NO14G01730, NO14G01730 (gene) Nannochloropsis oceanica

Overview
NameNO14G01730
Unique NameNO14G01730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2737
Alignment locationchr14:532661..535397 -

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Properties
Property NameValue
DescriptionChaperonin Cpn60/TCP-1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:532661..535397 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0042026protein refolding
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR027410TCP-1-like_intermed
IPR027413GROEL-like_equatorial
IPR002423Cpn60/TCP-1
IPR001844Chaprnin_Cpn60
Homology
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: OWZ14546.1 (Chaperonin GroL [Phytophthora megakarya])

HSP 1 Score: 619.8 bits (1597), Expect = 6.800e-174
Identity = 319/419 (76.13%), Postives = 368/419 (87.83%), Query Frame = 0 
Query:   19 RGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            R  + GKD+RFGVEGRA ML G D+LA+AVQVT+GPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S+ V  K +V+QV TISAN E  IG L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+QS+IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T DMLG++KKVT++KDDTL+L G G+ EA++ER  LL+ SI AT SDYEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   21 RLFSSGKDIRFGVEGRAAMLKGADQLANAVQVTMGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSKDVADKEKVAQVATISANSETEIGSLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQSIIPMLEAVVKEQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPDMLGSAKKVTITKDDTLMLDGAGSAEAVEERGNLLRSSIDATTSDYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 439
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BLAST of NO14G01730 vs. NCBI_GenBank
Match: CCI46088.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 619.4 bits (1596), Expect = 8.900e-174
Identity = 318/436 (72.94%), Postives = 380/436 (87.16%), Query Frame = 0 
Query:    2 LRQILRRAPTRALTVQMRGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            +++ L +  TRA  V  R  A GKD+RFGVEGRA ML G D+L +AV+VT+GPKGRN +IDQ +GAPKITKDGVTVAK+I+FK++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCKAVAAG+NP DLRRG +LAVDHVV+ L  IS+ V  K +++QV TISAN EK +G+L+++AMERVGKEGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+TDNK Q+ ELENP+ILLVEKK++++QS++P+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AV+TG  VISE+LG ++E  + DMLGT+KKVT++KDDTL+L G G  E+++ERC LL+ SI +T SDYEKEKLQERLAKLSGGVAVIKVGG SEVEVNEKKDRVVDALNATRAAV +GIVPGGG
Sbjct:    9 IKKSLMQHATRA--VARRSFASGKDIRFGVEGRALMLKGADQLTNAVEVTMGPKGRNVVIDQSYGAPKITKDGVTVAKNIDFKDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKAVAAGMNPTDLRRGIKLAVDHVVEELQKISQDVADKQKIAQVATISANSEKEVGNLISEAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTDNKNQSCELENPFILLVEKKVSTLQSILPVLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVMTGATVISEELGHRLETTSVDMLGTAKKVTITKDDTLMLDGAGTPESVEERCDLLRGSIDSTTSDYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVAEGIVPGGG 442
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BLAST of NO14G01730 vs. NCBI_GenBank
