NO20G00240, NO20G00240 (gene) Nannochloropsis oceanica

Overview
NameNO20G00240
Unique NameNO20G00240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2189
Alignment locationchr20:81101..83289 +

Link to JBrowse

Properties
Property NameValue
DescriptionTDP-4-oxo-6-deoxy-D-glucose aminotransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:81101..83289 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR015424PyrdxlP-dep_Trfase
IPR000653DegT/StrS_aminotransferase
IPR000182GNAT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO20G00240 vs. NCBI_GenBank
Match: OQW94336.1 (dTDP-4-amino-4,6-dideoxygalactose transaminase [Beggiatoa sp. IS2])

HSP 1 Score: 350.1 bits (897), Expect = 1.500e-92
Identity = 184/385 (47.79%), Postives = 239/385 (62.08%), Query Frame = 0
Query:  267 RVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHF 651
            ++ +N P++ G E   +++ +    L   G  T  C  WL+ +L C +A+LT S TAALE + +LC I PGDEVI+PSFTFVSTANA  LR ATPVFID+  D LN+D   +  A+T KTKAI+ VHY G +C+MD I+ +AK+ +LYVIEDAAQA LS+YK + LGTIGHLGC+SFH TKN + GEGGALL+ND +    A IIREKGTNR+ F  G V KY W+ +GSSY+PSEL  AFL  QL  A      R R+C  YR LL+PL              ++G   L     NGHLF I+  S   RK     +    V  + H+VPLH S  G KYG+V    +L  T   S  +LRLPV+ G++   I++VV  ++  F
Sbjct:    2 KIPFNKPFIIGKELFNIAQAVIDGHLSGDGELTKKCHKWLQDHLHCQRAMLTHSCTAALEMSAILCNIQPGDEVILPSFTFVSTANAFVLRGATPVFIDIRPDTLNIDENLIESAITEKTKAIVPVHYAGVSCEMDEILKIAKQHDLYVIEDAAQAILSEYKNQKLGTIGHLGCMSFHETKNVMSGEGGALLINDEKLIERAEIIREKGTNRSRFFRGEVDKYTWVDIGSSYLPSELVGAFLYAQLEHAEMITKERMRICQQYRTLLSPL-------------QQSGYLQLPTHIDNGHLFYILTRSLQERKELIVFLKKHQVLTVFHYVPLHSSPAGQKYGRV--SGNLSVTDNVSETILRLPVYYGIKDEEIEFVVDNIHRFF 371          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_054915641.1 (MULTISPECIES: dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [Pseudomonas] >OUM22221.1 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [Pseudomonas sp. 1239])

HSP 1 Score: 337.4 bits (864), Expect = 1.000e-88
Identity = 178/390 (45.64%), Postives = 237/390 (60.77%), Query Frame = 0
Query:  268 VQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDVGDD-LNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFGEDCPS 657
            + +N P++ G E   +++ + +  +   G +T  C+ WLE NLGC KALLT S TAALE A +L  +GPGDEVIMPSFTFVSTANA  LR A PVF+D+ DD LN+D   V  A+T KTKA++ VHY G  CDMD +  + ++  L++IEDAAQA L++ + R LGTIGHLGCLSFH TKN + GEGGALL+NDPR    A II +KGTNR  F  G VSKY W+ +GSS++PSEL +AFL  QL         R+ + + Y  LL PLAA G F+  + L D+           N H+F ++  S + R      +    V  + H+VPLH S  G++Y +      L  T   S  LLRLP++  MR   + +V   +   F +D PS
Sbjct:    6 IPFNKPFVVGKELFYIAQAVMNGSIAGDGEFTTLCQGWLENNLGCEKALLTHSCTAALEMAAILADVGPGDEVIMPSFTFVSTANAFVLRGAVPVFVDIRDDTLNLDERLVEAAITDKTKAVVAVHYAGQPCDMDALAQICEKHGLFLIEDAAQAILARDRKRALGTIGHLGCLSFHETKNVISGEGGALLINDPRLVERAEIIWQKGTNRKAFSRGEVSKYTWVDVGSSFLPSELTAAFLYAQLEHGERINKHRRTLYEKYFSLLRPLAADGLFQLPRTLDDKP---------ANAHIFYLLMRSVEERTALIAFLREHGVNAVFHYVPLHDSPAGLRYAR--SSGQLPITTDVSQRLLRLPLFSDMRSRQVAHVCACIARFF-QDKPS 383          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_057267043.1 (dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [Acidovorax sp. Root219] >KRC29182.1 TDP-4-oxo-6-deoxy-D-glucose aminotransferase [Acidovorax sp. Root219])

