NO14G01470, NO14G01470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01470 vs. NCBI_GenBank
Match: EWM24637.1 (Transport protein particle (TRAPP) component [Nannochloropsis gaditana]) HSP 1 Score: 272.7 bits (696), Expect = 9.400e-70 Identity = 145/172 (84.30%), Postives = 152/172 (88.37%), Query Frame = 0 Query: 29 MTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASF 201 MT+ KR SG GG R+L+ILDRPLA K EVSLSAFSFLFSEMVQYYQ+RVLSIADLERKLEEAGYGVGHR+LELLA RE+QYRRE KLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITN FVSAPADISQLNCAAYIAGIISGVLNGAS+ Sbjct: 1 MTESKRNAGSGGGGIRMLNILDRPLATK---GRGVGGSEVSLSAFSFLFSEMVQYYQNRVLSIADLERKLEEAGYGVGHRVLELLAFREKQYRREIKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNVFVSAPADISQLNCAAYIAGIISGVLNGASY 169
BLAST of NO14G01470 vs. NCBI_GenBank
Match: CBJ30667.1 (Transport protein particle component (TRAPP)/ SPP30-like [Ectocarpus siliculosus]) HSP 1 Score: 205.7 bits (522), Expect = 1.400e-49 Identity = 113/161 (70.19%), Postives = 129/161 (80.12%), Query Frame = 0 Query: 48 ILDRPL-AAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASF---VSLH 205 ILDR + AA KG EVSLSAFSFLFSEMVQY+Q RV SIADLERKLEEAGYG+G R+LEL RER +R +L+ +LQ+VSS VWKALF K ADSLERSTENEDEYMIHEREP+TN+FVS PAD+ QLNCAA +AG+I+GVL+GASF VS H Sbjct: 14 ILDRQIVAAGKGG----KPAEVSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASFPARVSAH 170
BLAST of NO14G01470 vs. NCBI_GenBank
Match: GAY06014.1 (trafficking protein particle complex subunit, putative [Pythium insidiosum] >GAY04826.1 trafficking protein particle complex subunit, putative [Pythium insidiosum]) HSP 1 Score: 197.2 bits (500), Expect = 5.000e-47 Identity = 101/163 (61.96%), Postives = 124/163 (76.07%), Query Frame = 0 Query: 38 SGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASF 201 SG+G L ILDRPL+ KG EVSLSAF+FLFSEMVQY+Q RV +I DLE +L++AG+GVG R+LELL RE+ RRET+LI +LQF+ ST W+ALF K AD+LERSTENEDEYMIHE EP+TN F+S P D+ QL+CAA+IAG+I G+L F Sbjct: 7 SGLGATTKLHILDRPLSRGKG--------EVSLSAFAFLFSEMVQYFQGRVQNITDLETRLDDAGFGVGVRVLELLCFREKSGRRETRLINMLQFIVSTCWRALFGKAADALERSTENEDEYMIHELEPLTNKFISVPQDLGQLDCAAFIAGMIRGILTSGGF 161
BLAST of NO14G01470 vs. NCBI_GenBank
Match: POM67225.1 (Trafficking protein particle complex subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 194.9 bits (494), Expect = 2.500e-46 Identity = 106/176 (60.23%), Postives = 130/176 (73.86%), Query Frame = 0 Query: 27 LQMTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 + M G+R S+GV L +LDRPL+ K EVSLS FSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQFV ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGII G+L + FV+ Sbjct: 1 MMMEGGRR--STGVSASN-LHVLDRPLSRGKS--------EVSLSVFSFLFSEMVQYFQGRVQNISDLENRLDNAGFGVGVRVVELLCHREKSGRRETRLLAMLQFVVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIIRGILCSSGFVA 165
BLAST of NO14G01470 vs. NCBI_GenBank
Match: XP_009531695.1 (hypothetical protein PHYSODRAFT_303479 [Phytophthora sojae] >EGZ14266.1 hypothetical protein PHYSODRAFT_303479 [Phytophthora sojae]) HSP 1 Score: 194.1 bits (492), Expect = 4.300e-46 Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 0 Query: 29 MTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 M G+R T L +LDRPL+ KG EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQF+ ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGI+ G+L + F++ Sbjct: 2 MEAGRRSTGMSATN---LHVLDRPLSRGKG--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLAMLQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFLA 164
BLAST of NO14G01470 vs. NCBI_GenBank
Match: XP_024584001.1 (trafficking protein particle complex subunit 5-like [Plasmopara halstedii] >CEG47632.1 trafficking protein particle complex subunit 5-like [Plasmopara halstedii]) HSP 1 Score: 193.7 bits (491), Expect = 5.600e-46 Identity = 105/174 (60.34%), Postives = 130/174 (74.71%), Query Frame = 0 Query: 29 MTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 M G+R S+GV L +LDRPL+ K EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQF+ ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGI+ G+L + FV+ Sbjct: 1 METGRR--STGVSATN-LHVLDRPLSRGKS--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRIVELLCHREKSGRRETRLLSMLQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFVA 163
