NO15G02920, NO15G02920 (gene) Nannochloropsis oceanica

Overview
NameNO15G02920
Unique NameNO15G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3313
Alignment locationchr15:795836..799148 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:795836..799148 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001287NSK001287Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02920.1NO15G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02920.1NO15G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02920 ID=NO15G02920|Name=NO15G02920|organism=Nannochloropsis oceanica|type=gene|length=3313bp
AGGGCGGGAAGGAAGAAGGGGGGAAGGGAGCCAATTGGTACGGGCACAGA
TCGGCTAGGCTCCACAGAGAGCAGATATTACCAGAAGGGAGGGATGGAAG
GTGGGGGGGCTAGGCCAAAACAAAGACAGTGGTGGCTGCAACCTCCTCCC
CACATGCGACCCTGATGCCGTCAGCACAGCCGACAAGATCCACCTCTTCA
TTCCCCTCGTTGAAGTCTTGATAGAGGGCGTGCTGACGATGGGGGCCCGG
CTTGCCGCCCTCCCTCCTTCCCTCCCGGGTGGGCGGGAGGAGGAGGAAGA
GGAAGAGAGGGCGTTGCACACGGCGGCGTATCACGCGTGTATGGAGCTGT
ATAAGGTCCATGGGATGCTTAGTGATGTGGGGGAGGCGCTGGGGGTGAAG
GGGAAGGAGGGGGAGAGTGCGTTGGAGGGAGGGAGGGAGAGGGAGAGGGG
GCTGGTTGGGATGGAGGGAGGGATGTACTTGTTGCAGCTGTTCGTGCTGA
CATGCCGGGGGATAGAGTGGGGAAGAGAGGGAGGGAAGGAGGGAAGGAGG
AAGGGGAGATGTGCGAGATGTAGGGAGGAGGAGAGGCGGTTTGCGTTGTG
GGGGCTGCGACATGCCGTGTTATCGTGTCGGAGGGCGTTGGAAAAAGAGG
GAGGGGGAGGAAAGGAGGGAGGACGAGGGGGGGGGCGTGCTCGAAAAGCG
AATGTGGGGTGCACCTCGTCTTCGGTGGCGGCGGCGGCTGAGGTGGAGGA
GGAGGAAGAGGGGGAGGAGGAGGGAGGGAGGGAGGGAGGGTTGAAGAGGA
TGGGCTCATTGAAGACGCTGTTGGTCGTCCTGGTTGATTTATACACACGT
ATACCCCACACGTTTGGTGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGA
AAAAGAGGATGGGGAGGGCAGGAAGGGGGGAAAAGAGGCGGAGGCATGGA
AGGGTGCGAGGAAGTCGCTTCCCTCCTCCTCCTCCTCCTCCTCGTCGTCG
TCGTCGTCTTCATGTGAGAATTGCCGAGCCATCGACAGAACAGCCGAGGC
CCGAAAACACCTTTTGGACACCACGGCCAAGGAAAGGGAGAAAGCATCCG
CCCTCCCTCTCTTCCTACCTCCCTCCTCGTCTTCCTCCTCATCCATCCTC
CATCCCCTCGACCCCCACGCCATTGCCGCCCTCCGTCGAAGCAGCAGCAG
CAGCAGCAGCATGAACGACGACGATAAAGGGAAGCAACGTCGTATTGACC
CTGCTCTTGCCCGTCGAAGAGCCCTCGCCTCCGTCACTCACTCCCTCTCC
CTCTCCTCCTCCTTCCTCGCCTCCGTGGACCCCAAATTCAGGTCTTTGGC
ATTGGAGAGGCTGGAAGAGGGAGCGAGGGAGCGAGGGTGGGAAGAAGGGT
TGATGGAGGCGAGGGTAGCCATACTGGACCTGATGAGGGTGGTAGTGAAA
ATGTGTCCGGTGGAAGCGTTTGCGGGTGAGGAGGAGGTCGAAGGAGGGAA
GGAGGAAGGCAGGAAGAGGGGAATGGAGGAGATTAAATTGGTAGGGTCGG
TGAAGGGGGAGAGCGAGGAGGAGGAGATGGATGAGGAGCAGGAAGAGGGG
GAGGACGAGGAGGGGAGAAGCATCGGGAGTGATGCTAGCAGCGGTGGCGA
GCTTATCCTTTCTGACAGCAGCAGCAGCAACAACAGTCCCATTAAGTCGA
CTGGAATAGCAGCAGCAGCAACAATAACAACAACAACAAACTCCTACTCC
TCCTCCTACTCCTACTCCTCCTCCTCCTCTCTGAAACTCAGCATCCCCTC
CCTACAAAAGACACCCCAGCCACCTGCCCCTTCCTTTGCACTCGCCTACC
ATGGGCTTCCTTCCCTTCTCCTCGCCCTCCTTCGAGACCTCCGCCTCGGC
CTCAAACACGGCCTCCCGCTTCGCCTTGTTCACTCCTATCTCGAGCTCTC
TTCCCTCCTTCTCACCTACCTTCCCCCCCTTCCTCCCTTCCTCCCTCCGT