HSP 1 Score: 337.0 bits (863), Expect = 1.300e-88
Identity = 179/384 (46.61%), Postives = 237/384 (61.72%), Query Frame = 0
Query:  267 RVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTC-GNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYE 649
            ++ +N PY+TG E   +++      L   G +T  C  WLE   G +KALLT S TAALE A +L  +GPGDEVIMPS+TFVSTANA  LR A PVF+D+  D LN+D   +  A+T +TKAI+VVHY G +C+MD IM +AK  EL VIEDAAQ  +S YKGR LG+IGH+GCLSFH TKN + GEGGALL+N+P F   A IIREKGTNR+ F  G V KY W  LGSS++P EL +AFL  Q+  A+    +R  +   Y   L  L + G  R            ++ D C  N H++ ++ P  DSR M    + T  +  + H+VPLH +  G K+G+  PH S++ T + SA L+RLP+W G+   H   V+  + E
Sbjct:    3 KIPFNKPYMTGKELWYIAQAHAQGHLAGDGNFTKLCSRWLEQRTGATKALLTHSCTAALEMAAMLANLGPGDEVIMPSYTFVSTANAFVLRGAIPVFVDIRSDTLNIDETLIEAAITPRTKAIVVVHYAGVSCEMDEIMEIAKRHELIVIEDAAQGIMSTYKGRPLGSIGHMGCLSFHETKNIISGEGGALLINNPEFVDRAEIIREKGTNRSLFFRGQVDKYTWCDLGSSFLPGELITAFLWAQMEAADSITAQRLSLWSQYHHSLEALESTGRIR----------RPIVPDHCQQNAHMYYVLLPDLDSRTMFIERLKTLGIGAVFHYVPLHSAPAGRKFGR--PHGSMDVTDSHSARLVRLPLWMGLE-EHFDEVIAAVGE 373          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_058542058.1 (MULTISPECIES: dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [Pseudomonas] >KTC17372.1 TDP-4-oxo-6-deoxy-D-glucose aminotransferase [Pseudomonas putida])

HSP 1 Score: 337.0 bits (863), Expect = 1.300e-88
Identity = 178/390 (45.64%), Postives = 237/390 (60.77%), Query Frame = 0
Query:  268 VQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDVGDD-LNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFGEDCPS 657
            + +N P++ G E   +++ + +  +   G +T  C+ WLE NLGC KALLT S TAALE A +L  +GPGDEVIMPSFTFVSTANA  LR A PVF+D+ DD LN+D   V  A+T KTKA++ VHY G  CDMD +  + ++  L++IEDAAQA L++ + R LGTIGHLGCLSFH TKN + GEGGALL+NDPR    A II +KGTNR  F  G VSKY W+ +GSS++PSEL +AFL  QL         R+ + + Y  LL PLAA G F+  + L D+           N H+F ++  S + R      +    V  + H+VPLH S  G++Y +      L  T   S  LLRLP++  MR   + +V   +   F +D PS
Sbjct:    6 IPFNKPFVVGKELFYIAQAVMNGSIAGDGEFTTLCQGWLENNLGCEKALLTHSCTAALEMAAILADVGPGDEVIMPSFTFVSTANAFVLRGAVPVFVDIRDDTLNLDERLVEAAITDKTKAVVAVHYAGQPCDMDVLAQICEKHGLFLIEDAAQAILARDRKRALGTIGHLGCLSFHETKNVISGEGGALLINDPRLVERAEIIWQKGTNRKAFSRGEVSKYTWVDVGSSFLPSELTAAFLYAQLEHGERINKHRRTLYEKYFSLLRPLAADGLFQLPRTLDDKP---------ANAHIFYLLMRSVEERTALIAFLREHGVNAVFHYVPLHDSPAGLRYAR--SSGQLPITTDVSQRLLRLPLFSDMRSRQVAHVCACIARFF-QDKPS 383          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_078480283.1 (dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MF6396] >OOW03497.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MF6396])

