NO14G01420, NO14G01420 (gene) Nannochloropsis oceanica

Overview
NameNO14G01420
Unique NameNO14G01420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4212
Alignment locationchr14:451148..455359 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:451148..455359 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
Vocabulary: INTERPRO
TermDefinition
IPR027640Kinesin-like_fam
Homology
BLAST of NO14G01420 vs. NCBI_GenBank
Match: XP_005852361.1 (hypothetical protein NGA_0701100, partial [Nannochloropsis gaditana CCMP526] >EKU23466.1 hypothetical protein NGA_0701100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 337.4 bits (864), Expect = 1.600e-88
Identity = 191/351 (54.42%), Postives = 234/351 (66.67%), Query Frame = 0
Query:  695 FEDEPLEANEVVLTPEGAEGVIEGIRRGNVVVKTDAGLETFKLEEVKRKHIAPPGYVKPVPKTRAGGRGRGEG-GAAAIVNKDLLDSWEALEERMVKVEKDAERGMRDKLEILYQESGLEQHLHRGAGNVEPEEMDAHPFSAGXXXXXXXXXXXXXXXRAKRRGEGCASVRPILFMSAPRGVVPFEVPLLVSPVVDLPDHTLAICHVTFDARKEGGREGGEALTVAERVASARARTFSKGFQAWEEEKREHSTLKAEVVKLETIVRRQKQQTDEITRWLNVDSSGPTATKLKNQLACLEGDMHNLRFRHRIECQIANIPVPEGEEFLLPSGVLKSVDLPAMLHEAAELGAG 1045
            F+DEPLEA+EVV+TPEGAEGV+EGIRRGNVVVK++ GLETFKLEEV+RK +APPGYVKP        RGRGEG   AAIV++DLL +WEALEERM + E+ A R  R+ LE LYQ SGL+Q L R       EE DA P   G               R KRR E  A +R  LF +APRG VP E+PLL+SPVVDLPDH LA+C +       G  +  E  +VAERV   R R FS+G ++WEE +              T  RRQ+ QT+EI+RW+  D++G    KL+ QLA +EGDMH LR RHR+EC+IANI +PEGE+ LLP+G LK++DLPAML+EA EL  G
Sbjct:    9 FKDEPLEASEVVVTPEGAEGVVEGIRRGNVVVKSETGLETFKLEEVRRKRVAPPGYVKP-------ARGRGEGRRGAAIVDRDLLRAWEALEERMGEAERAAARETRETLEALYQASGLDQLLRRDG----REEEDAEPSLYG------GVLGLGGSHRQKRRAEANAPIRSFLFTTAPRGAVPPEIPLLLSPVVDLPDHALALCFL------GGAPKTVEGPSVAERVRDLRERVFSEGLRSWEERRLXXXXXXXXXXXXXTRARRQRLQTEEISRWVAQDAAGSVLGKLRGQLASVEGDMHQLRLRHRVECKIANIALPEGEDLLLPAGALKALDLPAMLNEAGELAVG 336          
The following BLAST results are available for this feature:
