NO14G02010, NO14G02010 (gene) Nannochloropsis oceanica

Overview
NameNO14G02010
Unique NameNO14G02010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2924
Alignment locationchr14:613395..616318 -

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Properties
Property NameValue
DescriptionBolA-like family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:613395..616318 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036065BolA-like_sf
IPR002634BolA
Homology
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_011350410.1 (PREDICTED: bolA-like protein DDB_G0274169 isoform X1 [Ooceraea biroi])

HSP 1 Score: 129.4 bits (324), Expect = 8.800e-27
Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 0 
Query:   38 GPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK 142
            GP + SI++KLQ AL P H  IINES  HNVPKGSETHFK+V +S  F  + L+ RHR++N +L+ EL TGVHALSIVAKT  +WE     V ASPACRGG  K
Sbjct:   39 GPTENSIREKLQVALKPLHCDIINESYMHNVPKGSETHFKIVVVSEKFNQQSLIKRHRMVNELLQAELQTGVHALSIVAKTPEQWEASSKVVTASPACRGGFGK 142
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_011350485.1 (PREDICTED: bolA-like protein DDB_G0274169 isoform X2 [Ooceraea biroi])

HSP 1 Score: 129.4 bits (324), Expect = 8.800e-27
Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 0 
Query:   38 GPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK 142
            GP + SI++KLQ AL P H  IINES  HNVPKGSETHFK+V +S  F  + L+ RHR++N +L+ EL TGVHALSIVAKT  +WE     V ASPACRGG  K
Sbjct:   32 GPTENSIREKLQVALKPLHCDIINESYMHNVPKGSETHFKIVVVSEKFNQQSLIKRHRMVNELLQAELQTGVHALSIVAKTPEQWEASSKVVTASPACRGGFGK 135
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_008910294.1 (hypothetical protein PPTG_15043 [Phytophthora parasitica INRA-310] >ETI39837.1 hypothetical protein F443_14606 [Phytophthora parasitica P1569] >ETN04367.1 hypothetical protein PPTG_15043 [Phytophthora parasitica INRA-310] >ETO68564.1 hypothetical protein F444_14619 [Phytophthora parasitica P1976])

HSP 1 Score: 128.6 bits (322), Expect = 1.500e-26
Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 0 
Query:   32 IMTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            IMT   GPV + I +KL  A TP HL +INES  HNVPKGSETHFKVV ++  F+GK L+ RHR++N +L++ELD GVHALSI++KT  +WE     V  SP CRGG
Sbjct:   14 IMTDTSGPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 119
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: ETP09683.1 (hypothetical protein F441_14476 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 128.6 bits (322), Expect = 1.500e-26
Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 0 
Query:   32 IMTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            IMT   GPV + I +KL  A TP HL +INES  HNVPKGSETHFKVV ++  F+GK L+ RHR++N +L++ELD GVHALSI++KT  +WE     V  SP CRGG
Sbjct:   14 IMTDTSGPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 119
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: ETK79943.1 (hypothetical protein L915_14239 [Phytophthora parasitica] >ETL33361.1 hypothetical protein L916_14144 [Phytophthora parasitica])

HSP 1 Score: 127.1 bits (318), Expect = 4.300e-26
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 0 
Query:   33 MTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            MT   GPV + I +KL  A TP HL +INES  HNVPKGSETHFKVV ++  F+GK L+ RHR++N +L++ELD GVHALSI++KT  +WE     V  SP CRGG
Sbjct:    1 MTDTSGPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 105
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: ETL86670.1 (hypothetical protein L917_13925 [Phytophthora parasitica] >ETM39842.1 hypothetical protein L914_14051 [Phytophthora parasitica] >KUF83907.1 BolA protein [Phytophthora nicotianae] >KUF89626.1 Peptidyl-prolyl cis-trans isomerase C [Phytophthora nicotianae])