HSP 1 Score: 336.7 bits (862), Expect = 1.700e-88
Identity = 178/390 (45.64%), Postives = 237/390 (60.77%), Query Frame = 0
Query:  268 VQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDVGDD-LNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFGEDCPS 657
            + +N P++ G E   +++ + +  +   G +T  C+ WLE NLGC KALLT S TAALE A +L  +GPGDEVIMPSFTFVSTANA  LR A PVF+D+ DD LN+D   V  A+T KTKA++ VHY G  CDMD +  + ++  L++IEDAAQA L++ + R LGTIGHLGCLSFH TKN + GEGGALL+NDPR    A II +KGTNR  F  G VSKY W+ +GSS++PSEL +AFL  QL         R+ + + Y  LL PLAA G F+  + L D+           N H+F ++  S + R      +    V  + H+VPLH S  G++Y +      L  T   S  LLRLP++  MR   + +V   +   F +D PS
Sbjct:    6 IPFNKPFVVGKELFYIAQAVMNGSIAGDGEFTTLCQGWLENNLGCEKALLTHSCTAALEMAAILADVGPGDEVIMPSFTFVSTANAFVLRGAVPVFVDIRDDTLNLDERLVEAAITDKTKAVVAVHYAGQPCDMDVLAQICEKHGLFLIEDAAQAILARDRKRALGTIGHLGCLSFHETKNVISGEGGALLINDPRLVERAEIIWQKGTNRKAFSRGEVSKYTWVDVGSSFLPSELTAAFLYAQLEHGERINKHRRTLYEKYFSLLRPLAADGLFQLPRTLDDKP---------ANAHIFYLLVRSVEERTALIAFLREHGVNAVFHYVPLHDSPAGLRYAR--SSGQLPITTDVSQRLLRLPLFSDMRSRQVAHVCACIARFF-QDKPS 383          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_102595471.1 (MULTISPECIES: dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas] >PMV80443.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW101-1A09] >PMV87049.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW306-2-2C-B10A] >PMV91275.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-C8] >PMW00004.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MPR-TSA4] >PMW08852.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW306-2-1A-C05A] >PMW12617.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW507-14D01] >PMW14322.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW456-E6] >PMW28057.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-C2] >PMW28087.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-7] >PMW29125.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MPR-E5] >PMW47068.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-11-11-14-LB11] >PMW50723.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW101-20A5] >PMW54233.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW456-11-11-14-LB2] >PMW61732.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW306-07-L] >PMW74459.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW306-1C-G01A] >PMW76121.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-8] >PMW80394.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-12-1-14-LB3] >PMW90606.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-E13] >PMX76612.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW456-12-1-14-LB2] >PMX80365.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MPR-R2A2] >PMX93569.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-C3] >PMY18319.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW305-BF8] >PMY20060.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW460-13] >PMY24189.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. FW305-3-2-15-A-R2A1] >PNA48129.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. MPR-AND1A] >PNA54334.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Pseudomonas sp. GW101-3F01])

HSP 1 Score: 336.7 bits (862), Expect = 1.700e-88
Identity = 177/388 (45.62%), Postives = 235/388 (60.57%), Query Frame = 0
Query:  266 DRVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTC-GNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFG 652
            +++ +N PY+TG E   ++       L   G +T  C HW+E   GC+ ALLT S TAALE A LL  + PGDEVI+PS+TFVSTANA  LR A PVF+D+  D LN+D   +  A+T +TKAI+ VHY G +C+MD IMH+A++  L V+EDAAQ  +S YKGR LG+IG LG  SFH TKN + GEGGALLVN+P+    A IIREKGT+R+ F  G V KY W  +GSS++P EL +AFL  QL +A     RR  + D Y   LAPL  +G  R            ++ D C  N H++ ++   +  R+     +   +V  + H+VPLH S  G +YG+V  H S+E T   S CLLRLP+W G+       VV+VL    G
Sbjct:    4 EKILFNRPYMTGKELYYIAEAKFGNMLAGDGSFTKRCHHWIEQATGCNTALLTHSCTAALEMAALLLDVQPGDEVILPSYTFVSTANAFVLRGAIPVFVDIRKDTLNLDETLIEAAITPRTKAIVPVHYAGVSCEMDTIMHIARKHGLKVVEDAAQGVMSAYKGRALGSIGDLGAFSFHETKNVISGEGGALLVNEPQLSLRAEIIREKGTDRSRFFRGQVDKYTWQEVGSSFLPGELIAAFLWAQLEEATSITNRRLAIWDYYHTALAPLERKGLLR----------RPIVPDDCQHNAHMYYVLLAPSVDRQAVLEELKRNDVYAVFHYVPLHSSPAGQRYGRV--HGSMEVTNALSECLLRLPLWVGLTSEQQDKVVEVLARAVG 379          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: OGA39129.1 (dTDP-4-amino-4,6-dideoxygalactose transaminase [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13])

