NO14G01180.1, NO14G01180.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01180.1
Unique Name	NO14G01180.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4274
Alignment location	chr14:387244..391897 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:387244..391897 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G01180.1 vs.
Match: EWM24689.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana])

HSP 1 Score: 442.2 bits (1136), Expect = 2.800e-120
Identity = 213/329 (64.74%), Postives = 253/329 (76.90%), Query Frame = 0

Query:  331 VFGDDHLHKIVDPAILAKHQHRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAMDEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIEKDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIF-GCPGSQFVDFGGGAHGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALLGSALWLPVGVIWASLSKLCAGSPAAVSCLGGHWQMCDLIFPLVSGSRTFRQGNGAMGLVYVFVFLGSAPIVLSASLLLQVLWMPFVLFVFVVRASRRRRLQISFMLAPMLLAMQFLDLDGE 659
            ++ ++HL  +VDP +  KH+ R  L A+PSLRECP+C  + +GGSK RP L C +CGL FCFLHATAH + +         EG   CR+Y RQ+ A ERAS +TV+RISKPCP+CKAP EK+GGCNHISC  CR+EWCWLC+QRYTP+HYSPTNIF GCPG+QFVDFGGGA GCCC   APLCR+ R+LLA ILLP P  LG+VV ++G+ LWLPVGV+WA L KL A  P+ + C  G W   DL+FPLVSGS TFRQ NGAMG VYVFVFLG+AP+VL ASL+LQVLWMP  L V V+RASRRRRL+ SF+LAPMLL   FLDLDGE
Sbjct:   61 LYSENHLRALVDPDLFQKHEQRLKLRAQPSLRECPACQAVCEGGSKRRPLLVCAACGLSFCFLHATAHPVGK---------EGGAGCRRYLRQVEATERASKTTVRRISKPCPKCKAPTEKNGGCNHISCAQCRHEWCWLCEQRYTPYHYSPTNIFLGCPGAQFVDFGGGARGCCCRLGAPLCRLLRLLLAGILLPLPFALGVVVGVVGTVLWLPVGVLWACLGKLLATCPSGMPCFAGEWNAWDLLFPLVSGSHTFRQRNGAMGSVYVFVFLGAAPLVLVASLVLQVLWMPLALLVLVIRASRRRRLRPSFVLAPMLLITHFLDLDGE 380

The following BLAST results are available for this feature:

BLAST of NO14G01180.1 vs.

BLAST of NO14G01180.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24689.1	2.800e-120	64.74	ring-finger-containing e3 ubiquitin, partial [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G01180	NO14G01180	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01180.1	NO14G01180.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01180.1.cds1	NO14G01180.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01180.1.cds2	NO14G01180.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01180.1.cds3	NO14G01180.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:387244..391897+
