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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:613395..616318 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02010.1 vs.
Match: EWM24605.1 (BolA-like family protein [Nannochloropsis gaditana]) HSP 1 Score: 169.5 bits (428), Expect = 7.600e-39 Identity = 95/157 (60.51%), Postives = 112/157 (71.34%), Query Frame = 0
Query: 1 MLFRTSAILARHSSR-----TQTAAALRHLSRSSTNIM-TIPC----------GPVQKSIQDKLQDALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGILKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK 142
ML R + L R +R T +A +R S SS + + C GP+Q I+ KLQ AL PAHLQ+INES SHNVPKGSETHFKVVA+S++FEGK LLARHRLING+L EEL+ G+HALSIVAKTASEWEK +GAVP SPACRGGS+K
Sbjct: 1 MLGRVPSFLVRSCARAEAPITSSALPVRLQSPSSRTMSNSATCAKRDHSAQLGGPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02010.1 ID=NO14G02010.1|Name=NO14G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2652bp GCAAGCTCTCGGTATACATTAGATCCGAGCTTCGAGCTTCTTCAGGTAAA CTTTATGTTTCTTCTCATGCTTGCTTAATTACGTGTACATCCATTTCGTT GAATTTTCCTTCCTCCTTATTGTAAGATCGCATCATCTCAAGTCCACGAC GGCAAACGCTGAGTCTTCCCACATGACCGCGTGGTGGTTCTTGTAGATTT GGGGGTCGGGCAGAGGATGAGGGTGGAAACCGCGTAGTTCGCACCTCTGA ATAAGCTGCAAGCCCTCGGGTTCGGTCAGGCGGAAGACGCCCACTTCTGG CTTCTGAGGATTGCACAGCGCGACGACCACGGCGACGGCTTCTGGCAACA TGGTTTGATAGCCGCAATGCGTGTGGATGTCGACAGAAGACATGAAGCAC TTCTGACTCGGGTGCGTATGGATCCAGCCAAGCTGCAGCAAATTCTTCCC ATCTGCCGAACAGCAGTACCCAATGAGTTCCTCTTCGTGTGTCATGCCGA CGGTGTCCGACGTGCCCTCTTGCTTGGGTATAATTAGAGTGGTGCAACGC ATGAGCCCTGCCCCGTCTTGGACCCCAGCGAGAACACCGCATGTCTCGAT GCCATCTGGTGGCTACGAGAAGGAGAGTAGATGAGAGAAGGAATGACATC AGGGTTAATATGATCTTCATTGAGGCCCCATAGAATAATCCGAGGGAAAC GACGAGAAAACGGAGTATGACAAGCATACATCCAACCACCCCTGTCATCA CTCCTCCTCTCATCCCACCAGCACCGAAGCACGCACCTTCCTACTATTCG CATCGGCAATCTCTAGAAACTTGCCCACCAGCCCACTCGGTAGCACCATC CTCCTCAACATCCCCCTCTTCCTAAACCAAACCTCCTGCCCGGGGACCGC AAACGGAGAAACCATCAACTCCCCCTTCTTCCCCTCCCCCTCCTCCTCCT CCTCTTTCTCCTTCTTCTTCCCCCCCACAGGCGAGGAAAGACAAGGGTAG TAATGCCGTACTCTCGGTGATGCAGGGTCATCCGCCTCCTCCAACCGCAA