HSP 1 Score: 335.1 bits (858), Expect = 5.000e-88
Identity = 182/388 (46.91%), Postives = 234/388 (60.31%), Query Frame = 0
Query:  265 IDRVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFG 652
            ++++ +N P+  G E + ++R +    L   G YT  C  WLE  LGC KALLT S TAALE A +L  IGPGDEVIMPSFTFVSTANA  LR   PVFID+  D  N+D   +  AVT  T+AI+ VHY G  C+MD I  +A++K L VIEDAAQA LS +KGR  G IGHLGCLSFH TKN + GEGGALL+NDP+  + A +IREKGTNR+ F  G V KY W+ +GSSY+PSEL  AFL  QL  A     +R R+C AYR   A L   G  R  +  +D  G      T GNGH+F I+     +R      +  + V  + H+VPLH S  GMK+G+     ++  T   +  LLRLP++  +    +  +V  +   FG
Sbjct:    1 MNKIPFNKPFTIGAELENIARAVADGHLSGDGPYTKRCHLWLEERLGCRKALLTHSCTAALEMAAILADIGPGDEVIMPSFTFVSTANAFVLRGGVPVFIDIRSDTFNLDERLIEAAVTPATRAIVPVHYAGVPCEMDAIGAIAQKKGLLVIEDAAQALLSDHKGRRPGAIGHLGCLSFHETKNVISGEGGALLINDPKLVARAEVIREKGTNRSQFFRGEVDKYTWVDIGSSYLPSELVGAFLYAQLEHAEAITAKRLRLCAAYRSRFAKLEQAGVLRLPQ--ADPPG------TAGNGHMFYILLNDLATRTALIAYLKARGVHAVFHYVPLHSSPAGMKFGRA--AGAMTVTDDVAGRLLRLPLYYDITEEDVAAIVAEIVAFFG 378          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_046972620.1 (dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [Dyella japonica] >KLD62693.1 TDP-4-oxo-6-deoxy-D-glucose aminotransferase [Dyella japonica DSM 16301])

HSP 1 Score: 333.2 bits (853), Expect = 1.900e-87
Identity = 177/379 (46.70%), Postives = 238/379 (62.80%), Query Frame = 0
Query:  268 VQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTC-GNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQ 645
            + +N PY+TG E   ++    +++L   G +T  C  WLE   GC KALLT S TAALE A LL  + PGDEVIMPSFTFVSTANA  LR A PVF+D+  D LN+D A +  A+TS+T+AI VVHY G  C+MD IM +A+   L+V+EDAAQ  LS+YKGR LG+IGHL  LSFH TKN +CGEGGALLVNDPRF   A IIREKGTNR+ F  G V KY W+ +GSSY+PSE+ +AFL  QL  A+    +R  + + Y+   + L+ R              A  + D+C  N H++ ++ P  + R     AM  + VQ + H++ LH S  G +YG+      L  T + S  L+R+P+W G+   H+++V++
Sbjct:    2 IPFNKPYMTGGELGYIADAYGNRQLSGDGLFTRRCHEWLEQRTGCRKALLTHSCTAALEMAALLLDLQPGDEVIMPSFTFVSTANAFVLRGAVPVFVDIRPDTLNIDEALIEAAITSRTRAICVVHYAGVGCEMDAIMDIAERHGLWVVEDAAQGILSEYKGRPLGSIGHLAALSFHETKNIICGEGGALLVNDPRFVERAEIIREKGTNRSRFFRGQVDKYTWVDVGSSYLPSEILAAFLYAQLEMADAITQKRVALWNRYQAWFSGLSVRDV-----------TAPQIPDSCTHNAHIYYLLLPDLERRSAFIAAMKERGVQSVFHYLALHSSPAGRRYGR--HSGELAVTDSISERLVRMPLWLGLE-EHLEHVLE 366          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: WP_053424513.1 (dTDP-4-amino-4,6-dideoxygalactose transaminase [Rheinheimera sp. KL1] >KOO58155.1 TDP-4-oxo-6-deoxy-D-glucose aminotransferase [Rheinheimera sp. KL1])

