NO18G00270, NO18G00270 (gene) Nannochloropsis oceanica

Overview
NameNO18G00270
Unique NameNO18G00270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1605
Alignment locationchr18:96903..98507 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:96903..98507 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00270.1NO18G00270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00270.1NO18G00270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00270 ID=NO18G00270|Name=NO18G00270|organism=Nannochloropsis oceanica|type=gene|length=1605bp
ATGTTTCGCCAATCTGCCCTCCTCTTTGTGGCCCTCCTCTGTATGGCAGg
taagtaagagatggatgacactttaagggagttgtttggaaagacacggg
aggccacattgtgtcgtccagagctgctgattatttcctgtttctttcgc
tttatatttatgggacaggcagaagcaggtcgacagacactaaacttggc
cggaatcatcccccaccctatgaactaggacaatccatcacaacctcacc
aaccatgcatgcattcatcccaacagATGCCCAGTTCGAGGCCCTGACCG
CGAACAAGAACAAGACGGGCAACAAACACCCGAAAGGCGCTCACAACGAT
AAGACGAATCTGCGCAAGGTGACTGGCTTCAATCTCTGCACCCAGGAGTA
CGATGCCTACATTGGCGGGACAGGTGTCGCTGGTACGGGCGCATTTTCGT
ACCCCGTCTACCCTGGGGATTGTGCTGAGgtaggcaagggtaatcgaagc
attttttcctgtgaattattgttattcggccggatagaaaggtgcctggc
cctcaatgctcacctcagtacataccgtacaactaacactcacaactcac
aatcatcactggacaatacgcaattatcagGTAGACGACATGACCGAGGA
AATCGGCTCCTTGAGCGCCACATGCTCAAACAACCCGTACGAGGGCGTGA
CCTTCACCCTCACTCGCCAAGCAGTGGGACGTGCTGCACTTCTGGATGAC
ATTAGATCGCCTGGCATCAACTACAACCCAACTCCGCCTAATCAAGGAAA
TTTCGTCCAAGACTGGACTCCCCTTGACATTGGTGAAACTACCACTACTG
CACAGGTGCAGGCATCTGTGGATCAATTCTGCGTGGATCAACAAGGAACC
AAGTTTGCGCCTTTCAGTTCCAAGTGCTCCGCCGAGCTCCGCCTTAGCGG
CGATAACCGCAAGAATAAGCATCCAGGGAGCATCTTATCTTTCGACTTCA
CGACCAACACGACTTTAGTCCCCGgtacgttgttgtggcgattgatatga
atgcatgcatgttgcgtgttgggggaagggtacagattcgatgcatttga
tgtatgtggaaagggtgttaccttaattttaatccattaaccctacgtct
tgcaccataatcgggattctctttaacctctcctcccttcctcccttatt
ttccaacattctttccctgaagCTGGCGGCACCTACACATCCATCACTCA
ATATGGAATGGGTGGTGTTTGGACGACTAAATCTGCAAGCAGTGGAGGAT
TTTCAGTATCTTTCTCATTTGTTGACGTTGTAGAGCTCTTCGCTTACCAG
GTGATCGACACTGTCACGTGCGTTGCCCGGTCTAACACGATTGACACGAC
GTTCAGTAAGATCTATGGTGGAAGCGGCCGCTTTGAGAAGTACCCCGCCT
CCAAGGTGGCGTCGGTGGAGCTGGATACGATTCTGATTTTTTCTCCCGAT
GACGCAGCTAATCCTGAGAACACGTTCGAGACTGAAAGCCAGGTATGGAA
CACCCAGCTGGAAGTTAATTACGCGAAGAAGTACCTCGATTCCAGCATGC
TTTAA
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protein sequence of NO18G00270.1

>NO18G00270.1-protein ID=NO18G00270.1-protein|Name=NO18G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MFRQSALLFVALLCMADAQFEALTANKNKTGNKHPKGAHNDKTNLRKVTG
FNLCTQEYDAYIGGTGVAGTGAFSYPVYPGDCAEVDDMTEEIGSLSATCS
NNPYEGVTFTLTRQAVGRAALLDDIRSPGINYNPTPPNQGNFVQDWTPLD
IGETTTTAQVQASVDQFCVDQQGTKFAPFSSKCSAELRLSGDNRKNKHPG
SILSFDFTTNTTLVPAGGTYTSITQYGMGGVWTTKSASSGGFSVSFSFVD
VVELFAYQVIDTVTCVARSNTIDTTFSKIYGGSGRFEKYPASKVASVELD
TILIFSPDDAANPENTFETESQVWNTQLEVNYAKKYLDSSML*
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Synonyms
Publications