NO18G00260, NO18G00260 (gene) Nannochloropsis oceanica

Overview
NameNO18G00260
Unique NameNO18G00260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6447
Alignment locationchr18:89539..95985 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:89539..95985 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00260.1NO18G00260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00260.1NO18G00260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00260 ID=NO18G00260|Name=NO18G00260|organism=Nannochloropsis oceanica|type=gene|length=6447bp
TCGATGGGAATCATGCACGACTATGACTTATCACATGATTATCGACGACT
GTTGACGATTACCGTAACAATAAGTCGTACGGGCCATTTTGGCAGAAATG
TCGTCCAACGTGTGGTGCATACAAAATAGGAGTGCACGGCTAAAACTGTT
GGGAAATCTTGTTGCTTCCCATCAAACGAGTATGGCGATTGGCATAGATT
TCCCACACCATGCATGTATCGAGTACCGATAGCAGAGAGGAGAGACTTCT
TTTCATTCTCTCGCAGGCAAGTGTGGGGAAGAGAGTCACCGGCTGATTGA
AATACCACCCCACCTCAATGCGCTGCTAAATTCAGAAATAATTATACAAC
ATTATTCCTCTTCAGTGGATACCGAACGCGATAAGCCATGCTGGACCTCG
GCGGTCAGGCTGTATCCTAGGTCTGAGAAAATAGTAGTACCAGAAAGTCT
CGCTCAAACATGAGGACTTTCTATCATGCACAATCGCAGGACGGGACGAT
TAATGACTGACTACTACGTAGTATTGGTAGTTGTCGAATGTGTGATATCA
ACCGAGTCCCCCCCTCCCCGGAAAAAAAAAAACACACAAACCAAAAACTA
AAAACAAAAAACCAAAAAGCAAAGGCCAAAGGCCAGAAGCCAGAAGCCTT
AGATGAAAAACCAAAAACCAAAAATCAAAAACCAGAAAAAAAATGAGGAA
CAACGACAGTCTGGTTTTTAGTTTTTGAACCAGAAAGCAAAAACACCCAA
AAACCAAAAAACCAAAAACAACAATAAAACAGATCGTTTTTTTCCTGTTT
CTTCCAAGAATTTATCTTTCAGTTTGTGAGGTTTTTTGTTTCCCTATTTT
CTTCTTGTGCGCAACTATTTCTCTTTGATTTCTGTGTTTGTACACCACAT
AGTCCTTTGTCTGCATGCACTGCCTGTATGGCATTCAGCCCTCTAAAATG
CGTTAGGCCACTCATGCGACGCTCTTTTCTCTGGTCTGCAGTGCCGCATT
AGGGACTCCTCTAATCCCTTTTCTGTGTGTGTCAGGTAAAGGGGCATCCT
TCCTCATCTCCTTCTTCCATATGTTTCACCTGGTTCAAACAACGTACATA
ACTTTCTGTATGGCACACGTTGGACGACTACCGGTATAATCTAGTCGATC
ATTAGTCGTCCTGTCCTTCGATTATGCACGACTTATAGTCGTCGTAGTCG
TCCTCAATGGAAATCGCGCACGACTACGACTAATTACATGACTACGACGA
ATTTTGACGACTAATATAATAGTCAGTCGTACAGGCTATCTTTACAGAGT
AGTCGTCCAACTTTTGATCCTCTTTAAAATCGCTGGACAACGACAATTTA
