NO14G01650, NO14G01650 (gene) Nannochloropsis oceanica

Overview
NameNO14G01650
Unique NameNO14G01650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length699
Alignment locationchr14:514885..515583 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistidine triad nucleotide binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:514885..515583 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: EWM24661.1 (histidine triad nucleotide binding protein [Nannochloropsis gaditana])

HSP 1 Score: 199.9 bits (507), Expect = 5.500e-48
Identity = 87/150 (58.00%), Postives = 117/150 (78.00%), Query Frame = 0 
Query:    1 MGGLLSKGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGKSPQDTRFCFHVEPFNSIL---------PFLSPLSSWKYKVGTQWCWSYDSV 142
            MG LL+KG+ YEAD +T+++CLFCDIAADK G R+T +A+ED++VVVFAPLE CA EHWLVVPRAH R+A+TL   DLP+L +M+++G Q+L+ KQP  +    +FCFH+EPFNSI          PF++P+S++KYK GT WCWS+D+V
Sbjct:   11 MGNLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAV 160
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: CEM40143.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 96.7 bits (239), Expect = 6.600e-17
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 0 
Query:    5 LSKGIEYEADGMTVRQCLFCDIAA--DKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQI-------LEQKQPGKSPQDT----------RFCFHVEPFNS---------ILPFLSPLSSWKYKVGTQWCWSYDSVRLRLE 147
            L K + Y   G  V +C+FC IA+  + P   + +V +ED+ V+ FAP EP +  H LV P+ H R+  TL ++ +PLL HM+ +G Q+          ++ G    D+          +F FH  P++S         + PF+SP+   KY+  T WC SYD++R   E
Sbjct:   54 LYKSVTYGEYG-EVLKCVFCRIASGEELPANGKGSVLYEDESVISFAPREPASLVHILVCPKKHIRNCRTLDSSHVPLLDHMRRVGQQVAADEFAKTRTRKKGSRSHDSMAGTPFDDRLQFSFHAPPWHSVDHLHLHCFVKPFISPVLWVKYRQDTSWCVSYDAIRSEAE 222
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: CBJ32129.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 95.1 bits (235), Expect = 1.900e-16
Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 0 
Query:    4 LLSKGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGKSPQDTRFCFHVEPFNSI---------LPFLSPLSSWKYKVGTQWCWSYDSVR 143
            ++SKG+ + A G  ++ CLFCD A      ++  + +EDD V+ F+PL+P A +H LVVP+ H  +   L   D PLL  MK +  ++L+          T+  FH+ P+NS+          PFLS  +  ++  G  WC S++ VR
Sbjct:   34 IVSKGVVWNARG-EMQSCLFCDFANH---TKEKELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK-----CDASQTQLSFHIPPWNSVDHLHLHALETPFLSWWNGLRFSEGKPWCASFEGVR 172
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: OWZ14425.1 (hypothetical protein PHMEG_00012105 [Phytophthora megakarya])

HSP 1 Score: 92.8 bits (229), Expect = 9.500e-16
Identity = 56/156 (35.90%), Postives = 74/156 (47.44%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQIL--EQKQPGKSPQ--DTRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I      +      +ED+ VVVF PL P    H L+VPRAH R+ + L A    LL  M  +   ++  E ++    P+  D R+ FHV PFNSI              L      KY+  + WC SYD V  RL +
Sbjct:   31 KGVRYHRDGQ-VRSCRFCEILR----MGTEPFLYEDEHVVVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRELLARMHRVAEAVMTAENRECELQPEAPDVRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRIKYRTESWWCRSYDQVMARLTD 181
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: POM57516.1 (HIT-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 92.4 bits (228), Expect = 1.200e-15
Identity = 60/159 (37.74%), Postives = 75/159 (47.17%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAF--EDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQIL----EQKQPGKSPQD-TRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I      LR  A  F  ED+ VVVF PL P    H L+VPRAH R+ + L A    LL  M  +   ++    E  + G   ++  R+ FHV PFNSI              L      KY+  + WC SYD V  RL E
Sbjct:   44 KGVRYHRDGQ-VRSCRFCEI------LRTGAEPFLYEDEHVVVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRELLARMHRVAEAVMTTGPEDPEEGHGDENRIRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRLKYRTESWWCRSYDQVMARLTE 195
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: POM77380.1 (HIT-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 92.0 bits (227), Expect = 1.600e-15
Identity = 61/159 (38.36%), Postives = 75/159 (47.17%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAF--EDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILE--QKQPGKSPQD---TRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I      LR  A  F  ED+ VVVF PL P    H L+VPRAH R+ + L A    LL  M  +   ++    + P +S  D    R+ FHV PFNSI              L      KY+  + WC SYD V  RL E
Sbjct:   44 KGVRYHRDGQ-VRSCRFCEI------LRTGAEPFLYEDEHVVVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRELLARMHRVAEAVMTTGPENPEESHGDENRIRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRLKYRTESWWCRSYDQVMARLTE 195
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: ETI34227.1 (hypothetical protein F443_19196 [Phytophthora parasitica P1569] >ETK74589.1 hypothetical protein L915_18619 [Phytophthora parasitica] >ETO62982.1 hypothetical protein F444_19148 [Phytophthora parasitica P1976] >ETP04122.1 hypothetical protein F441_19009 [Phytophthora parasitica CJ01A1] >KUF98335.1 hypothetical protein AM588_10010962 [Phytophthora nicotianae])