BLAST of NO14G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005852361.11.600e-8854.42hypothetical protein NGA_0701100, partial [Nannoch... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002341NSK002341Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01420.1NO14G01420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01420.1NO14G01420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01420 ID=NO14G01420|Name=NO14G01420|organism=Nannochloropsis oceanica|type=gene|length=4212bp
CAAGCCACCCCCTCTTCGGGCTCCCTCCTCGTGCTCGGTCTTCTCGACGT
TGATTTTGGCGGCCTGTTTTAGCGGAGTGCGCCTCAAAAAAAACGACGAG
ATGTGTGGTGCGTTTGACTGCCCTTCTTGAGCTTTCCAACCGCATGCCTG
GCCCCTTCCGCGGGCCAATTTTCTCTGTCCAGTCGTGTAGGCAGTGTCTA
GGCCAGGAGTTTTTAAAAGCACGTTGCTGCGCTTTCATCTTGGCACTGTT
TTGCCCGCATGACCGCTTCACTTTTCCAGACAACGGGTCCAAACTGCGGA
GGACACCCGACGGACGCCGGGCCAATAAAAGCGCCCGTGTGACCGTCATG
GGAGATGAAAGGCACACGCATGCCATGGCTATAGTATCGCTAGCGGCTTT
GCATTTTTGGTTTTTTGTTTGACTTTCTGTTAGCCACCCGCGGCGTCGAG
GCCTCAAGCACGTGAGCAGAAGAGAAGAATCCATGCATACACGACCCGCG
GAGCAAACATACTAGGTCACAGTACACCAGCTTAAGGGCCCGTCCACCCA
CCGCGACAGGAAACACTTCCGGACAACATTGTCTGGACCACACACCTACT
CATACATTCGTTTCTGGCTCCCACGCTTCCAACCCGGACACAGCAACTCC
CGGCGGCTTCCTCGCGCAAGACAGCCTGGTGGCGTGTGAGCGGCTTTCCC
TTGACACGTAGCGGCAACACCTGCTGCGTCACACCCCTCTTGTAAAGAAA
CTGCACGCCATTCCCTGAACAAGGGGGCAGATTGTTGTGGAGTGACGTGT
GAGGGTACTGGGAAATCCCTCGGCACGAGATCACCGTCTGAGCGACGGGG
TGGTGTTGGGTGTGCCCCGGGCCGGTATGCTCTGAGCAGTAACACACCAA
CCAGCAGCACATACCATGGACAACAACCAGATGCAACAGGACCAGCAGCA
GCTGGCAGGACAGCTGGAGCAGGAAGCGCCGGCCCTCTCATCTTCACAGG
AGTCTGGCATGGACTTTGGCGACAACTCTATCAACGACATGGCGCACATG
GACCCCTTGGGAGGCGCAAGTAATGGGGGCGGGGAGGGTGAGAGGGTTGG
TGATGGAGTTAGGGAGGGAGGGGGAGGGGGAGGTAAGGGTGGTCGAGGGC
GTGGGCAAGCGGTTTTCTTGGACTTGCCTTCAGCGCCGTTCAGTGCCCCG
TCTTTGGAGCCGCCAGGGGGCGTGCCCCTGACCATCGGTGGGGGTAGTGG
CATCACGCTCGAGGCGCCAGCAGTACAGAATGGGAGTGGGGCGGTTCTAT
TGCCGACACTGGACGAAGGCGCTGCCGGCAGCAATGTCAACGGGAACGAG
GTGTGGGAGCCCATCCCCATCCAAGCCCCGGGCTTTGTGCCTGAAAGCAG
CAGCAGCGGCAGCAGCGGCAGCACTGGAGGTAGCCTACCCGTTGACTCTA
TTGGGACGATCTCCATCAGTATTTCCGGTGGTGGTGGTGCAACTTCCTCT
CCTCCTCCACCTCCCCCACCACCACCTCCTCCTACCGCGATGACCTTTGG
GGAAGAACCGAGTTCGCACCACACCCCGCTTATCGCCAAGTCCTCTACTG