Match: CCA20827.1 (mitochondriatargeted chaperonin putative [Albugo laibachii Nc14])

HSP 1 Score: 617.8 bits (1592), Expect = 2.600e-173
Identity = 316/436 (72.48%), Postives = 380/436 (87.16%), Query Frame = 0 
Query:    2 LRQILRRAPTRALTVQMRGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            +++ L +  TRA  V  R  A GKD+RFGVEGRA ML G D+L +AV+VT+GPKGRN +IDQ FGAPKITKDGVTVAK+I+FK++F NMGA L+RQVA+ TND AGDGTT+ATVLTRAI+SEGCKAVAAG+NP DLRRG +LAVDHVV+ L  IS+ V  K +++QV TISAN EK +G+L+++AMERVGKEGVITVQDGKTL+NELEVVEGMKFDRGYISPYF+TDNK Q  ELENP+ILLVEKK++++QS++P+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AV+TG  V+SE+LG ++E  + DMLGT+KKVT++KDDTL+L G G+ E+++ERC LL+ +I +T S+YEKEKLQERLAKLSGGVAVIKVGG SEVEVNEKKDRVVDALNATRAAV +GIVPGGG
Sbjct:    9 MKKSLMQHATRA--VARRSFASGKDIRFGVEGRALMLKGADQLTNAVEVTMGPKGRNVVIDQSFGAPKITKDGVTVAKNIDFKDKFENMGAQLLRQVANNTNDAAGDGTTSATVLTRAIYSEGCKAVAAGMNPTDLRRGIKLAVDHVVEELQKISQDVADKQKIAQVATISANSEKEVGNLISEAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGYISPYFVTDNKNQTCELENPFILLVEKKVSTLQSILPVLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVMTGATVVSEELGHRLETTSVDMLGTAKKVTITKDDTLMLDGAGSPESVEERCDLLRGTIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVAEGIVPGGG 442
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: XP_008894090.1 (chaperonin GroL [Phytophthora parasitica INRA-310] >ETI41692.1 chaperonin GroL [Phytophthora parasitica P1569] >ETK81723.1 chaperonin GroL [Phytophthora parasitica] >ETL35126.1 chaperonin GroL [Phytophthora parasitica] >ETL88368.1 chaperonin GroL [Phytophthora parasitica] >ETM41616.1 chaperonin GroL [Phytophthora parasitica] >ETN20081.1 chaperonin GroL [Phytophthora parasitica INRA-310] >ETO70315.1 chaperonin GroL [Phytophthora parasitica P1976] >ETP11424.1 chaperonin GroL [Phytophthora parasitica CJ01A1] >ETP39556.1 chaperonin GroL [Phytophthora parasitica P10297])

HSP 1 Score: 615.5 bits (1586), Expect = 1.300e-172
Identity = 317/419 (75.66%), Postives = 368/419 (87.83%), Query Frame = 0 
Query:   19 RGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            R  + GKD+RFGVEGRA ML G D+LA+AVQVT+GPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S  V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQA E+ENPYILLVEKK++S+Q++IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T +MLG++KKVTV+KDDTL+L G G+ EA++ER  LL+ SI +T S+YEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   43 RLFSSGKDIRFGVEGRAAMLKGADQLANAVQVTMGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSMDVADKEKVAQVATISANSETEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQACEMENPYILLVEKKVSSLQAIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPEMLGSAKKVTVTKDDTLMLDGAGSAEAVEERSNLLRASIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 461
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: KUF85566.1 (Chaperonin CPN60-1 [Phytophthora nicotianae] >KUF98213.1 phosphomutase PMU1 [Phytophthora nicotianae])

HSP 1 Score: 615.5 bits (1586), Expect = 1.300e-172
Identity = 317/419 (75.66%), Postives = 368/419 (87.83%), Query Frame = 0 
