NO18G02590, NO18G02590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02590 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 92.0 bits (227), Expect = 2.100e-15 Identity = 70/191 (36.65%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 1 MRRAFSLLALGITLALTAAEPAEPVLILSSIKAVDVDRANKDQWSAKGYIYDPDGLFVSAPPDAGMFAALEDGNDDFVNGVDFDAADCNALKNDRGIVCKTAGARVTAKRTNKVPKGVMIESQRNRNTTTMSSFYRLSAVFRRQEF-NNTLSSPLTAIFGISGVGEIEDSVSNCNE--REGARATKFLCTP 189 MR SLLALGITL T A L L SI+AVD NKD W KG I DP VSA G+ L+D D +N V F A+DC + R CK GARV+ K T++ PK ++ ++ + +Y ++ FR F N + SPLTA + + D+++ C R+ R T C P Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVD-ESVLSDTLTLCYNLPRKNGRNTISHCEP 189
BLAST of NO18G02590 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana]) HSP 1 Score: 90.9 bits (224), Expect = 4.700e-15 Identity = 63/177 (35.59%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 1 MRRAFSLLALGITLALTAAEPAEPVLILSSIKAVDVDRANKDQWSAKGYIYDPDGLFVSAPPDAGMFAALEDGNDDFVNGVDFDAADCNALKNDRGIVCKTAGARVTAKRTNKVPKGVMIESQRNRNTTTMSSFYRLSAVFRRQEF-NNTLSSPLTAIFGISGVGEIEDSVSNCNER 177 MRR SLLALG+TL +TA + L ++K + + +DQWS KG + +P V A G+ L D + D + F A +C L+N RG+ CK GARV+ KRT + PKG ++S N+ + +Y S +FRR +F + + +P+T + G + VS C+ER Sbjct: 37 MRRILSLLALGVTLVMTAGQE----FTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKVKSS---NSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKV-GSTTLPAIVSTCSER 204
BLAST of NO18G02590 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 89.0 bits (219), Expect = 1.800e-14 Identity = 66/191 (34.55%), Postives = 91/191 (47.64%), Query Frame = 0 Query: 1 MRRAFSLLALGITLALTAAEPAEPVLILSSIKAVDVDRANKDQWSAKGYIYDPDGLFVSAPPDAGMFAALEDGNDDFVNGVDFDAADCNALKNDRGIVCKTAGARVTAKRTNKVPKGVMIESQRNRNTTTMSSFYRLSAVFRRQEF-NNTLSSPLTAIFGISGVGEIEDSVSNCNE--REGARATKFLCTP 189 MR SLLALGITL T L L SI+AVD NKD W KG I DP V G+ L+D D +N V F A DC + + CK GARV K T++ PK ++ + + +Y ++ FRR F N + SPLTA ++ + D++++C + R+ R C P Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIK-TSRRPKINTPKTVHAKRYNSTGGYYSVTGTFRRLTFLENPVVSPLTAALTVN-ESVLSDTLTSCYDLPRKNGRNPITHCEP 257
BLAST of NO18G02590 vs. NCBI_GenBank
Match: EWM25644.1 (hypothetical protein Naga_100037g5 [Nannochloropsis gaditana]) HSP 1 Score: 69.7 bits (169), Expect = 1.100e-8 Identity = 55/184 (29.89%), Postives = 82/184 (44.57%), Query Frame = 0 Query: 24 PVLILSS--IKAVDVD--------RANKDQWSAKGYIYDPDGLFVSAPPDAGMFAALEDGNDDFVNGVDFDAADCNALKNDRGIVCKTAGARVTAKRTNKVPKGVMIESQRNRNTTTMSSFYRLSAVFRRQEF-NNTLSSPLTAIFGISGVGE----IEDSVSNCNE--REGARATKF-LCTPS 190 PVL+ +S I+ VD +A +D+W+ G+ DP V G+ A L+D ++ F C AL N RG+ CKT GAR+ K+T + RN ++ +FY++ VFRR F + +PLT IF + + C E + G + TK C PS Sbjct: 139 PVLVNNSTCIRVVDFHTDPSAKSFKAKRDRWTITGFFNDPAETAVVNIGQYGIIAVLQDAAKKALSSTFFTPPQCKALNNIRGVTCKTTGARLRLKKT---------KDPSVRNKSSEGAFYKVKGVFRRLTFLQQPVQTPLTTIFAVQFPNTTTVFTTSATEQCTEKGKTGGKKTKIDCCRPS 313 The following BLAST results are available for this feature:
BLAST of NO18G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02590 ID=NO18G02590|Name=NO18G02590|organism=Nannochloropsis oceanica|type=gene|length=1988bpback to top protein sequence of NO18G02590.1 >NO18G02590.1-protein ID=NO18G02590.1-protein|Name=NO18G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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