CCTCCTCCTTGTACACATACCGCCTCACTCTCGCCCAGCTTCCCCTCATC
ATCCTCCGCGAGACCCCCTTCCTTCCTCAATCCCTCGTCCTGAAACGGCT
CTTGCGTCTTGGCCTCCAGGCCTGCCCCCTCCCTCATCTCCTCTTTCTCA
CTGACACCCTCATGGGCGCGGCCCTTCGTTATTTTTATGCCTGGATCCGA
GAGTCAGGAGGTGGAGGGAGAGGAAGAGAAGGAAGGAGGGCAGGAGAAGG
GGAGGTGATTACGGCGGCGGAGGCAAGGGAGATGCTGGAGGAGGAGGGGG
ATGAAGAGTTGTTCCCGGAAGGAGGAGTGGAGGACGAGGACGAGGACGAG
TGCGAGGAAAGTGACGATGCGTCATCGTCTGCGTCTTCGTGTTCGGAAGA
GAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGGAAGAGAAAAA
GGAGACGGCGAAGGCAAAAAGACAGGGGGGGAAAGAAGACGACGAAGGAG
AAGAAGGGAAAGGGAAAGAGGAATGTAACGGCGAAGCGAACGAAGGAAAA
TTCACCACCTCTAGTAGCAGCAGTAGAAGTGGCAGCAGCAGCAGATACTC
AAAGAAAGGAGGGAGAGCTTGAGGTGGAAATACACCCCCCTCTTACTCCT
CCTCCTCCTCCTCTTGTTGATCTCTCCTCCATCCGCTTCGCCTCTGTCTC
CTGCTGGCAAGTCACCGTCCTCTCCCTCCTCAACCACTTCGAAAGCCTTC
TTCTCCCCCCCTCCCTCCCTTCCCCCCCTTCCCCCTCGTTTTCCTCCCTC
CACCCGTCCTCCCTTCCTTCCTATCCCCTCCTGTTCTCCCACCTCCTGGC
CTTCTGCAAACCCATCGACGTCGGTTCAGGCGCCGCCTTCCAATCGAACG
GAAAGGGTGTCACCTACCGTGTCGCGGCCTGCTTCCTCCCTCCCTCACTC
AAGCTCCGCCTCCTCTCTTTTCTGTTGAAATTGTTTGGGGCCGTGCGATT
GGCGACGGGTAAGGTGCTGGGAAGGATGAGATGCCTCACGAAGAAGATAG
AGGAGGAGGAAGAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGA
GGAAGAGGGAGGGGAAGGAGAGAAAGTGCGTGGTACGTGAGAAGGAGAGG
AGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAGGGGACAAGAGGG
GCATGAAAAAGAAAAAGACGGGCAAGAAGAAGGAGAAGGAGGAGGAGGAG
GGCGGGAGCGAGGAAGGGATGAAGAGATCGAGTTGGTCCACGCCTATATG
CTTCATGGCATAG
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protein sequence of NO15G02920.1

>NO15G02920.1-protein ID=NO15G02920.1-protein|Name=NO15G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1025bp
MGARLAALPPSLPGGREEEEEEERALHTAAYHACMELYKVHGMLSDVGEA
LGVKGKEGESALEGGRERERGLVGMEGGMYLLQLFVLTCRGIEWGREGGK
EGRRKGRCARCREEERRFALWGLRHAVLSCRRALEKEGGGGKEGGRGGGR
ARKANVGCTSSSVAAAAEVEEEEEGEEEGGREGGLKRMGSLKTLLVVLVD
LYTRIPHTFGEEEEEEEEEEEKEDGEGRKGGKEAEAWKGARKSLPSSSSS
SSSSSSSSCENCRAIDRTAEARKHLLDTTAKEREKASALPLFLPPSSSSS
SSILHPLDPHAIAALRRSSSSSSSMNDDDKGKQRRIDPALARRRALASVT
HSLSLSSSFLASVDPKFRSLALERLEEGARERGWEEGLMEARVAILDLMR
VVVKMCPVEAFAGEEEVEGGKEEGRKRGMEEIKLVGSVKGESEEEEMDEE
QEEGEDEEGRSIGSDASSGGELILSDSSSSNNSPIKSTGIAAAATITTTT
NSYSSSYSYSSSSSLKLSIPSLQKTPQPPAPSFALAYHGLPSLLLALLRD
LRLGLKHGLPLRLVHSYLELSSLLLTYLPPLPPFLPPSSSLYTYRLTLAQ
LPLIILRETPFLPQSLVLKRLLRLGLQACPLPHLLFLTDTLMGAALRYFY
AWIRESGGGGRGREGRRAGEGEVITAAEAREMLEEEGDEELFPEGGVEDE
DEDECEESDDASSSASSCSEEREEEEEEEEEERRKRKRRRRRQKDRGGKK
TTKEKKGKGKRNVTAKRTKENSPPLVAAVEVAAAADTQRKEGELEVEIHP
PLTPPPPPLVDLSSIRFASVSCWQVTVLSLLNHFESLLLPPSLPSPPSPS
FSSLHPSSLPSYPLLFSHLLAFCKPIDVGSGAAFQSNGKGVTYRVAACFL
PPSLKLRLLSFLLKLFGAVRLATGKVLGRMRCLTKKIEEEEEEEGGREGG
REERGRGRGRRESAWYVRRRGGRRRRRRRRRRKGDKRGMKKKKTGKKKEK
EEEEGGSEEGMKRSSWSTPICFMA*
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Synonyms
Publications