Query:   19 RGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            R  + GKD+RFGVEGRA ML G D+LA+AVQVT+GPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S  V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQA E+ENPYILLVEKK++S+Q++IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T +MLG++KKVTV+KDDTL+L G G+ EA++ER  LL+ SI +T S+YEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   21 RLFSSGKDIRFGVEGRAAMLKGADQLANAVQVTMGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSMDVADKEKVAQVATISANSETEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQACEMENPYILLVEKKVSSLQAIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPEMLGSAKKVTVTKDDTLMLDGAGSAEAVEERSNLLRASIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 439
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: XP_024574876.1 (chaperonin [Plasmopara halstedii] >CEG38507.1 chaperonin [Plasmopara halstedii])

HSP 1 Score: 615.1 bits (1585), Expect = 1.700e-172
Identity = 318/419 (75.89%), Postives = 368/419 (87.83%), Query Frame = 0 
Query:   19 RGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            R  + GKD+RFGVEGRA ML G D+LA+AVQVTLGPKGRN +IDQ +GAPKITKDGVTVA+S+EFK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S  V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+Q++IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T +MLG++KKVTV+KDDTL+L G G+ EA++ER  LL+ SI +T S+YEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   21 RLFSSGKDIRFGVEGRAAMLKGADQLANAVQVTLGPKGRNVVIDQSYGAPKITKDGVTVARSVEFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSMDVADKEKVAQVATISANSEAEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQAIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPEMLGSAKKVTVTKDDTLMLDGAGSPEAVEERGNLLRASIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 439
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: POM73512.1 (Chaperonin GroL [Phytophthora palmivora var. palmivora])

HSP 1 Score: 614.4 bits (1583), Expect = 2.900e-172
Identity = 315/414 (76.09%), Postives = 367/414 (88.65%), Query Frame = 0 
Query:   24 GKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            GKD+RFGVEGRA ML G D+LA+AVQVT+GPKGRN +IDQ +GAPKITKDGVTVA+S++FK++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S+ V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+Q++IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T +MLG++KKVTV+KDDTL+L G G+ EA++ER  LL+ SI +T S+YEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   24 GKDIRFGVEGRAAMLKGADQLANAVQVTMGPKGRNVVIDQSYGAPKITKDGVTVARSVDFKDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSKDVADKEKVAQVATISANSETEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQAIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPEMLGSAKKVTVTKDDTLMLDGAGSPEAVEERGNLLRASIESTTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 437
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: XP_002176830.1 (mitochondria-targeted chaperonin [Phaeodactylum tricornutum CCAP 1055/1] >EEC51293.1 mitochondria-targeted chaperonin [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 613.2 bits (1580), Expect = 6.400e-172