coding sequence from alignment at chr14:387244..391897+

mRNA sequence

>NO14G01180.1 ID=NO14G01180.1|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=mRNA|length=4274bp
CGTCGTTTTGCAATCGTTCAAGATAAACATGTTATTTATACTCTTTCAGG
TTGATCCTATCGCTTGCGTCTTGTACCATGGTCATCCCAGGCCATGCAAT
ACCCTTTCCGTACTTTTGTATGCACATCCTTCATCAATTGGTACTCCCTC
CTCTACCCGCATCATGATTCTTCAAACGGCCAAGGCACCAAGCTTGCGGG
CAGCTTTTTCAAAGCCCTGCGAAAGACCACCACCTCCGCCCCACTACCTT
CCATAAACCTCACCAGTTTCAAGACTTTCCGCTCGTCGACCAACGCCCTC
ACAATCCTTCTGCCTTGTCCTCCTCCTCCAGTCATGCTATCCTCACCTTT
TCCTCCCAAGTGCTTTATAGGTTTATACCCTGCCACTGTCGTCACATCCA
CGGGGTGAGTCGCCCATACAGGTCCTCCGTGGTGGTGCGGCGACCAGCCT
TGATACAAAACCAACAGCCCATCGTCCTGCATCCACAAGAAATGAGGGGT
TGCGCACCCGTCTATTTCACTTTTACTTCCACCTCCAAGTCCAGCAGCGA
AGAGCCAGGGGTGACGACAGTTGGTCAGGTATTCACCAGTTTCCAGTGCA
GGACCACCGGGCATCAAGGCGGTCATGCTGCTTACTCGACAATGGTATTG
ATGAACAGGACGGAACGGGAGAAAGCGACTTGGAATCACTAGGTAAATGA
TGGCGATGGAAAAGACGAGCGAGAAGAGTAGTAACATTGAAAACGCCCTG
TAGGCAGACACCACAGTCCCCTCAGCCGCCGTCGTTCCTTCCTTCTTCTC
GTCCACTTCCCTGCCGCCCATCCCTACCAAACGGCGTACACAATCCAACA
CATTGGCCAGAGGCCCCCATTCTTCCAGCAGCTTCACCTGTGCTCGTGTC
TCTCGGATGGTGTCAGCGGCTACATCTAAAATTTCTTCCGTTTCTTCCTT
CTCTCGTTGCAAGCGCCCCAAGCTTACTCCCTGCTCATGCAATCTTTCCA
CACACTCGTTCAATATGGCGTCCTTGTTCTTCACCTCCTTTTCCAAACGT
CGGACCTCATCACTCAATTCGTCCACTTGCGACAGTAAACTTGCCTCTTT
CAATCGTTTCTTGGCCAGCTCGTCTCGCATCCGGACCCTTTGTCTTTCTA
GGACAAATTTGTGCGCGAGCTTGGCCTCGTCGTCTTTCGTCTCAACAGCC
GCAGTTGCCTCGTTGTCATTGTAGCCGGTTTGGGAACGATTGATGGTGTC
TTGATCTTGATCTTGTGAAAGGGAGGGAGGGTCAGGAATGGGGGTAGCGA
GCGGGGGGATGGACCGGCGGCAGAGGAAGCGTTTGAGCATTGCCTGTTGT
GACGACGGTTGATGGTTGCGACGGACAACGGCAAGTCGATGACCAGCGCC
CTGTGCCTGACTCCCTGTGCGTGTTTGTATTTATGCGCGGAGATCAGTGA
ACTTATGAAAAACCCATCCAGAGCAGCGAAGTGATTAGCAAAATGGGCTT
CTTGGTGGCGGACCGGGGATGCGGGCGCGCACAAGCCTGCTTTGTCGTCT
ACGGATCGGTGCGAGTGAAAGACAAGGGAAGCACGTGCAACGCACTCGAC
TGCTGAACTCACACCAGTGTCACATACTTAAAAGAAGCAACAGTAGCTGC
AGCAGGAGTGGCAGTTGGACGATTTCCTTTCTACTCGCAAGCTTTCGAGT