HSP 1 Score: 332.8 bits (852), Expect = 2.500e-87
Identity = 178/382 (46.60%), Postives = 233/382 (60.99%), Query Frame = 0
Query:  267 RVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDV-GDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTC-GNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVL 647
            ++ +N PY+TG E   +SR     RL   G +T  C HW+E N GCS+ALLT S TAALE A LL  I PGDEVIMPS+TFVSTANA  LR A P+F+D+  D LN++   +  A+T +TKAI+ VHY G AC+MD IM +A++ +L+V+EDAAQ  +SKYKGR LG IG LG  SFH TKN + GEGGALLVN P F   A IIREKGT+R+ F  G V KY W S GSS++P EL +AFL  QL +A      R    + Y  LLAPL A G  R            ++   C  N H++ I+ P    R+     +  + +  + H+VPLH S  G + G+V  H ++ +T   SA L+RLP+W G+     + V  +L
Sbjct:    2 QILFNKPYITGKELYYISRAHEMGRLAGDGDFTANCHHWMEQNSGCSRALLTHSCTAALEMAALLLNIQPGDEVIMPSYTFVSTANAFVLRGAIPIFVDIRPDTLNINEKRIEAAITFRTKAIVPVHYAGVACEMDEIMAIARKHDLFVVEDAAQGVMSKYKGRALGGIGDLGAYSFHETKNVISGEGGALLVNRPDFVRQAEIIREKGTDRSRFFRGEVDKYTWQSAGSSFLPGELIAAFLWAQLQEAESITQTRLSAWNYYHELLAPLEALGLLR----------RPIIPTECQHNAHMYYILLPEQKDRQSVMDGLKAQQINTVFHYVPLHSSPAGQQLGRV--HGNMTNTDALSAQLIRLPLWIGISQTQQERVCSIL 371          
BLAST of NO20G00240 vs. NCBI_GenBank
Match: OGA76566.1 (dTDP-4-amino-4,6-dideoxygalactose transaminase [Burkholderiales bacterium GWE1_65_30] >OGA91482.1 dTDP-4-amino-4,6-dideoxygalactose transaminase [Burkholderiales bacterium GWF1_66_17])