Identity = 324/442 (73.30%), Postives = 378/442 (85.52%), Query Frame = 0 
Query:    1 MLRQILRRAPTRALT-----VQMRGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            ML   + RA +R+LT       +RG A  K ++FGVEGRA ML GVD LADAVQVTLGPKGRNAII QP+G PKITKDGVTVAKSI+F+++F +MGA L++ VASKTNDIAGDGTTTATVL RAI+SEGCKAVAAGLNP+DLRRG QLAV+ VVK L +ISR ++SKAEVSQVGTISAN ++ IGDL+ADAMERVGKEGVITVQDGKTL N L+VVEGMKF+RG+ISPYFITD KTQ  ELENP ILLVEKK++++Q L+PLLE V+K+Q  LLI+AEDVESEALATLVVNKLRAGIKV AVKAPGFGDNRKAT+QD+A+LTGG VISE++G+K+E      LG  KKVTV+K++T++L G G + +I ERC L+++ I  T SDYE+EKLQERLAKLSGGVAVI+VGG SEVEV EKKDRVVDALNATRAAVE+GIVPGGG
Sbjct:    1 MLSSSISRAASRSLTGRTNLTSVRGFA--KQIKFGVEGRAAMLRGVDTLADAVQVTLGPKGRNAIIAQPYGPPKITKDGVTVAKSIDFEDKFEDMGAQLIKSVASKTNDIAGDGTTTATVLARAIYSEGCKAVAAGLNPLDLRRGIQLAVNSVVKTLGEISRPISSKAEVSQVGTISANADREIGDLIADAMERVGKEGVITVQDGKTLENVLDVVEGMKFERGFISPYFITDAKTQTCELENPMILLVEKKVSNLQQLVPLLESVIKSQSSLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAILTGGTVISEEMGMKLEETQPHHLGRCKKVTVTKNETVVLDGAGEQASIQERCELIRNGIDTTKSDYEREKLQERLAKLSGGVAVIQVGGASEVEVQEKKDRVVDALNATRAAVEEGIVPGGG 440
[Close]
BLAST of NO14G01730 vs. NCBI_GenBank
Match: XP_002901426.1 (chaperonin CPN60-1, mitochondrial precursor [Phytophthora infestans T30-4] >EEY58953.1 chaperonin CPN60-1, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 613.2 bits (1580), Expect = 6.400e-172
Identity = 318/419 (75.89%), Postives = 366/419 (87.35%), Query Frame = 0 
Query:   19 RGMAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            R  + GKD+RFGVEGRA ML G D+LA+AVQVTLGPKGRN +IDQ +GAPKITKDGVTVA+SI+F+++F NMGA LVR VAS TND AGDGTT+ATVLTRAIFSEGCK+VAAG+NP DLRRG Q+AVDHVV  L  +S  V  K +V+QV TISAN E  IG+L++DAMERVGKEGVITVQDGKTL+NELEVVEGMKFDRG+ISPYF+TDNKTQ+ E+ENPYILLVEKK++S+Q++IP+LE VVK QRPLLIIAEDVESEALA LV+NK+R G+KV AVKAPGFGDNRKA+LQD+AVLTG  VISEDLG ++E  T +MLG +KKVTV+KDDTL+L G G+ EA++ER  LL+ SI  T SDYEKEKLQERLAKLSGGVAVIKVGG SEVEV EKKDRVVDALNATRAAV +GIVPGGG
Sbjct:   21 RLFSSGKDIRFGVEGRAAMLKGADQLANAVQVTLGPKGRNVVIDQSYGAPKITKDGVTVARSIDFQDKFENMGAQLVRSVASSTNDAAGDGTTSATVLTRAIFSEGCKSVAAGMNPTDLRRGIQMAVDHVVDGLQKLSMDVADKEKVAQVATISANSETEIGNLISDAMERVGKEGVITVQDGKTLYNELEVVEGMKFDRGFISPYFVTDNKTQSCEMENPYILLVEKKVSSLQAIIPMLETVVKQQRPLLIIAEDVESEALAALVINKIRGGVKVCAVKAPGFGDNRKASLQDMAVLTGATVISEDLGHRLETATPEMLGGAKKVTVTKDDTLMLDGAGSAEAVEERGNLLRASIEGTTSDYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEKKDRVVDALNATRAAVAEGIVPGGG 439
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BLAST of NO14G01730 vs. NCBI_GenBank
Match: XP_002295556.1 (mitochondrial chaperonin [Thalassiosira pseudonana CCMP1335] >ACI64273.1 mitochondrial chaperonin [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 611.3 bits (1575), Expect = 2.400e-171
Identity = 317/417 (76.02%), Postives = 364/417 (87.29%), Query Frame = 0 
Query:   21 MAGGKDVRFGVEGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVKVLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIASIQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDDTLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGG 438