AACTACTCGAGTAATCTTGCCGCGGCTTGTGGGCCGAGACTGCAAAAATA
TCATCTCTCCTCTGCCTCACAGGGCGGGGAAATGCACGTGCACAGTGTGG
TCAGTCCTAAGCTGCGCACATTAGTATGTACCCGCAGAGAGGACATTATT
TCATTCGCATTTGTGCCCCCAGTTGCCTTCTTATCGGGGACTTTAATTTT
CTTTTCCCTTCCAAACCCACAGCGTCGACCTCCCCACCCCCCACGCGACA
TTCAGGTGCCGCGCGAGGCTGTATACGATCAACAAGCAAAAATGATGGAG
GCCTGGATACACGATGACTATTATCTCGCTGCTGGGGACAACAATAGCTG
CGATGATGTGCTGGAAAGTGGAGGGGGTAGTGCTACCGGTGGGCCCTCCT
CCTCCTCGACAGCCACTGCAAGTGCTATGAGGGCCAGCGCGGACATGCGC
GCCCACTCTACCATCAAGGCCTTCGTGCACCAGCTTACCGTCCCCCTCTC
CTCGCCCTCCCCTCCGCCGCCGTCGCTACCGTCAACGTCGGTACCAGAAG
AGCCCGTGTCCAACACCACCACCAGCAGCAGCAGCAGCAACAGTAGCAAC
AGTGACAGTATTCACAGTTGTCGCTGCAGCTACAAGGACGAGGGCGAGGA
CGAGGATGAGTTTGAGGACGTGGACCTGGAGACAGGGGACGCCTGCAGCA
CCACCAACGCTACGTTAGGGGAGAATGACGACGAACAGGAGGAAAACAAT
GGGCACGCTATCTGCCTGATTTGCTACGATGAGTTTCCGATGGATAAGAA
ACTCCCATGGACGATGCCTCCTCCTTCTCCTTCTTCTTCTTCCAGTCACA
GCAGTACTATGAGAGCGGGTTCTTTTCCCCCTCTTGCACCCCCTCCGCAG
CCTCCGCGCCCTGCCGTTTCTTCCTCCTCTGCATCCTTCCTAAGTCCCTC
TTCTCACTATTGCCCTCATTCCTATTGTGGAAGGTGCATCAAAACGTACT
TAGAGACACGCATCCACGAGGGTCGGGCGGAGCATCCTTGTCCCATGCGG
GGTGATGCAGGTTGCAATTTTGTTTTTGGCGACGATCATCTCCACAAGAT
CGTCGACCCTGCCATCCTAGCGAAGCACCAACATCGCGCCACCCTTCTCG
CCGAGCCCTCTCTCCGTGAGTGCCCTTCCTGCCACACCCTCGTCAAGGGC
GGTTCAAAGCACCGTCCCTCCCTCACCTGTCCCTCCTGCGGATTGAAATT
TTGTTTTCTGCACGCCACGGCCCATGCAATGGACGAAGTGAGACGGTGGG
AAGGGCGGAGGGGGGAAGGGAGACATAGTTGCCGTCAGTACAAGCGGCAG
ATGCGAGCAGTGGAGCGGGCAAGTGCCTCGACGGTAAAGAGGATTAGTAA
GCCTTGTCCCCAGTGCAAGGCGCCGATAGAGAAGGATGGTGGGTGCAATC
ATATTTCGTGCATTTCGTGCCGCTATGAGTGGTGCTGGTTGTGTGATCAG
CGCTATACGCCTTTCCACTACTCTCCTACCAACATTTTCGGGTGTCCCGG
TTCGCAATTCGTGGACTTTGGAGGAGGGGCTCACGGGTGCTGTTGTGGTT
TCATTGCACCGCTTTGTCGAGTCTTCCGTGTGCTGCTGGCATTGATTCTG
TTGCCGGGGCCGATGCTGTTGGGGATGGTGGTGGCGCTCTTAGGATCTGC
GTTGTGGCTGCCGGTAGGGGTGATTTGGGCGTCTCTTTCGAAGCTCTGCG
CCGGGTCACCGGCGGCAGTTTCGTGCTTGGGAGGGCACTGGCAGATGTGT
GATCTGATCTTTCCGCTGGTAAGTGGGAGCCGGACTTTCAGGCAGGGAAA
TGGCGCGATGGGTCTCGTATATGTGTTCGTCTTTTTGGGCTCGGCGCCGA
TCGTGTTGTCCGCGTCGTTGTTGCTACAGGTGCTGTGGATGCCCTTCGTC
CTGTTTGTGTTTGTGGTCCGGGCGAGCCGACGACGGCGATTGCAAATATC
ATTTATGCTTGCGCCTATGCTGTTGGCAATGCAATTCTTGGACTTGGATG