HSP 1 Score: 91.3 bits (225), Expect = 2.800e-15
Identity = 56/165 (33.94%), Postives = 70/165 (42.42%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGK-------------SPQDTRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I       R     +ED+ V VF PL P    H L+VPRAH R+ + L A    LL HM  +   ++ Q    +                  R+ FHV PFNSI              L      KY+  + WC SYD V  RL E
Sbjct:   48 KGVRYHRDGQ-VRSCRFCEILR----TRAEPFLYEDEHVAVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRGLLAHMHRVAESVMTQGPENECVELQPEGLNVHGDENPVRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRLKYRTESWWCRSYDQVMARLTE 207
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: XP_008897067.1 (hypothetical protein PPTG_05301 [Phytophthora parasitica INRA-310] >ETL28011.1 hypothetical protein L916_18523 [Phytophthora parasitica] >ETM34473.1 hypothetical protein L914_18436 [Phytophthora parasitica] >ETN17516.1 hypothetical protein PPTG_05301 [Phytophthora parasitica INRA-310] >ETP32200.1 hypothetical protein F442_18974 [Phytophthora parasitica P10297] >KUF67056.1 Histidine triad nucleotide-binding protein 3 [Phytophthora nicotianae] >KUG02095.1 Histidine triad nucleotide-binding protein 3 [Phytophthora nicotianae])

HSP 1 Score: 91.3 bits (225), Expect = 2.800e-15
Identity = 56/165 (33.94%), Postives = 70/165 (42.42%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGK-------------SPQDTRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I       R     +ED+ V VF PL P    H L+VPRAH R+ + L A    LL HM  +   ++ Q    +                  R+ FHV PFNSI              L      KY+  + WC SYD V  RL E
Sbjct:   48 KGVRYHRDGQ-VRSCRFCEILR----TRAEPFLYEDEHVAVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRGLLAHMHRVAESVMTQGPENECVELQPEGLNVHGDENPVRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRLKYRTESWWCRSYDQVMARLTE 207
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: ETL81266.1 (hypothetical protein L917_18345 [Phytophthora parasitica])

HSP 1 Score: 91.3 bits (225), Expect = 2.800e-15
Identity = 56/165 (33.94%), Postives = 70/165 (42.42%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGK-------------SPQDTRFCFHVEPFNSI-----------LPFLSPLSSWKYKVGTQWCWSYDSVRLRLEE 148
            KG+ Y  DG  VR C FC+I       R     +ED+ V VF PL P    H L+VPRAH R+ + L A    LL HM  +   ++ Q    +                  R+ FHV PFNSI              L      KY+  + WC SYD V  RL E
Sbjct:   48 KGVRYHRDGQ-VRSCRFCEILR----TRAEPFLYEDEHVAVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRGLLAHMHRVAESVMTQGPENECVELQPEGLDVHGDENPVRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRLKYRTESWWCRSYDQVMARLTE 207
[Close]
BLAST of NO14G01650 vs. NCBI_GenBank
Match: OWZ21133.1 (hypothetical protein PHMEG_0004347 [Phytophthora megakarya])