            MA GK++RFGVEGRA ML GVD LADAVQVTLGPKGRNAII QP+G PKITKDGVTVAKSI+F + F +MGA LV+ VASKTNDIAGDGTTTATVL RAI+ EGCKAVAAG+NP+D+RRG Q AV  VV  L  ISR +TS+ EVSQVGTISAN +  IG L++DAMERVGKEGVITVQDGKT+ +ELEVVEGMKFDRG+ISPYFI+D KTQ  ELENP ILLVEKK++SIQ LIP+LE ++K Q+ LLI+AEDVESEALATLVVNKLRAGIKV AVKAPGFGDNRKAT+QD+A+LTGG VISE++G+K+E+VT + LGT K+V V+K+DT++L G G + AI+ERC L++  I  T SDYE+EKLQERLAKLSGGVAVIKVGG SEVEVNEKKDRVVDALNATRAAVE+GIVPGGG
Sbjct:    1 MASGKEIRFGVEGRAAMLRGVDLLADAVQVTLGPKGRNAIIAQPYGPPKITKDGVTVAKSIDFADNFEDMGAQLVKSVASKTNDIAGDGTTTATVLARAIYREGCKAVAAGMNPLDVRRGIQQAVGVVVDTLESISRPITSREEVSQVGTISANNDAEIGRLISDAMERVGKEGVITVQDGKTIEDELEVVEGMKFDRGFISPYFISDPKTQTCELENPMILLVEKKVSSIQQLIPVLESIIKGQQSLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAILTGGTVISEEVGMKIEDVTPEQLGTCKRVRVTKNDTIVLDGAGEKPAIEERCELIRSGIETTKSDYEREKLQERLAKLSGGVAVIKVGGASEVEVNEKKDRVVDALNATRAAVEEGIVPGGG 417
The following BLAST results are available for this feature:
BLAST of NO14G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OWZ14546.16.800e-17476.13Chaperonin GroL [Phytophthora megakarya][more]
CCI46088.18.900e-17472.94unnamed protein product [Albugo candida][more]
CCA20827.12.600e-17372.48mitochondriatargeted chaperonin putative [Albugo l... [more]
XP_008894090.11.300e-17275.66chaperonin GroL [Phytophthora parasitica INRA-310]... [more]
KUF85566.11.300e-17275.66Chaperonin CPN60-1 [Phytophthora nicotianae] >KUF9... [more]
XP_024574876.11.700e-17275.89chaperonin [Plasmopara halstedii] >CEG38507.1 chap... [more]
POM73512.12.900e-17276.09Chaperonin GroL [Phytophthora palmivora var. palmi... [more]
XP_002176830.16.400e-17273.30mitochondria-targeted chaperonin [Phaeodactylum tr... [more]
XP_002901426.16.400e-17275.89chaperonin CPN60-1, mitochondrial precursor [Phyto... [more]
XP_002295556.12.400e-17176.02mitochondrial chaperonin [Thalassiosira pseudonana... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL140nonsL140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR025ngnoR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002414NSK002414Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01730.1NO14G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|36428gene_5743Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100171g8gene5874Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01730.1NO14G01730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01730 ID=NO14G01730|Name=NO14G01730|organism=Nannochloropsis oceanica|type=gene|length=2737bp
TTGTGTGTGGCACGGTTGCATGATGCAGGATACTTCGCTCCGCACAGAAT
GCCTTTGTTCCTGTTCGTACATGCCTGGCCCTCCCTTGGCATCTATTGCT
CGAGAGGAGCCCCATACTGACGCCAAACACTGCCGATAGACTTATTCTGT
CGCCCTGCTTTCTCCCCTCCAGTCCTTCCTACCACAGAACAACTTCATCA
TCATGCTCCGACAAATCTTGCGCAGGGCCCCAACCCGGGCGCTCACGGTG
CAAATGCGTGGCATGGCAGgtaaactattgggtggcgaataggatttggt
gggcttgctatagacagcgcatggagcagagtgtggcggaaccagccgga
gatgcaggaaggtgccgtgtgcggcacgcggcaggccaggcaaggggcag
agttcgcacacgctccttattttgatgagatgaagccttatttccgagtc
gtaaaactaagaaagtaaaagtagtttgtttttgtgtattgtgttcttct