GGGAGTAGAAGGAGGGTGGAAAAGGAGGGAGGGAAGGAGGAAAGGAAGGA
GGGTAAGGACGGGCGACTACCGGTAGTCACCGTTTGTGCTTATGATGCCA
TGATGATGCGCGTGGATGATCATAGCATAAAAAGGAGGCAGGTTGATCGC
CGACAGTAAGCCTGGCTGTGATCTATATTCCTTCGGTTTGTTCCTTTGTT
TGGGGAAGCGAGTGCATATGATGAGGACCCAAAAGGGAACAAGGCGTAAG
AGTCGCTGTACCCGGCGGATCTTAGTTGAAAAATAAATAAGACCTTATTA
AAAGTGGTAAGAGGGATATAACGGGGCGATAGAGGCTCATATCAGATTTT
GTCCGTGATTGAGACAGAGAGCGGAAGAATGTGAAGCGGAATATGGGAAT
GGGGAGGTCGGCGTTGGCTGATCGAGGGAAGGATTGTTTGTGCATAAATT
GAGCTGACAAAAAAGGTGACACGTATGTGTCCCTGTGATCCCTCTTGGAG
TGCATGTTGTGGGTAATAGTCTGC

protein sequence of NO14G01180.1

>NO14G01180.1-protein ID=NO14G01180.1-protein|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=659bp
MHVHSVVSPKLRTLVCTRREDIISFAFVPPVAFLSGTLIFFSLPNPQRRP
PHPPRDIQVPREAVYDQQAKMMEAWIHDDYYLAAGDNNSCDDVLESGGGS
ATGGPSSSSTATASAMRASADMRAHSTIKAFVHQLTVPLSSPSPPPPSLP
STSVPEEPVSNTTTSSSSSNSSNSDSIHSCRCSYKDEGEDEDEFEDVDLE
TGDACSTTNATLGENDDEQEENNGHAICLICYDEFPMDKKLPWTMPPPSP
SSSSSHSSTMRAGSFPPLAPPPQPPRPAVSSSSASFLSPSSHYCPHSYCG
RCIKTYLETRIHEGRAEHPCPMRGDAGCNFVFGDDHLHKIVDPAILAKHQ
HRATLLAEPSLRECPSCHTLVKGGSKHRPSLTCPSCGLKFCFLHATAHAM
DEVRRWEGRRGEGRHSCRQYKRQMRAVERASASTVKRISKPCPQCKAPIE
KDGGCNHISCISCRYEWCWLCDQRYTPFHYSPTNIFGCPGSQFVDFGGGA
HGCCCGFIAPLCRVFRVLLALILLPGPMLLGMVVALLGSALWLPVGVIWA
SLSKLCAGSPAAVSCLGGHWQMCDLIFPLVSGSRTFRQGNGAMGLVYVFV
FLGSAPIVLSASLLLQVLWMPFVLFVFVVRASRRRRLQISFMLAPMLLAM
QFLDLDGE*

mRNA from alignment at chr14:387244..391897+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G01180.1 ID=NO14G01180.1|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=mRNA|length=4654bp|location=Sequence derived from alignment at chr14:387244..391897+ (Nannochloropsis oceanica)
CGTCGTTTTGCAATCGTTCAAGATAAACATGTTATTTATACTCTTTCAGG
TTGATCCTATCGCTTGCGTCTTGTACCATGGTCATCCCAGGCCATGCAAT
ACCCTTTCCGTACTTTTGTATGCACATCCTTCATCAATTGGTACTCCCTC
CTCTACCCGCATCATGATTCTTCAAACGGCCAAGGCACCAAGCTTGCGGG
CAGCTTTTTCAAAGCCCTGCGAAAGACCACCACCTCCGCCCCACTACCTT
CCATAAACCTCACCAGTTTCAAGACTTTCCGCTCGTCGACCAACGCCCTC
ACAATCCTTCTGCCTTGTCCTCCTCCTCCAGTCATGCTATCCTCACCTTT
TCCTCCCAAGTGCTTTATAGGTTTATACCCTGCCACTGTCGTCACATCCA
CGGGGTGAGTCGCCCATACAGGTCCTCCGTGGTGGTGCGGCGACCAGCCT