BLAST of NO14G01470 vs. NCBI_GenBank
Match: XP_008898933.1 (hypothetical protein PPTG_06641 [Phytophthora parasitica INRA-310] >ETK95678.1 hypothetical protein L915_01416 [Phytophthora parasitica] >ETM55360.1 hypothetical protein L914_01402 [Phytophthora parasitica] >ETN15366.1 hypothetical protein PPTG_06641 [Phytophthora parasitica INRA-310] >ETO84616.1 hypothetical protein F444_01490 [Phytophthora parasitica P1976]) HSP 1 Score: 193.4 bits (490), Expect = 7.300e-46 Identity = 104/176 (59.09%), Postives = 131/176 (74.43%), Query Frame = 0 Query: 27 LQMTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 + M G+R S+GV L +LDRPL+ K EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQF+ ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGI+ G+L + F++ Sbjct: 12 IMMDAGRR--STGVSATN-LHVLDRPLSRGKS--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLNMLQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFLA 176
BLAST of NO14G01470 vs. NCBI_GenBank
Match: ETL49062.1 (hypothetical protein L916_01391 [Phytophthora parasitica]) HSP 1 Score: 193.4 bits (490), Expect = 7.300e-46 Identity = 104/176 (59.09%), Postives = 131/176 (74.43%), Query Frame = 0 Query: 27 LQMTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 + M G+R S+GV L +LDRPL+ K EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQF+ ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGI+ G+L + F++ Sbjct: 8 IMMDAGRR--STGVSATN-LHVLDRPLSRGKS--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLNMLQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFLA 172
BLAST of NO14G01470 vs. NCBI_GenBank
Match: XP_002899011.1 (trafficking protein particle complex subunit, putative [Phytophthora infestans T30-4] >EEY62375.1 trafficking protein particle complex subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 193.4 bits (490), Expect = 7.300e-46 Identity = 105/174 (60.34%), Postives = 130/174 (74.71%), Query Frame = 0 Query: 29 MTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 M G+R S+GV L +LDRPL+ K EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQF+ ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGII G+L + F++ Sbjct: 2 MESGRR--STGVAATN-LHVLDRPLSRGKS--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLNMLQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIIRGILCSSGFLA 164
BLAST of NO14G01470 vs. NCBI_GenBank
Match: OWY91009.1 (Trafficking protein particle complex subunit, partial [Phytophthora megakarya]) HSP 1 Score: 193.4 bits (490), Expect = 7.300e-46 Identity = 105/174 (60.34%), Postives = 129/174 (74.14%), Query Frame = 0 Query: 29 MTDGKRGTSSGVGGPRVLSILDRPLAAKKGSXXXXXXXEVSLSAFSFLFSEMVQYYQSRVLSIADLERKLEEAGYGVGHRMLELLALRERQYRRETKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNAFVSAPADISQLNCAAYIAGIISGVLNGASFVS 203 M G+R S+GV L +LDRPL+ K EVSLSAFSFLFSEMVQY+Q RV +I+DLE +L+ AG+GVG R++ELL RE+ RRET+L+ +LQFV ST WKALF K AD+LERSTENEDEYMIHE EP+TN FVS P D+ QL+CAAYIAGI+ G+L + F + Sbjct: 2 MEGGRR--STGVSASN-LHVLDRPLSRGKS--------EVSLSAFSFLFSEMVQYFQGRVQNISDLENRLDNAGFGVGVRVVELLCHREKSGRRETRLLAMLQFVVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGFTA 164 The following BLAST results are available for this feature:
BLAST of NO14G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01470 ID=NO14G01470|Name=NO14G01470|organism=Nannochloropsis oceanica|type=gene|length=1282bpback to top protein sequence of NO14G01470.3 >NO14G01470.3-protein ID=NO14G01470.3-protein|Name=NO14G01470.3|organism=Nannochloropsis oceanica|type=polypeptide|length=209bpback to top protein sequence of NO14G01470.2 >NO14G01470.2-protein ID=NO14G01470.2-protein|Name=NO14G01470.2|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top protein sequence of NO14G01470.1 >NO14G01470.1-protein ID=NO14G01470.1-protein|Name=NO14G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top Synonyms
Publications
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