GGAATTAAATGCGGTTTCGAGCTCAGTGGCGCTCAAGCCGCTCTTCACAC TGTTGTCGGCGTCCACCGGAGGAAGAGGAGGGCCATCATCCAAAAACAAA GGAGGCGCCGACGGCTCGAGCATCATGCTCCCAGATATGCTTGCCACTGA CAACGGTGAATGTAGCTCGTCCTCGAGCAGGTGTCCAACCTCTCCCTCCT TTCCTCGGCCCAGGGGACTGAGCAATCGCTTGCTAGACAAGGCATCCCAT CCTCTTAAATGGCACAGGCGCCTTTCCAAGTCATCTTCCATAGCTTGGCC TGGTGATGATGGAGGAGCGGCTGATGCAACGGGAGGGCAAGAAGGAGAAG CCACACCTCGACAACAGCGCTCGGCGATTTCTGCTGTGATCGCGCCATTG ACCTCTTCCAGTGCCTTAAGCGCCTGTCGACGCTCACCTACTAACCAGTT CTTTTCACGGCCGAAAGTGGCTTCTTTGTAGGCAATGTGCTCGGGAATGC AATCGAGGGCGAGGCGGAGGAAGCGCTTATAGAAAATGTAGGCCTGTTGG GATACGGATTTATCTTCCCTATGCTTGATGTCGGCCGAAGGCATGCCTTT CCAACCCCTCCTTCCCTCCCAGAAGGGAAGTGCGACGTACCCGATCGATG TCGCGCGATTCCCTGAATTGCTGTGCCTGAGCCAGGACCTGCTTGCTCAT CCCATAGTAAACACTGAGACGGGTGCTGTCTTGAAGCTTGGGAACCTCCA CATACCTATGTCAGGGAGGGAGGAGGGAGGGTTTGATCATGCTTCCTACA ACTCGCGGCAGCAGGTGACTGCTCTTCTTTCTACGCACCTGTCCAGCTCC TTCAAATGGCGCTTGGAGAGCTCCTCCACGACTGCACCAGCAGGCGACGC CACGGGCATTGGAGCCGTGTCTGTGTATGAGGTGGATAAGGAGGGAGTGA GGGTGTGATGTAGTGGCGGCGAGGCGGCCTTCCCTCCTGCCGTTGCGTCT ATCTGATCTCAAATTACGTATACCCGATTCCGACTGAAGCTTAAGAGTCC AAAGAAAGCAGCACACCCAGGAGTACAGCATCTTTCTCATCTGCACTCAT ACTAGCCTTGTCTCCTACATGTTATTCCGCACCTCGGCGATCCTCGCAAG ACATAGCTCAAGAACCCAGACCGCTGCAGCTCTCCGTCATCTCAGTAGGA GCAGCACCAACATCATGACCATCCCTTGCGGGCCAGTCCAAAAATCCATC CAAGACAAGCTCCAAGACGCCTTGACCCCCGCCCATTTGCAGATCATCAA CGAAAGCAGCAGTCACAACGTGCCCAAGGGCTCGGAGACACATTTCAAGG TGGTGGCGATCTCGGCCTTGTTCGAAGGCAAGGGTTTGCTAGCCCGGCAT CGACTGATCAATGGGATTCTCAAAGAGGAGTTAGACACGGGGGTACACGC CCTTTCGATTGTGGCTAAGACGGCATCGGAGTGGGAGAAGGTGCAAGGCG CTGTGCCGGCCTCACCGGCCTGCAGAGGGGGAAGCAAGAAATGAGGATAG GACGGAATGACGACAAAAAAGGAAATGAAATGCAAAATCGATGTGTACTG GA back to topprotein sequence of NO14G02010.1 >NO14G02010.1-protein ID=NO14G02010.1-protein|Name=NO14G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bp MLFRTSAILARHSSRTQTAAALRHLSRSSTNIMTIPCGPVQKSIQDKLQD ALTPAHLQIINESSSHNVPKGSETHFKVVAISALFEGKGLLARHRLINGI LKEELDTGVHALSIVAKTASEWEKVQGAVPASPACRGGSKK* back to topmRNA from alignment at chr14:613395..616318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02010.1 ID=NO14G02010.1|Name=NO14G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2924bp|location=Sequence derived from alignment at chr14:613395..616318- (Nannochloropsis oceanica) GCAAGCTCTCGGTATACATTAGATCCGAGCTTCGAGCTTCTTCAGGTAAA
