTNTDC--TEKDGAKSTRYLCTPGASTPAPT 195 MRS SLLA LG+T V TA Q + L SI+AVD + NKD W +KG ++DP+ T V + GL V L D+ ++ V FA S+C + + CK+ GAR ++ K ++ PK + + + H K+ +S YY ++G FR F V +PLT + L+ T T C + ++T C PG P PT Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDL-NLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSI-KTSRRPK--IKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTV-DESVLSDTLTLCYNLPRKNGRNTISHCEPGPPVPTPT 197
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM25644.1 (hypothetical protein Naga_100037g5 [Nannochloropsis gaditana]) HSP 1 Score: 81.6 bits (200), Expect = 2.900e-12 Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 0 Query: 35 RENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEF-TATVATPLTVIFAAGNVGTLAVTNTDCTE------KDGAKSTRYLC 185 + +D+W++ G+ +DP T V + G+ L D+ +S+ F P +C L N +G CK TGAR L+K K P S + K SSE +YK+ GVFRR F V TPLT IFA T V T TE K G K T+ C Sbjct: 163 KAKRDRWTITGFFNDPAETAVVNIGQYGIIAVLQDAAKKALSSTFFTPPQCKALNNIRGVTCKTTGARLRLKK-TKDP-----SVRNK----SSEGAFYKVKGVFRRLTFLQQPVQTPLTTIFAVQFPNTTTVFTTSATEQCTEKGKTGGKKTKIDC 309 The following BLAST results are available for this feature:
BLAST of NO21G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00170 ID=NO21G00170|Name=NO21G00170|organism=Nannochloropsis oceanica|type=gene|length=2340bpback to top protein sequence of NO21G00170.1 >NO21G00170.1-protein ID=NO21G00170.1-protein|Name=NO21G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
|