NO20G01710, NO20G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO20G01710 vs. NCBI_GenBank
Match: EWM22066.1 (hypothetical protein Naga_100244g8 [Nannochloropsis gaditana]) HSP 1 Score: 260.8 bits (665), Expect = 4.800e-66 Identity = 134/255 (52.55%), Postives = 179/255 (70.20%), Query Frame = 0 Query: 1 MPPRPRDDLRISQEDWFKFSKLAAGGFTFVLALSGFQCMQG-LARISAAHPLASALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARK--ITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAAMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVLV 253 M P + R SQEDW K S+L AGG TF+L LS Q +QG L ISAA A+ G++SV TGS++AS AD+AP+ L A+GW P RK + + +S S L D K++E++L R A++G+++FKG GGRFS VAPS+VA+PGAFF ++G+LPA EYAS QKR LD FG +GCH+CGR++M Y+GDHMPP+KVA+ M+R+WWR L R+ QRF PQC+PCSSIQSAAVR+++++LV Sbjct: 1 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAG-KKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILV 254
BLAST of NO20G01710 vs. NCBI_GenBank
Match: XP_005854359.1 (hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526] >EKU21999.1 hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 177.2 bits (448), Expect = 7.000e-41 Identity = 87/170 (51.18%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 57 LISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARK--ITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAAMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKR 225 ++SV TGS++ASL AD+AP+ L A+GW P RK + + +S S L D K++E++L R A++G+++FKG GGRFS VAPS+VA+PGAFF ++G+LPA EYAS QKR LD FG +GCH+CGR++M Y+GDHMPP+KVA+ M+R+WWR L R Sbjct: 1 MLSVSTGSMLASLAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAG-KKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR 169
BLAST of NO20G01710 vs. NCBI_GenBank
Match: CBJ26909.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 153.3 bits (386), Expect = 1.100e-33 Identity = 93/236 (39.41%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 20 SKLAAGGFTFVLALSGFQCMQGLA-RISAAHPLA--SALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDP-DQKEEEQILRVLRAAMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 ++ GG FV L+ Q +QG A R+S + PL +ALG +V SV + VA+ S L + KD Q+ S W+ + E+ + A+ G+V+F+ GGRFSSVAPS + PGAF R+ SLPAT EYAS +++AL G FGCH+CG + +I DHMPP K N K WR + ++QRF PQCQ CS++QSAAVR+ + L Sbjct: 50 TQAVGGGGAFVAVLALSQALQGFALRVSCSSPLGLPTALGFATVAAASVASVRVAEGISSGL--------------EAASSKD---SQRISDPWRSMLEAAEQPANSGEIGASSFGLVLFRALGGRFSSVAPSALHMPGAFSRLSASLPATLEYASDGKRQALATLGKNFGCHTCGTRAPATFIADHMPPLKTVKLANAKLWRRALRQTVSQRFYPQCQACSTLQSAAVRSGQTTL 268
BLAST of NO20G01710 vs. NCBI_GenBank
Match: GAY03878.1 (Hypothetical protein PINS_011699 [Pythium insidiosum]) HSP 1 Score: 133.3 bits (334), Expect = 1.200e-27 Identity = 81/228 (35.53%), Postives = 114/228 (50.00%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHPLA-SALGLISVGTGSVM----ASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAAMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVR 246 + GG F L ++G Q +Q RI +A +A +G I+V + S + ASL + S + W + +DL + +MG++ FK GGR S+APS A GAF K SLPAT EYAS V++ + FG FGCH+CG ++ + Y DHMPP+KVA MN++WWR L + + RF PQC PCS+ Q V+ Sbjct: 55 STGGVLFWLGITGAQLLQRGLRIGSATRVAPRVIGTIAVASASTVALHFASLPRELRSSGXSRCDSWPRNLQQTVAVAVXEDLRDAPYPIYM-------------------VMGVLCFKMLGGRMRSLAPSPFADLGAFHLRKASLPATDEYASAVERGVIQEFGRLFGCHTCGVRKRVTYHADHMPPRKVARQMNQQWWRRLSGREVEFRFYPQCSPCSNTQGTVVK 263