HSP 1 Score: 127.1 bits (318), Expect = 4.300e-26
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 0 
Query:   33 MTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            MT   GPV + I +KL  A TP HL +INES  HNVPKGSETHFKVV ++  F+GK L+ RHR++N +L++ELD GVHALSI++KT  +WE     V  SP CRGG
Sbjct:    1 MTDTSGPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 105
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_011442392.1 (PREDICTED: uncharacterized protein LOC105338810 [Crassostrea gigas] >XP_011415921.1 PREDICTED: uncharacterized protein LOC105319896 [Crassostrea gigas])

HSP 1 Score: 126.7 bits (317), Expect = 5.700e-26
Identity = 63/101 (62.38%), Postives = 74/101 (73.27%), Query Frame = 0 
Query:   39 PVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGS 140
            P++ SI  KL     P HL++INESS HNVPKGSETHFKVV IS  FEG  L+ RHRL+N +LKEEL+ GVHALSIVAKT  +WE+    V  SP CRGG+
Sbjct:   22 PIENSICKKLTGKFQPQHLEVINESSKHNVPKGSETHFKVVVISDNFEGIPLIKRHRLVNEVLKEELENGVHALSIVAKTQVQWEESGQHVSKSPPCRGGT 122
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_013184646.1 (PREDICTED: bolA-like protein DDB_G0274169 isoform X2 [Amyelois transitella])

HSP 1 Score: 126.7 bits (317), Expect = 5.700e-26
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0 
Query:   38 GPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK 142
            GPV+ +I+DKL   LT  ++ +INES  HNVPKG+ETHFKVV +S  F+G  L+ RHRL+N +LKEEL TGVHALSI+AKT  +WE     V +SP CRGG  K
Sbjct:    6 GPVEGTIRDKLHSQLTATYVDVINESYMHNVPKGAETHFKVVVVSDKFDGLPLIKRHRLVNDVLKEELQTGVHALSIIAKTPQQWEISDKIVESSPNCRGGFGK 109
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: OWY96780.1 (hypothetical protein PHMEG_00032869 [Phytophthora megakarya])

HSP 1 Score: 126.7 bits (317), Expect = 5.700e-26
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 0 
Query:   33 MTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            MT   GPV + I +KL  A  P+HL +INES  HNVPKG+ETHFKVV ++  F+GK LL RHR++N +L++ELD GVHALSI++KT  +WE     +  SP+CRGG
Sbjct:    1 MTDTSGPVARRIHEKLLAAFAPSHLDVINESHMHNVPKGAETHFKVVVVTEQFDGKALLQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQIKPSPSCRGG 105
[Close]
BLAST of NO14G02010 vs. NCBI_GenBank
Match: XP_009530004.1 (hypothetical protein PHYSODRAFT_316294 [Phytophthora sojae] >EGZ16255.1 hypothetical protein PHYSODRAFT_316294 [Phytophthora sojae])