AGATGGAAAGGGACACGATTCAGACATATGATCTGCAGCAGGAGGAGCAG
CGACACGAACAGAAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCAGCAGCAGCAGCAAGAGC
AGTACTACCCACCCACGTCCCATTCGTCGCCCCTTCCTCCGACTCCACCA
CAACCACAGCAGCAGCCGCCCCAGCACGCCCAAGTCGAGACCGCCACAAT
CCATTCCCAACCCCACCAACAGCAGCTCTCCCCATCTATCCCTTCGAAAA
GTCCTCAAGAAACCAATCCTACTACTACCACTGCTACTGCTGCTACTGCT
GCTACTGCTGCTGTTTCTTCCTCACCATCCATGGCAGCAGTACCCCCCCC
CCTTCAAGGCCCCACCCGCCTTTTGAACGAGGAGGAGGAGGCGGAATGGG
AAGAGGCTCGAAAGAGCAGCAGCAACGACAGCAGCCTCCCTCCCTCCAAA
AAGCATCTGCGGAAGCAAAAAAGGTTCCTGGCGCAAGTTCGGCGGTTTAA
AGGCGTTCGCTCTTTGCCCTCGGGACTGATGGGGGTACAGACTTTGAGCC
AAGAGGAGTTTACCCTCGATCGTCAGGAGATGGCGAAGGTGGCAACTAGG
AAACCTTTGGGATATGCATCTTCTTTGACGGCGGGGTCTTCAGAGGGGGA
GAGTTTGAGTGAGGGGGAGATGGAGGGAGGGGAGGATGGATTAATGATGG
TAGGGGGGATGGGAGGGAAGGAGGGAAGGAGGGGGAAGGATTGGAGGGAT
GGGTGTGGGGGTCAGCGACGGCGAGGAGGGAGGGGGGGCGGAGGTGGGTG
GAGGGGGAGGGGTGGGGGGTATGAGGATGACAGCGGAGAGAGTGGGGAGG
AGGAGGAAATGATAGATTCTCTGCATGTGGGAGGGGGGGAGGAGCAGGGA
GAGGACAAGGACAGTGTGATTCAGCCGCTACCGGTGGAGTTCGTCGTGGC
GGAGGCGGAGAGGCAGAATTTGGATGCGCTGTACCGATCGTTGAGGGGGA
CGATGGTCAAGGTATTGCAGGAGAGAGAGAAAGAGAGAAAGGTCAAGACG
CATGCAGTCAGGGCGGTGCAGAGCCTGTGTGAGAAGGAGGCGTGGGTGTT
GGGAGCAAGGAGGCGGAAGATCAGGGTCTTGCATGATATTGTTTTGGCGT
TCCGGAAGCGGCATGCGCTGGTGCACACCATGCAGGAGATGGCTGTGTGG
ATGAAGGAAAAAATTCAGAAGAAAAAAGGGACATTAAAAGCAGCCGGAGG
AGAAGGAGAAGCGGAGTCCGAGAAGGAGATGGAAGAGAGCGAGGAGGAGG
AGGAGGAGGAGGACTCGGAAGAGGAGGAGGAAGAGCTGGTCTTGAAGTTT
GAAGATGAACCGTTGGAAGCTAATGAAGTGGTGCTGACACCAGAAGGAGC
AGAAGGGGTGATAGAAGGCATCAGACGAGGAAACGTAGTGGTCAAAACAG
ATGCGGGCCTGGAGACTTTCAAATTGGAGGAGGTGAAACGAAAGCATATC
GCCCCACCCGGATACGTGAAACCTGTGCCAAAGACGAGGGCCGGGGGAAG
GGGAAGGGGGGAGGGAGGGGCCGCAGCGATTGTGAATAAGGACTTGTTGG
ACTCGTGGGAAGCGTTGGAGGAACGGATGGTGAAGGTGGAGAAAGACGCG
GAGAGAGGGATGCGAGATAAGCTCGAAATTCTGTACCAGGAATCGGGGTT
GGAGCAACACTTGCACAGAGGGGCAGGAAATGTGGAGCCTGAGGAGATGG
ATGCTCATCCTTTCAGTGCAGGCGGGAGTAGTAGTGCGGGCTTTGGTGGG
GGAGGAGGGAGCGGCCTCCGGGCCAAGCGACGGGGGGAGGGATGTGCATC
TGTGCGGCCAATATTATTTATGAGCGCGCCGAGAGGGGTCGTGCCTTTCG
AGGTGCCCTTGTTGGTTTCGCCAGTAGTGGACTTGCCGGACCACACCCTG