HSP 1 Score: 88.6 bits (218), Expect = 1.800e-14
Identity = 60/175 (34.29%), Postives = 80/175 (45.71%), Query Frame = 0 
Query:    7 KGIEYEADGMTVRQCLFCDI--AADKPGLRQTAVAFEDDKVVVFAPLEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILE-------QKQPGKSPQ----------------DTRFCFHVEPFNSILPF-----------LSPLSSWKYKVGTQWCWSYDSVRLRL 146
            KG+ Y  DG  +R C FC+I  + D+P L      +ED+ VVVF PL P    H LVVPR H R+ + LT +D  LL HM+ + + +L           P K+ +                D +F FH  PFNSI                 + S KY+  T WC S+D V  RL
Sbjct:  120 KGVTYGHDGALMR-CRFCEILESGDEPFL------YEDEDVVVFRPLAPVVVSHILVVPRRHIRNVNKLTPSDAELLRHMREVAAMVLRDLPRPTVMLAPSKAERAHNITEDLTDEEDLESDFKFAFHSPPFNSIDHVHMHAFRTRDGRFGCVGSIKYRTETWWCRSFDEVMTRL 287
The following BLAST results are available for this feature:
BLAST of NO14G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24661.15.500e-4858.00histidine triad nucleotide binding protein [Nannoc... [more]
CEM40143.16.600e-1732.94unnamed protein product [Vitrella brassicaformis C... [more]
CBJ32129.11.900e-1633.78expressed unknown protein [Ectocarpus siliculosus][more]
OWZ14425.19.500e-1635.90hypothetical protein PHMEG_00012105 [Phytophthora ... [more]
POM57516.11.200e-1537.74HIT-like protein [Phytophthora palmivora var. palm... [more]
POM77380.11.600e-1538.36HIT-like protein [Phytophthora palmivora var. palm... [more]
ETI34227.12.800e-1533.94hypothetical protein F443_19196 [Phytophthora para... [more]
XP_008897067.12.800e-1533.94hypothetical protein PPTG_05301 [Phytophthora para... [more]
ETL81266.12.800e-1533.94hypothetical protein L917_18345 [Phytophthora para... [more]
OWZ21133.11.800e-1434.29hypothetical protein PHMEG_0004347 [Phytophthora m... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002364NSK002364Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01650.1NO14G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100055g15gene5834Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01650.1NO14G01650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01650 ID=NO14G01650|Name=NO14G01650|organism=Nannochloropsis oceanica|type=gene|length=699bp
ATGGGCGGGCTGCTAAGCAAAGGGATTGAGTACGAAGCTGATGGCATGAC
GGTGAGACAATGTCTTTTCTGTGACATTGCGGCTGACAAACCAGGCCTTA
GACAGACAGCTGTGGCTTTTGAGGACGACAAGgtgcgatttgtgtgtgtg
gacgacaacgatcatgagccatcctctatttcacctccatctcccatcct
tcatcctttcatctttcatcctcatcctcatccttcacctcctagtatag
GTGGTGGTCTTTGCCCCCCTGGAGCCATGCGCCTCAGAGCACTGGCTGGT
CGTACCTCGGGCTCACCATCGTAGTGCTAGCACCTTGACGGCTAATGACT
TACCTCTCCTGGTGCACATGAAAAACATTGGCTCCCAAATACTCGAACAA
AAACAACCCGGGAAGAGCCCTCAAGACACCCGCTTCTGCTTCCATGTCGA
GCCGTTTAATTCAAgtaagttttcctgtctactcttgcattatcatcatt
cgagaatgagggggactcctcacatgattcgtcgccagcatctcacacac
tgctttttctatttcttgtagttgctcacttacacttacactgccaagTC
TTGCCTTTCTTATCGCCCCTGTCATCGTGGAAGTACAAGGTCGGCACACA
GTGGTGCTGGAGCTATGACTCTGTGAGATTGCGTCTGGAAGAGGAATAA
back to top

protein sequence of NO14G01650.1

>NO14G01650.1-protein ID=NO14G01650.1-protein|Name=NO14G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=149bp
MGGLLSKGIEYEADGMTVRQCLFCDIAADKPGLRQTAVAFEDDKVVVFAP
LEPCASEHWLVVPRAHHRSASTLTANDLPLLVHMKNIGSQILEQKQPGKS
PQDTRFCFHVEPFNSILPFLSPLSSWKYKVGTQWCWSYDSVRLRLEEE*
back to top
Synonyms
Publications