TGATACAAAACCAACAGCCCATCGTCCTGCATCCACAAGAAATGAGGGGT
TGCGCACCCGTCTATTTCACTTTTACTTCCACCTCCAAGTCCAGCAGCGA
AGAGCCAGGGGTGACGACAGTTGGTCAGGTATTCACCAGTTTCCAGTGCA
GGACCACCGGGCATCAAGGCGGTCATGCTGCTTACTCGACAATGGTATTG
ATGAACAGGACGGAACGGGAGAAAGCGACTTGGAATCACTAGGTAAATGA
TGGCGATGGAAAAGACGAGCGAGAAGAGTAGTAACATTGAAAACGCCCTG
TAGGCAGACACCACAGTCCCCTCAGCCGCCGTCGTTCCTTCCTTCTTCTC
GTCCACTTCCCTGCCGCCCATCCCTACCAAACGGCGTACACAATCCAACA
CATTGGCCAGAGGCCCCCATTCTTCCAGCAGCTTCACCTGTGCTCGTGTC
TCTCGGATGGTGTCAGCGGCTACATCTAAAATTTCTTCCGTTTCTTCCTT
CTCTCGTTGCAAGCGCCCCAAGCTTACTCCCTGCTCATGCAATCTTTCCA
CACACTCGTTCAATATGGCGTCCTTGTTCTTCACCTCCTTTTCCAAACGT
CGGACCTCATCACTCAATTCGTCCACTTGCGACAGTAAACTTGCCTCTTT
CAATCGTTTCTTGGCCAGCTCGTCTCGCATCCGGACCCTTTGTCTTTCTA
GGACAAATTTGTGCGCGAGCTTGGCCTCGTCGTCTTTCGTCTCAACAGCC
GCAGTTGCCTCGTTGTCATTGTAGCCGGTTTGGGAACGATTGATGGTGTC
TTGATCTTGATCTTGTGAAAGGGAGGGAGGGTCAGGAATGGGGGTAGCGA
GCGGGGGGATGGACCGGCGGCAGAGGAAGCGTTTGAGCATTGCCTGTTGT
GACGACGGTTGATGGTTGCGACGGACAACGGCAAGTCGATGACCAGCGCC
CTGTGCCTGACTCCCTGTGCGTGTTTGTATTTATGCGCGGAGATCAGTGA
ACTTATGAAAAACCCATCCAGAGCAGCGAAGTGATTAGCAAAATGGGCTT
CTTGGTGGCGGACCGGGGATGCGGGCGCGCACAAGCCTGCTTTGTCGTCT
ACGGATCGGTGCGAGTGAAAGACAAGGGAAGCACGTGCAACGCACTCGAC
TGCTGAACTCACACCAGTGTCACATACTTAAAAGAAGCAACAGTAGCTGC
AGCAGGAGTGGCAGTTGGACGATTTCCTTTCTACTCGCAAGCTTTCGAGT
AACTACTCGAGTAATCTTGCCGCGGCTTGTGGGCCGAGACTGCAAAAATA
TCATCTCTCCTCTGCCTCACAGGGCGGGGAAATGCACGTGCACAGTGTGG
TCAGTCCTAAGCTGCGCACATTAGTATGTACCCGCAGAGAGGACATTATT
TCATTCGCATTTGTGCCCCCAGTTGCCTTCTTATCGGGGACTTTAATTTT
CTTTTCCCTTCCAAACCCACAGCGTCGACCTCCCCACCCCCCACGCGACA
TTCAGGTGCCGCGCGAGGCTGTATACGATCAACAAGCAAAAATGATGGAG
GCCTGGATACACGATGACTATTATCTCGCTGCTGGGGACAACAATAGCTG
CGATGATGTGCTGGAAAGTGGAGGGGGTAGTGCTACCGGTGGGCCCTCCT
CCTCCTCGACAGCCACTGCAAGTGCTATGAGGGTATGCTTGTGTGTTGTG
GTGTACATTCCTTTGCTACGAATGCACTCGCCAGAGAGCGCAAAATAGCA
TATCTTCCAGACTTGTGCAGCTCAGCTAGCCCACTTGCACTATCCTCATT
GCCCTCATTTGTTACTTGACCCCTTCCGCTGTCTTGTCCCCGCTTTACCC
TGTCTCATCTTGCCTGTCTTCTTCGGACAATATCCTTCTTACAAAGGAAC
GTGAAAACGGCGTTCAATTTTCTCCACCTTTCCTCTCCCGCCATCTTTCC
CTAGGCCAGCGCGGACATGCGCGCCCACTCTACCATCAAGGCCTTCGTGC
ACCAGCTTACCGTCCCCCTCTCCTCGCCCTCCCCTCCGCCGCCGTCGCTA
CCGTCAACGTCGGTACCAGAAGAGCCCGTGTCCAACACCACCACCAGCAG