CTTTATGTTTCTTCTCATGCTTGCTTAATTACGTGTACATCCATTTCGTT
GAATTTTCCTTCCTCCTTATTGTAAGATCGCATCATCTCAAGTCCACGAC
GGCAAACGCTGAGTCTTCCCACATGACCGCGTGGTGGTTCTTGTAGATTT
GGGGGTCGGGCAGAGGATGAGGGTGGAAACCGCGTAGTTCGCACCTCTGA
ATAAGCTGCAAGCCCTCGGGTTCGGTCAGGCGGAAGACGCCCACTTCTGG
CTTCTGAGGATTGCACAGCGCGACGACCACGGCGACGGCTTCTGGCAACA
TGGTTTGATAGCCGCAATGCGTGTGGATGTCGACAGAAGACATGAAGCAC
TTCTGACTCGGGTGCGTATGGATCCAGCCAAGCTGCAGCAAATTCTTCCC
ATCTGCCGAACAGCAGTACCCAATGAGTTCCTCTTCGTGTGTCATGCCGA
CGGTGTCCGACGTGCCCTCTTGCTTGGGTATAATTAGAGTGGTGCAACGC
ATGAGCCCTGCCCCGTCTTGGACCCCAGCGAGAACACCGCATGTCTCGAT
GCCATCTGGTGGCTACGAGAAGGAGAGTAGATGAGAGAAGGAATGACATC
AGGGTTAATATGATCTTCATTGAGGCCCCATAGAATAATCCGAGGGAAAC
GACGAGAAAACGGAGTATGACAAGCATACATCCAACCACCCCTGTCATCA
CTCCTCCTCTCATCCCACCAGCACCGAAGCACGCACCTTCCTACTATTCG
CATCGGCAATCTCTAGAAACTTGCCCACCAGCCCACTCGGTAGCACCATC
CTCCTCAACATCCCCCTCTTCCTAAACCAAACCTCCTGCCCGGGGACCGC
AAACGGAGAAACCATCAACTCCCCCTTCTTCCCCTCCCCCTCCTCCTCCT
CCTCTTTCTCCTTCTTCTTCCCCCCCACAGGCGAGGAAAGACAAGGGTAG
TAATGCCGTACTCTCGGTGATGCAGGGTCATCCGCCTCCTCCAACCGCAA
GGAATTAAATGCGGTTTCGAGCTCAGTGGCGCTCAAGCCGCTCTTCACAC
TGTTGTCGGCGTCCACCGGAGGAAGAGGAGGGCCATCATCCAAAAACAAA
GGAGGCGCCGACGGCTCGAGCATCATGCTCCCAGATATGCTTGCCACTGA
CAACGGTGAATGTAGCTCGTCCTCGAGCAGGTGTCCAACCTCTCCCTCCT
TTCCTCGGCCCAGGGGACTGAGCAATCGCTTGCTAGACAAGGCATCCCAT
CCTCTTAAATGGCACAGGCGCCTTTCCAAGTCATCTTCCATAGCTTGGCC
TGGTGATGATGGAGGAGCGGCTGATGCAACGGGAGGGCAAGAAGGAGAAG
CCACACCTCGACAACAGCGCTCGGCGATTTCTGCTGTGATCGCGCCATTG
ACCTCTTCCAGTGCCTTAAGCGCCTGTCGACGCTCACCTACTAACCAGTT
CTTTTCACGGCCGAAAGTGGCTTCTTTGTAGGCAATGTGCTCGGGAATGC
AATCGAGGGCGAGGCGGAGGAAGCGCTTATAGAAAATGTAGGCCTGTTGG
GGTACGTGCGGTGTGGTAGGAGGGCAGAGGGACGGAGAAAAGATGGTGTG
TGTTTGAAAGAGTTGATCATCCCAAAGCAAGGAAAATTTTCCCTTCAGAC