BLAST of NO20G01710 vs. NCBI_GenBank
Match: ETI56831.1 (hypothetical protein F443_00769 [Phytophthora parasitica P1569] >ETK96609.1 hypothetical protein L915_00715 [Phytophthora parasitica] >ETL49972.1 hypothetical protein L916_00709 [Phytophthora parasitica] >ETM03045.1 hypothetical protein L917_00672 [Phytophthora parasitica] >ETO85565.1 hypothetical protein F444_00770 [Phytophthora parasitica P1976] >ETP26613.1 hypothetical protein F441_00757 [Phytophthora parasitica CJ01A1] >ETP54609.1 hypothetical protein F442_00717 [Phytophthora parasitica P10297]) HSP 1 Score: 127.9 bits (320), Expect = 4.800e-26 Identity = 83/233 (35.62%), Postives = 116/233 (49.79%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHP--LASALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAA--MMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 A GG F+ +S Q Q L RI +A L A+G +V + S++A A + + + + G L P L Q Q+ E + + MG++ FK GGR S++APS GAF K SLPAT EYA+ V++ + FG FGCH+CG K ++Y DHMPPK VA + + R L ++ T RF PQC+PCS+ Q A V+ K L Sbjct: 36 ATGGALFLGGVSAAQVAQKLLRIGSASGFLLPQAVGAAAVASSSILALHFASIPREVYQELAAQSRRANERSWLVLGARNLKPPTAWKLLQTKVQERWEDLPQAPYPVYMAMGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTL 268
BLAST of NO20G01710 vs. NCBI_GenBank
Match: XP_008890319.1 (hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310] >ETM56292.1 hypothetical protein L914_00702 [Phytophthora parasitica] >ETN24232.1 hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310]) HSP 1 Score: 127.9 bits (320), Expect = 4.800e-26 Identity = 83/233 (35.62%), Postives = 116/233 (49.79%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHP--LASALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAA--MMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 A GG F+ +S Q Q L RI +A L A+G +V + S++A A + + + + G L P L Q Q+ E + + MG++ FK GGR S++APS GAF K SLPAT EYA+ V++ + FG FGCH+CG K ++Y DHMPPK VA + + R L ++ T RF PQC+PCS+ Q A V+ K L Sbjct: 36 ATGGALFLGGVSAAQVAQKLLRIGSASGFLLPQAVGAAAVASSSILALHFASIPREVYQELAAQSRRANERSWLVLGARNLKPPTAWKLLQTKVQERWEDLPQAPYPVYMAMGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTL 268
BLAST of NO20G01710 vs. NCBI_GenBank
Match: XP_002897109.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65480.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 125.2 bits (313), Expect = 3.100e-25 Identity = 83/236 (35.17%), Postives = 118/236 (50.00%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHP--LASALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRA-----AMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 A GG F+ +S Q Q L + +A L A+G +V + SV+A A + + + + G L P + W+ K +E+ + +A MG++ FK GGR SS+APS A GAF K SLPAT EYA+ V++ + FG FGCH+CG K ++Y DHMPPK VA + + R L ++ T RF PQC+PCS+ Q V+ K L Sbjct: 36 ATGGALFLGGVSAAQVAQKLLHVGSASGFLLPQAVGTAAVASSSVLALHFASIPRDVYQELSAQSRRVNERSWLVLGVHNLQP---PTAWRQLQSKMQERWADLPQAPYQVYMAMGLLCFKLLGGRMSSLAPSPFANLGAFHLKKASLPATIEYATSVERGIIREFGRLFGCHTCGVKRGVRYHADHMPPKLVAKHTDEQLVRRLLGRKTTFRFYPQCEPCSNQQGTVVKQWKSTL 268