GCTATCTGTCACGTGACGTTTGATGCCCGGAAAGAAGGAGGGAGGGAGGG
AGGGGAGGCGTTGACGGTGGCGGAACGAGTGGCGAGTGCGAGGGCGAGGA
CCTTTTCGAAAGGTTTCCAGGCGTGGGAGGAGGAGAAGAGGGAGCACAGC
ACTCTGAAGGCTGAGGTGGTGAAGCTTGAGACGATTGTCCGGCGGCAGAA
GCAGCAGACAGACGAGATTACCCGGTGGTTGAATGTCGATTCATCAGGGC
CGACAGCAACAAAATTGAAGAACCAGCTGGCGTGCCTGGAGGGGGATATG
CACAATTTGAGGTTTCGACATCGGATTGAGTGTCAGATTGCCAATATTCC
CGTGCCAGAAGGAGAAGAATTTTTGTTACCTTCTGGGGTACTGAAATCTG
TTGATCTTCCTGCGATGCTCCATGAGGCTGCAGAGCTGGGGGCAGGCCTG
GAGGAGGAGGACGAGGAAGAGCAGGAGGAGCAGGAGAAGCGACGGAGACT
CGCCGAGGAGGAGGCGGAGGAAGAGGCGGAGATTCTGGCGGCGCAGAAAG
AGGAGGAGATGGAGGGGGAGGAGGGGGGGATGGAGGAGGGGGGGCTCCGC
CGGGGCATATGA
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protein sequence of NO14G01420.1

>NO14G01420.1-protein ID=NO14G01420.1-protein|Name=NO14G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1099bp
MDNNQMQQDQQQLAGQLEQEAPALSSSQESGMDFGDNSINDMAHMDPLGG
ASNGGGEGERVGDGVREGGGGGGKGGRGRGQAVFLDLPSAPFSAPSLEPP
GGVPLTIGGGSGITLEAPAVQNGSGAVLLPTLDEGAAGSNVNGNEVWEPI
PIQAPGFVPESSSSGSSGSTGGSLPVDSIGTISISISGGGGATSSPPPPP
PPPPPPTAMTFGEEPSSHHTPLIAKSSTEMERDTIQTYDLQQEEQRHEQK
LQQQQQQQQQQQQQQQQQQQQKQQQQQEQYYPPTSHSSPLPPTPPQPQQQ
PPQHAQVETATIHSQPHQQQLSPSIPSKSPQETNPTTTTATAATAATAAV
SSSPSMAAVPPPLQGPTRLLNEEEEAEWEEARKSSSNDSSLPPSKKHLRK
QKRFLAQVRRFKGVRSLPSGLMGVQTLSQEEFTLDRQEMAKVATRKPLGY
ASSLTAGSSEGESLSEGEMEGGEDGLMMVGGMGGKEGRRGKDWRDGCGGQ
RRRGGRGGGGGWRGRGGGYEDDSGESGEEEEMIDSLHVGGGEEQGEDKDS
VIQPLPVEFVVAEAERQNLDALYRSLRGTMVKVLQEREKERKVKTHAVRA
VQSLCEKEAWVLGARRRKIRVLHDIVLAFRKRHALVHTMQEMAVWMKEKI
QKKKGTLKAAGGEGEAESEKEMEESEEEEEEEDSEEEEEELVLKFEDEPL
EANEVVLTPEGAEGVIEGIRRGNVVVKTDAGLETFKLEEVKRKHIAPPGY
VKPVPKTRAGGRGRGEGGAAAIVNKDLLDSWEALEERMVKVEKDAERGMR
DKLEILYQESGLEQHLHRGAGNVEPEEMDAHPFSAGGSSSAGFGGGGGSG
LRAKRRGEGCASVRPILFMSAPRGVVPFEVPLLVSPVVDLPDHTLAICHV
TFDARKEGGREGGEALTVAERVASARARTFSKGFQAWEEEKREHSTLKAE
VVKLETIVRRQKQQTDEITRWLNVDSSGPTATKLKNQLACLEGDMHNLRF
RHRIECQIANIPVPEGEEFLLPSGVLKSVDLPAMLHEAAELGAGLEEEDE
EEQEEQEKRRRLAEEEAEEEAEILAAQKEEEMEGEEGGMEEGGLRRGI*
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Synonyms
Publications