ATCATTACGATCAAATTATTCCTCATTCAGATACGGATTTATCTTCCCTA
TGCTTGATGTCGGCCGAAGGCATGCCTTTCCAACCCCTCCTTCCCTCCCA
GAAGGGAAGTGCGACGTACCCGATCGATGTCGCGCGATTCCCTGAATTGC
TGTGCCTGAGCCAGGACCTGCTTGCTCATCCCATAGTAAACACTGAGACG
GGTGCTGTCTTGAAGCTTGGGAACCTCCACATACCTATGTCAGGGAGGGA
GGAGGGAGGGTTTGATCATGCTTCCTACAACTCGCGGCAGCAGGTGACTG
CTCTTCTTTCTACGCACCTGTCCAGCTCCTTCAAATGGCGCTTGGAGAGC
TCCTCCACGACTGCACCAGCAGGCGACGCCACGGGCATTGGAGCCGTGTC
TGTGTATGAGGTGGATAAGGAGGGAGTGAGGGTGTGATGTAGTGGCGGCG
AGGCGGCCTTCCCTCCTGCCGTTGCGTCTATCTGATCTCAAATTACGTAT
ACCCGATTCCGACTGAAGCTTAAGGTACTAGACTGATTCCTCAATGCTTT
CATTGGCAAAGCATGGGCGCCTGGGGGGCTATGCTGACATTGTCTGGCAC
TTCTGTGCACGAATTCAACCTCCCCACTCCTCACTCCTCTACATTCGCGA
CACTCAACACACAACAGAGTCCAAAGAAAGCAGCACACCCAGGAGTACAG
CATCTTTCTCATCTGCACTCATACTAGCCTTGTCTCCTACATGTTATTCC
GCACCTCGGCGATCCTCGCAAGACATAGCTCAAGAACCCAGACCGCTGCA
GCTCTCCGTCATCTCAGTAGGAGCAGCACCAACATCATGACCATCCCTTG
CGGGCCAGTCCAAAAATCCATCCAAGACAAGCTCCAAGACGCCTTGACCC
CCGCCCATTTGCAGATCATCAACGAAAGCAGCAGTCACAACGTGCCCAAG
GGCTCGGAGACACATTTCAAGGTGGTGGCGATCTCGGCCTTGTTCGAAGG
CAAGGGTTTGCTAGCCCGGCATCGACTGATCAATGGGATTCTCAAAGAGG
AGTTAGACACGGGGGTACACGCCCTTTCGATTGTGGCTAAGACGGCATCG
GAGTGGGAGAAGGTGCAAGGCGCTGTGCCGGCCTCACCGGCCTGCAGAGG
GGGAAGCAAGAAATGAGGATAGGACGGAATGACGACAAAAAAGGAAATGA
AATGCAAAATCGATGTGTACTGGA back to topCoding sequence (CDS) from alignment at chr14:613395..616318- >NO14G02010.1 ID=NO14G02010.1|Name=NO14G02010.1|organism=Nannochloropsis oceanica|type=CDS|length=426bp|location=Sequence derived from alignment at chr14:613395..616318- (Nannochloropsis oceanica) ATGTTATTCCGCACCTCGGCGATCCTCGCAAGACATAGCTCAAGAACCCA GACCGCTGCAGCTCTCCGTCATCTCAGTAGGAGCAGCACCAACATCATGA CCATCCCTTGCGGGCCAGTCCAAAAATCCATCCAAGACAAGCTCCAAGAC GCCTTGACCCCCGCCCATTTGCAGATCATCAACGAAAGCAGCAGTCACAA CGTGCCCAAGGGCTCGGAGACACATTTCAAGGTGGTGGCGATCTCGGCCT TGTTCGAAGGCAAGGGTTTGCTAGCCCGGCATCGACTGATCAATGGGATT CTCAAAGAGGAGTTAGACACGGGGGTACACGCCCTTTCGATTGTGGCTAA GACGGCATCGGAGTGGGAGAAGGTGCAAGGCGCTGTGCCGGCCTCACCGG CCTGCAGAGGGGGAAGCAAGAAATGA back to top
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