CAGTGGTCGTGGTCATTGTGACGCCTACCTACACGTTGTATGTTGTCGTA
GGTCGATGAAAATATGGACTTATGTGATGACTGAATAGTCGTCACTCGAT
GAAAATCATGCACGACTACGACGACTTTTAGTCGTTCTCGATGGGAATCA
TGCACGACTACGACCAATCACATGACTATAGACGACTATTGACGACTATC
TCAACAATTAGTCGTGTAGGCCATTATTGCAGAATAGTCGTCCATTGAGT
GCTGTATTGTCCGTCCTATGGCAAGGTGTTGCGTTAGGCCAGAGTTTTCT
AGGTGTGTGGCAATAGTGCTGCATAGAGCCGAGGCCCATGGAACAGCACC
TGTCCCCACTCCTCTCAATGGTTATATAGGGCGAGAGACAAGAAAAGAAC
GCCCTTGAATCAAACTGCCCTCAACTCTCTACCGCCCCAGGCAGGGGCCA
TACACACGTACACAAACACCACTCTTTCAAACCCAACAATGCCTAAGTCA
GCCCCTGTGGTGCGTTGGTGCCCATGGGTCGTATCTTTTTCCTCTAAACC
GCAGCGCACAGATCGCCCCATCCTCCTGGGTATGCCTCGAGACGCCGACA
GATGGGGCATCACCAGCGATAACACACTGTCCTGCAGCCGAAAGTAACAG
ACAAAAGCTCACCAGAGATATTATTTCTCTATTCTTTTACACCCCTTTCT
CATAATGTGCACAGCCTTTTTTTGACTTCACTGCCAAGCTACCATGTTTC
GCCAATCTGCCCTCCTCTTTGTGGCCCTCCTCTGTATGGCAGgtaagtaa
gagatggatgacactttaagggagttgtttggaaagacacgggaggccac
attgtgtcgtccagagctgctgattatttcctgtttctttcgctttatat
ttatgggacaggcagaagcaggtcgacagacactaaacttggccggaatc
atcccccaccctatgaactaggacaatccatcacaacctcaccaaccatg
catgcattcatcccaacagATGCCCAGTTCGAGGCCCTGACCGCGAACAA
GAACAAGACGGGCAACAAACACCCGAAAGGCGCTCACAACGATAAGACGA
ATCTGCGCAAGGTGACTGGCTTCAATCTCTGCACCCAGGAGTACGATGCC
TACATTGGCGGGACAGGTGTCGCTGGTACGGGCGCATTTTCGTACCCCGT
CTACCCTGGGGATTGTGCTGAGgtaggcaagggtaatcgaagcatttttt
cctgtgaattattgttattcggccggatagaaaggtgcctggccctcaat
gctcacctcagtacataccgtacaactaacactcacaactcacaatcatc
actggacaatacgcaattatcagGTAGACGACATGACCGAGGAAATCGGC
TCCTTGAGCGCCACATGCTCAAACAACCCGTACGAGGGCGTGACCTTCAC
CCTCACTCGCCAAGCAGTGGGACGTGCTGCACTTCTGGATGACATTAGAT
CGCCTGGCATCAACTACAACCCAACTCCGCCTAATCAAGGAAATTTCGTC
CAAGACTGGACTCCCCTTGACATTGGTGAAACTACCACTACTGCACAGGT
GCAGGCATCTGTGGATCAATTCTGCGTGGATCAACAAGGAACCAAGTTTG
CGCCTTTCAGTTCCAAGTGCTCCGCCGAGCTCCGCCTTAGCGGCGATAAC
CGCAAGAATAAGCATCCAGGGAGCATCTTATCTTTCGACTTCACGACCAA
CACGACTTTAGTCCCCGgtacgttgttgtggcgattgatatgaatgcatg
catgttgcgtgttgggggaagggtacagattcgatgcatttgatgtatgt
ggaaagggtgttaccttaattttaatccattaaccctacgtcttgcacca