HSP 1 Score: 332.0 bits (850), Expect = 4.200e-87
Identity = 180/387 (46.51%), Postives = 235/387 (60.72%), Query Frame = 0
Query:  267 RVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTVACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVSTANAVALRMATPVFIDVGDD-LNMDIAAVSEAVTSKTKAIMVVHYGGNACDMDNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVCGEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPSELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDRNGAAMLADTC-GNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLSQGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHFG 652
            ++ +N PY+TG E   ++   ++  L   G +T  C  WLE ++G  KALLT S TAALE A LL  I PGDEVIMPS+TFVSTANA  LR   PVF+D+ DD LN+D   +  AVT +TKAI+ VHY G AC+MD I+ +A   +L+VIEDAAQ FLS YKGR LG +G  G  SFH TKN + GEGGALL+ND R+   A IIREKGTNR+ F  G+V KY W+ +GSSY+P E+ +AFL  Q+ DA     RR  + D Y   LA L ARG  R            ++   C  N H++ ++  S ++R     AM  +++  + H+VPLH S  G KY +   H  L  T  A   LLRLP+W G+       V++VL+E  G
Sbjct:    2 KIPFNKPYMTGKELTYIAEAHSNGMLAGDGPFTKRCHAWLERSMGAPKALLTHSCTAALEMAALLADIQPGDEVIMPSYTFVSTANAFVLRGGVPVFVDIRDDTLNIDERLIEAAVTERTKAIVPVHYAGVACEMDAILDIAARHQLFVIEDAAQGFLSTYKGRPLGGLGQFGTYSFHETKNVISGEGGALLINDKRYVERAEIIREKGTNRSQFFRGAVDKYTWVDVGSSYLPGEVTAAFLWAQMEDAQVITDRRLAIWDKYHAALAGLEARGVLR----------RPIVPQECQHNAHMYHVLLDSLETRTRLIAAMRAQDIHPVFHYVPLHSSPAGRKYARC--HGELPITDLAGDRLLRLPLWTGLE-SQQDRVIEVLHEALG 375          
The following BLAST results are available for this feature:
BLAST of NO20G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQW94336.11.500e-9247.79dTDP-4-amino-4,6-dideoxygalactose transaminase [Be... [more]
WP_054915641.11.000e-8845.64MULTISPECIES: dTDP-4-amino-4,6-dideoxy-D-glucose t... [more]
WP_057267043.11.300e-8846.61dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [A... [more]
WP_058542058.11.300e-8845.64MULTISPECIES: dTDP-4-amino-4,6-dideoxy-D-glucose t... [more]
WP_078480283.11.700e-8845.64dTDP-4-amino-4,6-dideoxygalactose transaminase [Ps... [more]
WP_102595471.11.700e-8845.62MULTISPECIES: dTDP-4-amino-4,6-dideoxygalactose tr... [more]
OGA39129.15.000e-8846.91dTDP-4-amino-4,6-dideoxygalactose transaminase [Be... [more]
WP_046972620.11.900e-8746.70dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [D... [more]
WP_053424513.12.500e-8746.60dTDP-4-amino-4,6-dideoxygalactose transaminase [Rh... [more]
OGA76566.14.200e-8746.51dTDP-4-amino-4,6-dideoxygalactose transaminase [Bu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00240.1NO20G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671851gene_6234Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00240.1NO20G00240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00240 ID=NO20G00240|Name=NO20G00240|organism=Nannochloropsis oceanica|type=gene|length=2189bp
CACAGGAAAAGTGCTGGACTCATTGAAGACAAGGGTGGCTCATGTTGAAG
AGTTCATTGCCTGATGACTGGGTACACCTCCCCTTTGATACATCAGCCCT
CGGCGTGCGCACAGCTCTTTTGAAGAGTACAATTGAATTCTCACAGCTGC
GCAAAGTCATCAACACTTGTGCAAAGCAAGGCCTGGAATTGCTGTACTGG
ACTCCTGATTCAGATGTTGGGACTGTAATTCATAACCAAGAATGGTTCAC