HSP 1 Score: 126.3 bits (316), Expect = 7.400e-26
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 0 
Query:   30 TNIMTIPCGPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGG 139
            T+  + P GPV + I +KL  A TP HL +INES  HNVP+G+ETHFKVV ++  F+GK LL RHR++N +L+EEL+ GVHALSI++KT  +WE     V  SP CRGG
Sbjct:    2 TDAASSPSGPVARRIHEKLLAAFTPTHLDVINESHMHNVPRGAETHFKVVVVAEQFDGKPLLQRHRMVNAVLQEELNDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 109
The following BLAST results are available for this feature:
BLAST of NO14G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_011350410.18.800e-2760.58PREDICTED: bolA-like protein DDB_G0274169 isoform ... [more]
XP_011350485.18.800e-2760.58PREDICTED: bolA-like protein DDB_G0274169 isoform ... [more]
XP_008910294.11.500e-2657.94hypothetical protein PPTG_15043 [Phytophthora para... [more]
ETP09683.11.500e-2657.94hypothetical protein F441_14476 [Phytophthora para... [more]
ETK79943.14.300e-2657.55hypothetical protein L915_14239 [Phytophthora para... [more]
ETL86670.14.300e-2657.55hypothetical protein L917_13925 [Phytophthora para... [more]
XP_011442392.15.700e-2662.38PREDICTED: uncharacterized protein LOC105338810 [C... [more]
XP_013184646.15.700e-2658.65PREDICTED: bolA-like protein DDB_G0274169 isoform ... [more]
OWY96780.15.700e-2655.66hypothetical protein PHMEG_00032869 [Phytophthora ... [more]
XP_009530004.17.400e-2655.05hypothetical protein PHYSODRAFT_316294 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02010.2NO14G02010.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G02010.1NO14G02010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590270gene_5773Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100171g3gene5877Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02010.2NO14G02010.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G02010.1NO14G02010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02010 ID=NO14G02010|Name=NO14G02010|organism=Nannochloropsis oceanica|type=gene|length=2924bp
GCAAGCTCTCGGTATACATTAGATCCGAGCTTCGAGCTTCTTCAGGTAAA
CTTTATGTTTCTTCTCATGCTTGCTTAATTACGTGTACATCCATTTCGTT
GAATTTTCCTTCCTCCTTATTGTAAGATCGCATCATCTCAAGTCCACGAC
GGCAAACGCTGAGTCTTCCCACATGACCGCGTGGTGGTTCTTGTAGATTT
GGGGGTCGGGCAGAGGATGAGGGTGGAAACCGCGTAGTTCGCACCTCTGA
ATAAGCTGCAAGCCCTCGGGTTCGGTCAGGCGGAAGACGCCCACTTCTGG
CTTCTGAGGATTGCACAGCGCGACGACCACGGCGACGGCTTCTGGCAACA
TGGTTTGATAGCCGCAATGCGTGTGGATGTCGACAGAAGACATGAAGCAC
TTCTGACTCGGGTGCGTATGGATCCAGCCAAGCTGCAGCAAATTCTTCCC
ATCTGCCGAACAGCAGTACCCAATGAGTTCCTCTTCGTGTGTCATGCCGA
CGGTGTCCGACGTGCCCTCTTGCTTGGGTATAATTAGAGTGGTGCAACGC
ATGAGCCCTGCCCCGTCTTGGACCCCAGCGAGAACACCGCATGTCTCGAT
GCCATCTGGTGGCTACGAGAAGGAGAGTAGATGAGAGAAGGAATGACATC
AGGGTTAATATGATCTTCATTGAGGCCCCATAGAATAATCCGAGGGAAAC
GACGAGAAAACGGAGTATGACAAGCATACATCCAACCACCCCTGTCATCA
CTCCTCCTCTCATCCCACCAGCACCGAAGCACGCACCTTCCTACTATTCG
CATCGGCAATCTCTAGAAACTTGCCCACCAGCCCACTCGGTAGCACCATC
CTCCTCAACATCCCCCTCTTCCTAAACCAAACCTCCTGCCCGGGGACCGC