taatcgggattctctttaacctctcctcccttcctcccttattttccaac
attctttccctgaagCTGGCGGCACCTACACATCCATCACTCAATATGGA
ATGGGTGGTGTTTGGACGACTAAATCTGCAAGCAGTGGAGGATTTTCAGT
ATCTTTCTCATTTGTTGACGTTGTAGAGCTCTTCGCTTACCAGGTGATCG
ACACTGTCACGTGCGTTGCCCGGTCTAACACGATTGACACGACGTTCAGT
AAGATCTATGGTGGAAGCGGCCGCTTTGAGAAGTACCCCGCCTCCAAGGT
GGCGTCGGTGGAGCTGGATACGATTCTGATTTTTTCTCCCGATGACGCAG
CTAATCCTGAGAACACGTTCGAGACTGAAAGCCAGGTATGGAACACCCAG
CTGGAAGTTAATTACGCGAAGAAGTACCTCGATTCCAGCATGCTTTAAGG
GCCATAGGCATGACAGTTCTATGTCGGGGTTTGTGGGAGAAGACTTCGTT
TCTTCCTGCACTCCATTCCCCGGAAGACTAGCATGCTTTTTCGTGTAAGG
ATATCACGGTGTTTTGAGGGTATGTCTATGCCCGTGTTTCTGTGGTTTGT
GTCTGTTTTCTGTGTCTTGTCAGTCCAGTAAATCATAACAGGCTGCGTCC
TGTTATTGGCTTGCCTGGTAGATGGAGAGCACTACTTTATGTGAAGGGCC
ACTGTCCGTCGTCGTGAGCTCGAGGTACCACAGGTACCTGCGGTATGTAT
TTTGTGTTGTGTGGAACTAGGTCTGGGGTGTGTGTTTGGAAGAAGATCGC
TATGGTAGATCAACGTCTCTGTGGGGGCGTGAGCGTTGTGCCGGGAGAAT
GGAAGTATGCGGCGGATAAATGGCCCAAGAAACGAAGTATACAACGATAT
AGCGGATTTGAACTATATTCTTACTTGCGGTGTTAGCATAAAATCTTTTT
CCCATTCTTTCAGGCACATGCCGTTTTCTCCCTCTCTTTTCCCCATACTC
GTTCTTCTCTCTTTTTTCCTCTTACTGCTTTCTTTCTTCGCTATCAACTC
TTATCATCTTCATCTCAACCTCCTTCCCCCCCTCCTCGTCCTCCCCATCT
GCCATCAACGCCACTCTTATCCTGCTGCTGCCCCGCCTTCTTCTCCCCTA
CATGTCACAACATATACTCGATCCGCACATCGCAGGAGTGGACTACTACG
ACGACTACTAGTCGTGCACAATCGCAGGACGAGACGGTTAATGACTGACG
ACGTAATATTGGTAGTCGTCCACGACTCGAGTGCGAAGGTTGACGGGCTA
AGCAATCAAATCAAGAACTTTCTTGGTTTCATGCGGGCAAGGAAGAACAT
CCGAGAGTACAAGGGACACTTCCTTAATTGATTTTTAATCAAGGAAAAAG
AGTGAAAGGGAGGGAAACAAGGCTTAAAAGAGAAAAGACAGACGTGTCTT
TCATCTGTTGTGTGCACCATCAGCTTGATCTATTCCCTGTCTGTGGCCAG
ATCCAGCTCTCGAGAGATATGTAATGCAAGCTTTTTACATGGGGGATTCC
TACCAACAGTCGAAGTTCAGACCGTTGGGTGCCAGATTGGGTGCATACCA
CACGGCGGACGACTACCAGTATTATTTAGCCAATCATAAGTCGTCCTGTC
CTTCGATTATGCACGACTTATAGTCGTCACAGTCGCTGTCAATGTCAATT
ATGCATGACTACGACTTATCACATGACCATCGATCGACGACTTTTGACGA
CCATTACTTAAGCTAGTTCTACAGATCATCTTCACAGAGTATTCGTCCAA
CTTTTGATCCACTTAGCCACTGGACAACGGCAATTCACAGTCGTCATGGG
CGTTGTGACGCCTACCAACACGTTGTATGTTGTCGTAGGTCGATGAAAAT