AGGCTATGGCGTGGCCAAGGGAGTCGAGTTCAAGCTGCCGCTGGCAAACC
GTCACAGCGGCTCCACTTCACAGATCCCTTTAGAAATGAGTCCTGATTTC
TTCGTAGAGCCACTAGCTTCCATTGAGGAGGAAGATTTCTACGATCTCGT
GGATTTGGCCCTCATCGCTGGGCATCATTCTCGGTTTCGCCTGGACCCAG
CACTGACTCACGCCCAATTTAAGAGCCTATACAAGGCATGGTTGCAAAAT
TCCGTGACTAGGCAGGTAGCTGACCAGATTTTTGTGGCCCGTCGCAAGGA
AGATGGCAAGGCTACGGGATTCATCACCGTCAAGCTTGCTGTCGACAGAA
ATAGCGCTTCCATAGGCCTTTTGGGTGTCTCACCCTCATGCCAGCGTCAA
GGATTAGGGGCAGCCTTGATTTCCGCGGCTTGCGAATTTACCCAGAGCGC
AGACATCCCGCAAATCACTGTCCGGACGCAGGAAGATAATCATATGGCCA
TAAACTTCTACGGTGCTCAAGGCTTTATGCCCCATGATAACGGCCCGAAA
ACCACTTATCACATCTGGCTCACGCACCGCGTTATAGACCGAGTACAATA
TAATGTCCCGTACCTCACTGGCGATGAAGGAAAGGAAGTGTCGCGCCTCA
TCAATTCTCAAAGACTGGACAGTTTGGGTAGATATACTGTCGCGTGCGAA
CACTGGCTGGAGACGAATCTAGGATGCTCAAAGGCATTGCTAACCTTGTC
TGCCACCGCTGCCCTGGAGCAAGCAATATTGCTTTGTAAAATTGGCCCTG
GCGATGAGGTCATCATGCCATCCTTCACCTTTGTGTCCACAGCCAATGCT
GTGGCCTTACGCATGGCCACGCCGGTTTTCATAGACGTTGGGGATGACTT
GAACATGGACATCGCTGCAGTATCAGAGGCTGTGACTTCCAAGACGAAAG
CAATTATGGTGGTTCACTACGGGGGAAACGCTTGCGATATGGACAACATC
ATGCACTTGGCAAAGGAAAAGGAATTATATGTCATTGAAGATGCTGCGCA
AGCATTCCTCAGCAAGTACAAGGGCCGTTGCCTTGGTACAATTGGTCACT
TGGGATGTTTGTCATTCCATTACACAAAAAATACGGTGTGCGGAGAAGGT
GGGGCTCTACTCGTGAATGACCCTCGTTTCCATTCCCCAGCAGCAATAAT
CCGAGAAAAAGGCACTAATCGTGCAGACTTCATGCTCGGCAGCGTGAGCA
AGTACGAATGGATGTCCTTGGGTTCTTCTTACGTACCGTCGGAATTATGC
TCCGCGTTTCTTCTACCACAGCTCTTGGATGCAAACGAATCCGCTTATCG
ACGGAAGAGAGTCTGCGATGCCTACAGGGTATTATTGGCACCCTTGGCCG
CGCGCGGCTGTTTTCGATTTCTAAAGGTCCTGAGCGACCGGAATGGGGCT
GCTATGCTGGCCGATACATGTGGAAATGGGCACTTGTTTCCCATTATTTT
CCCCTCGACGGACAGTAGGAAGATGGCCCAGACGGCCATGACCACCAAAA
ATGTACAATGCCTGACGCATTTTGTTCCCTTGCACCTTTCCCAAGGTGGC
ATGAAATATGGAAAAGTGTGGCCGCACGCCTCTCTTGAAAGTACGATAAC
TGCATCGGCTTGTCTATTACGCCTTCCGGTATGGCCTGGAATGCGATTTG
GACATATCCAGTACGTCGTCCAGGTTCTGTACGAACACTTTGGCGAAGAT
TGTCCTTCCGTGACCACCGCTATGCATCTCTTCATGCCCACTACCTAGAA
TGCAACATGTGACGTACGACAACGACTTTTGTGGGGCGGACTCATTATTA
GGGCTTTTTTTGCTATAGATTTATTTGTCCACAAGCTGGCGTTTCAAATA
AAATGAAATTACATAAATGAAATGAAACTATATATATAT
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protein sequence of NO20G00240.1

>NO20G00240.1-protein ID=NO20G00240.1-protein|Name=NO20G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=669bp
MLKSSLPDDWVHLPFDTSALGVRTALLKSTIEFSQLRKVINTCAKQGLEL
LYWTPDSDVGTVIHNQEWFTGYGVAKGVEFKLPLANRHSGSTSQIPLEMS
PDFFVEPLASIEEEDFYDLVDLALIAGHHSRFRLDPALTHAQFKSLYKAW
LQNSVTRQVADQIFVARRKEDGKATGFITVKLAVDRNSASIGLLGVSPSC
QRQGLGAALISAACEFTQSADIPQITVRTQEDNHMAINFYGAQGFMPHDN
GPKTTYHIWLTHRVIDRVQYNVPYLTGDEGKEVSRLINSQRLDSLGRYTV
ACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVST
ANAVALRMATPVFIDVGDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDM
DNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVC
GEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPS
ELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDR
NGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLS
QGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHF
GEDCPSVTTAMHLFMPTT*
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Synonyms
Publications