BLAST of NO20G01710 vs. NCBI_GenBank
Match: OWZ10215.1 (hypothetical protein PHMEG_00016968 [Phytophthora megakarya]) HSP 1 Score: 120.6 bits (301), Expect = 7.700e-24 Identity = 80/236 (33.90%), Postives = 120/236 (50.85%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHP--LASALGLISVGTGSVMA---SLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAA--MMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 A GG F+ +S Q +Q L RI +A L ALG +V + SV+A + + + L A + G L P L Q+ Q+ E + +MG++ ++ GGR S++APS A GAF K SLPAT EYA+ V++ + FG +GCH+CG K+ ++Y DHMPPK VA + ++ R + ++ RF PQC+ CS+ Q + V+ K L Sbjct: 39 ATGGALFLGGVSTAQVVQKLLRIGSASSFLLPQALGAAAVASSSVLALHFASIPREIYQELAMQSRQANEQRGWSWLVLGARNLQPPTAWKLAQNKVQERWEDLPEAPYPVYMVMGLLCYRLLGGRMSALAPSPFANLGAFHLKKASLPATAEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLVAKRTDEQFLRKILGRKTPFRFYPQCESCSNQQGSVVKQWKSTL 274
BLAST of NO20G01710 vs. NCBI_GenBank
Match: XP_008605730.1 (hypothetical protein SDRG_01951 [Saprolegnia diclina VS20] >EQC40886.1 hypothetical protein SDRG_01951 [Saprolegnia diclina VS20]) HSP 1 Score: 118.2 bits (295), Expect = 3.800e-23 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 122 LRVLRAAMMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRAN-KQVLVSMQE 257 L + AA G+++F+ GGRF ++APSD PGAF + SLPAT EYA + + FG +GCH+CG K +Y DHMPP VA A N + W LF +TQR+ PQC+ CS+ Q A V+ N KQ+ + + E Sbjct: 100 LELTAAATSGLLLFRLLGGRFRALAPSDFRHPGAFGHARISLPATIEYADGNARAVIQSFGRLYGCHTCGTKRS-KYHADHMPPVLVAKAENARLWAKLFGP-VTQRYYPQCESCSNTQGALVKKNAKQLKLHLTE 233
BLAST of NO20G01710 vs. NCBI_GenBank
Match: XP_024571778.1 (hypothetical protein PHALS_09531 [Plasmopara halstedii] >CEG35409.1 hypothetical protein PHALS_09531 [Plasmopara halstedii]) HSP 1 Score: 118.2 bits (295), Expect = 3.800e-23 Identity = 78/233 (33.48%), Postives = 112/233 (48.07%), Query Frame = 0 Query: 23 AAGGFTFVLALSGFQCMQGLARISAAHP--LASALGLISVGTGSVMASLVADQAPSALCKAMGWAPPTHSARKITCGKDLLSPQKCSSLWQDPDQKEEEQILRVLRAA--MMGIVIFKGFGGRFSSVAPSDVARPGAFFRMKGSLPATYEYASQVQKRALDGFGAKFGCHSCGRKEMLQYIGDHMPPKKVAMAMNRKWWRWLFNKRITQRFMPQCQPCSSIQSAAVRANKQVL 252 A GG F+ +S Q Q L I +A L ALG +V + SV+A A + + T + GK L P L + + MG++ FK GGR S++APS A GAF K SLPAT EYA+ V++ + FG +GCH+CG K+ ++Y DHMPPK + + +++R ++ T RF PQC+ CS+ Q V+ K L Sbjct: 36 ATGGAIFLCGISVAQVAQKLLHIGSASGFFLPQALGTAAVASSSVLALHFASIPRDVYQEIAARSRSTKEQSWLVLGKRHLQPPTALRLVHSRVLERWGNLAHAPYPVYMAMGVLCFKILGGRMSALAPSPFANLGAFHLKKASLPATVEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLLGSRTDNQFFRKFLGQKTTFRFYPQCESCSNQQGNVVKQLKSTL 268 The following BLAST results are available for this feature:
BLAST of NO20G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01710 ID=NO20G01710|Name=NO20G01710|organism=Nannochloropsis oceanica|type=gene|length=1593bpback to top protein sequence of NO20G01710.1 >NO20G01710.1-protein ID=NO20G01710.1-protein|Name=NO20G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bpback to top protein sequence of NO20G01710.2 >NO20G01710.2-protein ID=NO20G01710.2-protein|Name=NO20G01710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=270bpback to top Synonyms
Publications
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