ATGGACGAATGCGATGACTGAATAGTCGTCGATTGATGATTTTTATGCAT
GCATGACTGCGACGACTACTAGTCGTCGCTTGATAAAAATCATGCACGAC
TACGATGACTTTTAGTCGTCCTCGATGGGAATCATGCACGACTATGACTT
ATCACATGATTATCGACGACTGTTGACGATTACCGTAACAATAAGTCGTA
CGGGCCATTTTGGCAGAAATGTCGTCCAACGTGTGGTGCATACAAAATAG
GAGTGCACGGCTAAAACTGTTGGGAAATCTTGTTGCTTCCCATCAAACGA
GTATGGCGATTGGCATAGATTTCCCACACCATGCATGTATCGAGTACCGA
TAGCAGAGAGGAGAGACTTCTTTTCATTCTCTCGCAGGCAAGTGTGGGGA
AGAGAGTCACCGGCTGATTGAAATACCACCCCACCTCAATGCGCTGCTAA
ATTCAGAAATAATTATACAACATTATTCCTCTTCAGTGGATACCGAACGC
GATAAGCCATGCTGGACCTCGGCGGTCAGGCTGTATCCTAGGTCTGAGAA
AATAGTAGTACCAGAAAGTCTCGCTCAAACATGAGGACTTTCTATCATGC
ACAATCGCAGGACGGGACGATTAATGACTGACTACTACGTAGTATTGGTA
GTTGTCGAATGTGTGATATCAACCGAGTCCCCCCCTCCCCGGAAAAAAAA
AAACACACAAACCAAAAACTAAAAACAAAAAACCAAAAAGCAAAGGCCAA
AGGCCAGAAGCCAGAAGCCTTAGATGAAAAACCAAAAACCAAAAATCAAA
AACCAGAAAAAAAATGAGGAACAACGACAGTCTGGTTTTTAGTTTTTGAA
CCAGAAAGCAAAAACACCCAAAAACCAAAAAACCAAAAACAACAATAAAA
CAGATCGTTTTTTTCCTGTTTCTTCCAAGAATTTATCTTTCAGTTTGTGA
GGTTTTTTGTTTCCCTATTTTCTTCTTGTGCGCAACTATTTCTCTTTGAT
TTCTGTGTTTGTACACCACATAGTCCTTTGTCTGCATGCACTGCCTGTAT
GGCATTCAGCCCTCTAAAATGCGTTAGGCCACTCATGCGACGCTCTTTTC
TCTGGTCTGCAGTGCCGCATTAGGGACTCCTCTAATCCCTTTTCTGTGTG
TGTCAGGTAAGGGGGCATCCTTCCTCATCTCCTTCTTCCATATGTTTCAC
CTGGTTCAAACAACGTACATAACTTTCTGTATGGCACACGTTGGACGACT
ACCGGTATAATCTAGTCGATCATTAGTCGTCCTGTCCTTCGATTATG
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protein sequence of NO18G00260.1

>NO18G00260.1-protein ID=NO18G00260.1-protein|Name=NO18G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MFRQSALLFVALLCMADAQFEALTANKNKTGNKHPKGAHNDKTNLRKVTG
FNLCTQEYDAYIGGTGVAGTGAFSYPVYPGDCAEVDDMTEEIGSLSATCS
NNPYEGVTFTLTRQAVGRAALLDDIRSPGINYNPTPPNQGNFVQDWTPLD
IGETTTTAQVQASVDQFCVDQQGTKFAPFSSKCSAELRLSGDNRKNKHPG
SILSFDFTTNTTLVPAGGTYTSITQYGMGGVWTTKSASSGGFSVSFSFVD
VVELFAYQVIDTVTCVARSNTIDTTFSKIYGGSGRFEKYPASKVASVELD
TILIFSPDDAANPENTFETESQVWNTQLEVNYAKKYLDSSML*
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Synonyms
Publications