NO14G01180, NO14G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01180 vs. NCBI_GenBank
Match: ETI50061.1 (hypothetical protein F443_06310 [Phytophthora parasitica P1569] >ETL43359.1 hypothetical protein L916_06122 [Phytophthora parasitica] >ETP19832.1 hypothetical protein F441_06317 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 131.7 bits (330), Expect = 8.200e-27 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G GA G V R+L +I P ++ +V +++ Sbjct: 267 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGATQKGIGL------VMRILFFVIFGPPAFVMAVVFSIM 498
BLAST of NO14G01180 vs. NCBI_GenBank
Match: ETK89961.1 (hypothetical protein L915_06184 [Phytophthora parasitica]) HSP 1 Score: 131.7 bits (330), Expect = 8.200e-27 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G GA G V R+L +I P ++ +V +++ Sbjct: 267 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGATQKGIGL------VMRILFFVIFGPPAFVMAVVFSIM 498
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_008891750.1 (hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETL96543.1 hypothetical protein L917_06000 [Phytophthora parasitica] >ETM49697.1 hypothetical protein L914_06120 [Phytophthora parasitica] >ETN22503.1 hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETO78763.1 hypothetical protein F444_06373 [Phytophthora parasitica P1976]) HSP 1 Score: 131.7 bits (330), Expect = 8.200e-27 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G GA G V R+L +I P ++ +V +++ Sbjct: 267 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGATQKGIGL------VMRILFFVIFGPPAFVMAVVFSIM 498
BLAST of NO14G01180 vs. NCBI_GenBank
Match: ETP47744.1 (hypothetical protein F442_06353 [Phytophthora parasitica P10297]) HSP 1 Score: 131.7 bits (330), Expect = 8.200e-27 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G GA G V R+L +I P ++ +V +++ Sbjct: 267 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGATQKGIGL------VMRILFFVIFGPPAFVMAVVFSIM 498
BLAST of NO14G01180 vs. NCBI_GenBank
Match: KUF80820.1 (hypothetical protein AM587_10016070 [Phytophthora nicotianae]) HSP 1 Score: 131.7 bits (330), Expect = 8.200e-27 Identity = 78/253 (30.83%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDF-GGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALL 538 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q D G GA G V R+L +I P ++ +V +++ Sbjct: 234 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQMADIEGQGATQKGIGL------VMRILFFVIFGPPAFVMAVVFSIM 465
BLAST of NO14G01180 vs. NCBI_GenBank
Match: OWZ20152.1 (RING-finger-containing E3 ubiquitin ligase [Phytophthora megakarya]) HSP 1 Score: 129.0 bits (323), Expect = 5.300e-26 Identity = 66/213 (30.99%), Postives = 104/213 (48.83%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHYSPTNIFGCPGSQFVDFGG 499 C H++C C+K YLE +I EG+ C C D + +V + K+ R+CP C H+ + GS + P C +C +FCF+H++AH +GR +C +Y ++M AVE+ + + + +ISK CP C+ +EK GGCN + C+ C +CW+C D P H+ N+ GC G+Q + G Sbjct: 215 CGHTFCETCVKNYLEFKIKEGQVYPKCFFEKSEDKTACKADIAVDDIRLLVSEEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDN-PECVCEACNREFCFVHSSAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKQCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQMAEIEG 412