AAACGGAGAAACCATCAACTCCCCCTTCTTCCCCTCCCCCTCCTCCTCCT
CCTCTTTCTCCTTCTTCTTCCCCCCCACAGGCGAGGAAAGACAAGGGTAG
TAATGCCGTACTCTCGGTGATGCAGGGTCATCCGCCTCCTCCAACCGCAA
GGAATTAAATGCGGTTTCGAGCTCAGTGGCGCTCAAGCCGCTCTTCACAC
TGTTGTCGGCGTCCACCGGAGGAAGAGGAGGGCCATCATCCAAAAACAAA
GGAGGCGCCGACGGCTCGAGCATCATGCTCCCAGATATGCTTGCCACTGA
CAACGGTGAATGTAGCTCGTCCTCGAGCAGGTGTCCAACCTCTCCCTCCT
TTCCTCGGCCCAGGGGACTGAGCAATCGCTTGCTAGACAAGGCATCCCAT
CCTCTTAAATGGCACAGGCGCCTTTCCAAGTCATCTTCCATAGCTTGGCC
TGGTGATGATGGAGGAGCGGCTGATGCAACGGGAGGGCAAGAAGGAGAAG
CCACACCTCGACAACAGCGCTCGGCGATTTCTGCTGTGATCGCGCCATTG
ACCTCTTCCAGTGCCTTAAGCGCCTGTCGACGCTCACCTACTAACCAGTT
CTTTTCACGGCCGAAAGTGGCTTCTTTGTAGGCAATGTGCTCGGGAATGC
AATCGAGGGCGAGGCGGAGGAAGCGCTTATAGAAAATGTAGGCCTGTTGG
Ggtacgtgcggtgtggtaggagggcagagggacggagaaaagatggtgtg
tgtttgaaagagttgatcatcccaaagcaaggaaaattttcccttcagac
atcattacgatcaaattattcctcattcagATACGGATTTATCTTCCCTA
TGCTTGATGTCGGCCGAAGGCATGCCTTTCCAACCCCTCCTTCCCTCCCA
GAAGGGAAGTGCGACGTACCCGATCGATGTCGCGCGATTCCCTGAATTGC
TGTGCCTGAGCCAGGACCTGCTTGCTCATCCCATAGTAAACACTGAGACG
GGTGCTGTCTTGAAGCTTGGGAACCTCCACATACCTATGTCAGGGAGGGA
GGAGGGAGGGTTTGATCATGCTTCCTACAACTCGCGGCAGCAGGTGACTG
CTCTTCTTTCTACGCACCTGTCCAGCTCCTTCAAATGGCGCTTGGAGAGC
TCCTCCACGACTGCACCAGCAGGCGACGCCACGGGCATTGGAGCCGTGTC
TGTGTATGAGGTGGATAAGGAGGGAGTGAGGGTGTGATGTAGTGGCGGCG
AGGCGGCCTTCCCTCCTGCCGTTGCGTCTATCTGATCTCAAATTACGTAT
ACCCGATTCCGACTGAAGCTTAAGgtactagactgattcctcaatgcttt
cattggcaaagcatgggcgcctggggggctatgctgacattgtctggcac
ttctgtgcacgaattcaacctccccactcctcactcctctacattcgcga
cactcaacacacaacagAGTCCAAAGAAAGCAGCACACCCAGGAGTACAG
CATCTTTCTCATCTGCACTCATACTAGCCTTGTCTCCTACATGTTATTCC
GCACCTCGGCGATCCTCGCAAGACATAGCTCAAGAACCCAGACCGCTGCA
GCTCTCCGTCATCTCAGTAGGAGCAGCACCAACATCATGACCATCCCTTG
CGGGCCAGTCCAAAAATCCATCCAAGACAAGCTCCAAGACGCCTTGACCC
CCGCCCATTTGCAGATCATCAACGAAAGCAGCAGTCACAACGTGCCCAAG
GGCTCGGAGACACATTTCAAGGTGGTGGCGATCTCGGCCTTGTTCGAAGG
CAAGGGTTTGCTAGCCCGGCATCGACTGATCAATGGGATTCTCAAAGAGG
AGTTAGACACGGGGGTACACGCCCTTTCGATTGTGGCTAAGACGGCATCG
GAGTGGGAGAAGGTGCAAGGCGCTGTGCCGGCCTCACCGGCCTGCAGAGG
GGGAAGCAAGAAATGAGGATAGGACGGAATGACGACAAAAAAGGAAATGA
AATGCAAAATCGATGTGTACTGGA
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protein sequence of NO14G02010.2

>NO14G02010.2-protein ID=NO14G02010.2-protein|Name=NO14G02010.2|organism=Nannochloropsis oceanica|type=polypeptide|length=142bp
MLFRTSAILARHSSRTQTAAALRHLSRSSTNIMTIPCGPVQKSIQDKLQD
ALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGI
LKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK*
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protein sequence of NO14G02010.1

>NO14G02010.1-protein ID=NO14G02010.1-protein|Name=NO14G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bp
MLFRTSAILARHSSRTQTAAALRHLSRSSTNIMTIPCGPVQKSIQDKLQD
ALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGI
LKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK*
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Synonyms
Publications