gtatctcagatcatcctacgcctcccccattgtctcctcacacaacatcc
ctcatcccctccctttcctctcacacctgaaaagGCGGCAAGGACGTCCG
CTTCGGCGTGGAAGGCCGCGCACAGATGCTCATGGGCGTCGACAAGCTAG
CCGACGCCGTGCAAGTCACTTTGGGTCCAAAGGGTCGCAACGCCATTATT
GACCAGCCTTTTGGAGCCCCCAAGATTACGAAGGACGGAGTCACCGTTGC
AAAGAGCATTGAGTTCAAGGAGCGCTTCGTCAACATGGGTGCGGCGCTTG
TACGGCAGGTGGCGAGCAAGACCAATGACATTGCTGGGGATGGAACGACG
ACAGCCACGGTCCTTACCCGGGCGATTTTCTCCGAGGGCTGCAAAGCTGT
GGCTGCTGGGCTGAACCCAATGGACCTGCGAAGGGGGACGCAGTTGGCGG
TGGATCACGTGGTGAAGGTGTTAAATGATATTTCGCGCGCTGTGACTAGT
AAGGCGGAGGTGTCTCAGGTGGGGACAATCTCGGCCAACGGAGAGAAGGC
CATTGGAGATTTGCTGGCGGATGCGATGGAGAGGGTGGGGAAGGAGGGCG
TGATCACCGTGCAGGACGGCAAGACCCTGCACAACGAGTTGGAGGTGGTG
GAAGGGATGAAATTCGATCGTGGGTACATCTCTCCTTATTTCATCACAGA
CAACAAGACTCAGGCGGCCGAGCTTGAAAACCCTTACATCCTGTTAGTCG
AGAAGAAAATCGCATCCATCCAATCCCTCATCCCTCTATTGGAAATGGTG
GTGAAGACCCAGCGTCCCCTTCTCATCATTGCGGAAGACGTCGAGTCCGA
AGCCTTGGCGACGCTGGTCGTAAACAAACTGAGGGCAGGAATCAAAGTGG
CTGCTGTGAAGGCTCCCGGTTTTGGGGATAACAGGAAGGCGACTTTGCAA
GATATTGCCGTCTTGACGGGCGGGCAGGTGATCAGTGAGGACTTGGGGTT
GAAAGTCGAGAATGTGACGGAGGACATGTTGGGGACGTCCAAAAAGGTGA
CGGTCTCGAAAGATGACACCTTAATTTTACATGGCAATGGCGCGCGGGAG
GCGATCGACGAGCGGTGCGTGTTGCTTAAGGATTCCATCGCTGCCACTGC
ATCTGACTACGAGAAGGAGAAGCTGCAGGAACGCCTAGCCAAACTCTCGG
GGGGGGTGGCGGTGATCAAGGTTGGTGGTGGAAGCGAGGTTGAGGTGAAC
GAGAAGAAGGACAGAGTGGTGGATGCCTTGAACGCGACCAGGGCGGCTGT
CGAGCAAGGAATTGTCCCGGGGGGGGGTTGGCACTGCTGTGGGCCAGCAA
GCAGTTGGAGGAGGTCAAGAGTAAACTGACCAACATGGACCAGAGAATCG
GCGTGGAGATCATCGAGAAGGCACTCAAGGCACCCGCGAGGTCGATCGCA
AACAATGCTGGGGTGGAGGGGGCGGTTGTGGTGGGGGAGTTGCTGAAGAA
GGAAAAGCCGGAGTTGGGGTACAACGCCCAGACTGACGAGTACGTCAATA
TGTTCGAGGCGGGGATCATTGACCCGACCAAGGTGGTAAGGACTGCTTTG
GTAGATGCCCAGTCGGTTGCTGCCTTGATGATTACGACCGAGGCAATGAT
TGCAGATTTGCCCAAGGAGGAGGGGGAGGGGGGGGGGATGCCGGGAATGG
GTGGGATGGGTGGGATGGGCGGGATGGGCGGGATGGGGTTCTAATGTGAG
AGAAAGTGAGTACCGAGTATAGAAGTTGAGGAGTATCGAATGTTTGGTAC
ATACACTATTTCATTGAAGGGGTGTAAGCCCTGTGTGTGAATGTGTGTGT
CGGGGAATGGGGGGTTAGCGACTGACGGGCGGACTCATGGGGTGTATCTG
GTACGGTGTGTGGCGGGAATGAAGAGAGAGTGTGTGAGAGCGAGAAAGAG
AAAGAGAAAGAGTAGACGTATCACGATTTTGTGTCCTCCAAGATGTGACT
GCCGGTGCTTCTTTTCATATTTTCTCTCTCCTTAGAACTTGAAAATATGT
CCTCATAGCGAGGCAGTGCATGATGGGAGGAGCAACAACCAAACATAAAA
GGAAAATTAAGGCGAAAGACAATCTACGACCTAAAAGACAGGCCCCAAAT
TTTGCGAGAGGGTGGTGTCATGGGGCAGTTGCGGACAACGTGCGGACTGT
CTTGTGCATCCAAATACAAACTCTCGTCACATCCTTT
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protein sequence of NO14G01730.1

>NO14G01730.1-protein ID=NO14G01730.1-protein|Name=NO14G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MLRQILRRAPTRALTVQMRGMAGGKDVRFGVEGRAQMLMGVDKLADAVQV
TLGPKGRNAIIDQPFGAPKITKDGVTVAKSIEFKERFVNMGAALVRQVAS
KTNDIAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVK
VLNDISRAVTSKAEVSQVGTISANGEKAIGDLLADAMERVGKEGVITVQD
GKTLHNELEVVEGMKFDRGYISPYFITDNKTQAAELENPYILLVEKKIAS
IQSLIPLLEMVVKTQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAP
GFGDNRKATLQDIAVLTGGQVISEDLGLKVENVTEDMLGTSKKVTVSKDD
TLILHGNGAREAIDERCVLLKDSIAATASDYEKEKLQERLAKLSGGVAVI
KVGGGSEVEVNEKKDRVVDALNATRAAVEQGIVPGGGWHCCGPASSWRRS
RVN*
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Synonyms
Publications