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_003293974.1 (hypothetical protein DICPUDRAFT_42790 [Dictyostelium purpureum] >EGC29499.1 hypothetical protein DICPUDRAFT_42790, partial [Dictyostelium purpureum]) HSP 1 Score: 127.9 bits (320), Expect = 1.200e-25 Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRA-EHPCPMRGDAGCNFVFGDDHLHKIVDPAILAKHQH---RATLLAEPSLRECPS--CHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASA------STVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIFGCPGSQF 494 C HSYC CI +YL I EGR + CP C + ++ +VD K+Q ATL EP ++ CP+ C T V+GGS P LTCP C +FC++ +A V+ G + + R+ +++E A+A T K KPCP+C +PIEKD GCNH++C +C++++CWLC Y P HY+ C Q+ Sbjct: 47 CGHSYCFDCITSYLNLLIIEGRVLDLSCP---HPECKKELPESDIYVLVDQKHWTKYQKFSILATLKTEP-IKWCPTPDCDTFVRGGSAEDPVLTCPKCKNEFCWI-CGEYAHQGVKC-------GSEAMQLSDRKNKSIETATAQYKEWYETNKHNVKPCPKCTSPIEKDSGCNHMTCTNCQHQYCWLCLNPYLPGHYADAEYPDCYDRQY 246
BLAST of NO14G01180 vs. NCBI_GenBank
Match: XP_001427258.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK59860.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 122.5 bits (306), Expect = 5.000e-24 Identity = 69/207 (33.33%), Postives = 108/207 (52.17%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRA-EHPCPMRGDAGCNFVFGDDHLHKIVDPAI---LAKHQHRATLLAEPSLREC--PSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKR-ISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIFGCPGSQF 494 C H +C C+++YLE +I+ G+ E CP + GC+ F DD + +++ K + + L + ++R C C +KG S ++ C CG + C+ E RR E G +C Q A+++ T+K+ + + CP+CKAPI+K GCNH++C CR+++CWLC RYT H+ N FGCP QF Sbjct: 195 CRHEFCCECLQSYLENKINNGQVLEIECPQQ---GCDNYFNDDAIKSLINDEYYQKFEKFKRQKLLDRDDTIRWCIRTGCDKYIKGKSMFSNTIKC-ECGQEMCY---------ECRR-EDHPG---MTC----EQQEALDKYYELTLKQLVIQRCPKCKAPIQKKEGCNHMTCYQCRFQFCWLCRARYTRMHFDSDNCFGCPDKQF 380
BLAST of NO14G01180 vs. NCBI_GenBank
Match: KUF86992.1 (hypothetical protein AM588_10002774 [Phytophthora nicotianae]) HSP 1 Score: 121.3 bits (303), Expect = 1.100e-23 Identity = 62/195 (31.79%), Postives = 95/195 (48.72%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPC---PMRGDAGCNFVFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSC-HTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLC----DQRYTPFHY 481 C H++C C++ YLE +I EG+ C C D + +V I K+ R+CP C H+ + GS H P C +C +FCF+H+ AH +GR +C +Y ++M AVE+ + + + +ISKPCP C+ +EK GGCN + C+ C +CW+C D P H+ Sbjct: 160 CGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDH-PECVCEACNREFCFVHSNAH-------------QGR-TCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHF 339
BLAST of NO14G01180 vs. NCBI_GenBank
Match: EJY79585.1 (IBR domain containing protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 120.6 bits (301), Expect = 1.900e-23 Identity = 67/205 (32.68%), Postives = 97/205 (47.32%), Query Frame = 0 Query: 294 CPHSYCGRCIKTYLETRIHEGRAEHPCPMRGDAGCNFVFGDDHLHKIVDPAILAKH---QHRATLLAEPSLREC--PSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIFGCPGSQF 494 C H YC C+ YLE I G+ DA C F + + K I K+ + + P+L+ C P+C+ + G K + +TC CGL+ CF D W G+ C++ + A+ + CP+CK +EK GCNH++C C Y WCWLC ++YT FHY+P N+FGCPG Q+ Sbjct: 281 CNHRYCKNCLYDYLEYNISNGQVR--VIKCADAQCKEEFTKEDVEKFGSKEIYDKYLKFKENIDVNLNPNLKWCPKPNCNNYISKGKKRK--VTC-KCGLEICF--------DCGIEW-----HGKIKCKEVMDKEFFSWAANNGNISN----CPKCKVRLEKISGCNHMTCRQCGYSWCWLCGKKYTDFHYNPINVFGCPGQQY 463 The following BLAST results are available for this feature:
BLAST of NO14G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01180 ID=NO14G01180|Name=NO14G01180|organism=Nannochloropsis oceanica|type=gene|length=4654bpback to top protein sequence of NO14G01180.1 >NO14G01180.1-protein ID=NO14G01180.1-protein|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=659bpback to top protein sequence of NO14G01180.2 >NO14G01180.2-protein ID=NO14G01180.2-protein|Name=NO14G01180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=538bpback to top Synonyms
Publications
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