CAGCAGCAGCAACAGTAGCAACAGTGACAGTATTCACAGTTGTCGCTGCA
GCTACAAGGACGAGGGCGAGGACGAGGATGAGTTTGAGGACGTGGACCTG
GAGACAGGGGACGCCTGCAGCACCACCAACGCTACGTTAGGGGAGAATGA
CGACGAACAGGAGGAAAACAATGGGCACGCTATCTGCCTGATTTGCTACG
ATGAGTTTCCGATGGATAAGAAACTCCCATGGACGATGCCTCCTCCTTCT
CCTTCTTCTTCTTCCAGTCACAGCAGTACTATGAGAGCGGGTTCTTTTCC
CCCTCTTGCACCCCCTCCGCAGCCTCCGCGCCCTGCCGTTTCTTCCTCCT
CTGCATCCTTCCTAAGTCCCTCTTCTCACTATTGCCCTCATTCCTATTGT
GGAAGGTGCATCAAAACGTACTTAGAGACACGCATCCACGAGGGTCGGGC
GGAGCATCCTTGTCCCATGCGGGGTGATGCAGGTTGCAATTTTGTTTTTG
GGTGAGTGCTCCTGTTCAGGCAAGCCATCCTATACACTCCCTTTCTCCCT
CTCTCCCTCTCTTCCTCCCTCAAACGCTCTGTACCTCCTGCTTTCCCCTC
CCCTAACAGCGACGATCATCTCCACAAGATCGTCGACCCTGCCATCCTAG
CGAAGCACCAACATCGCGCCACCCTTCTCGCCGAGCCCTCTCTCCGTGAG
TGCCCTTCCTGCCACACCCTCGTCAAGGGCGGTTCAAAGCACCGTCCCTC
CCTCACCTGTCCCTCCTGCGGATTGAAATTTTGTTTTCTGCACGCCACGG
CCCATGCAATGGACGAAGTGAGACGGTGGGAAGGGCGGAGGGGGGAAGGG
AGACATAGTTGCCGTCAGTACAAGCGGCAGATGCGAGCAGTGGAGCGGGC
AAGTGCCTCGACGGTAAAGAGGATTAGTAAGCCTTGTCCCCAGTGCAAGG
CGCCGATAGAGAAGGATGGTGGGTGCAATCATATTTCGTGCATTTCGTGC
CGCTATGAGTGGTGCTGGTTGTGTGATCAGCGCTATACGCCTTTCCACTA
CTCTCCTACCAACATTTTCGGGTGTCCCGGTTCGCAATTCGTGGACTTTG
GAGGAGGGGCTCACGGGTGCTGTTGTGGTTTCATTGCACCGCTTTGTCGA
GTCTTCCGTGTGCTGCTGGCATTGATTCTGTTGCCGGGGCCGATGCTGTT
GGGGATGGTGGTGGCGCTCTTAGGATCTGCGTTGTGGCTGCCGGTAGGGG
TGATTTGGGCGTCTCTTTCGAAGCTCTGCGCCGGGTCACCGGCGGCAGTT
TCGTGCTTGGGAGGGCACTGGCAGATGTGTGATCTGATCTTTCCGCTGGT
AAGTGGGAGCCGGACTTTCAGGCAGGGAAATGGCGCGATGGGTCTCGTAT
ATGTGTTCGTCTTTTTGGGCTCGGCGCCGATCGTGTTGTCCGCGTCGTTG
TTGCTACAGGTGCTGTGGATGCCCTTCGTCCTGTTTGTGTTTGTGGTCCG
GGCGAGCCGACGACGGCGATTGCAAATATCATTTATGCTTGCGCCTATGC
TGTTGGCAATGCAATTCTTGGACTTGGATGGGGAGTAGAAGGAGGGTGGA
AAAGGAGGGAGGGAAGGAGGAAAGGAAGGAGGGTAAGGACGGGCGACTAC
CGGTAGTCACCGTTTGTGCTTATGATGCCATGATGATGCGCGTGGATGAT
CATAGCATAAAAAGGAGGCAGGTTGATCGCCGACAGTAAGCCTGGCTGTG
ATCTATATTCCTTCGGTTTGTTCCTTTGTTTGGGGAAGCGAGTGCATATG
ATGAGGACCCAAAAGGGAACAAGGCGTAAGAGTCGCTGTACCCGGCGGAT
CTTAGTTGAAAAATAAATAAGACCTTATTAAAAGTGGTAAGAGGGATATA
ACGGGGCGATAGAGGCTCATATCAGATTTTGTCCGTGATTGAGACAGAGA
GCGGAAGAATGTGAAGCGGAATATGGGAATGGGGAGGTCGGCGTTGGCTG
ATCGAGGGAAGGATTGTTTGTGCATAAATTGAGCTGACAAAAAAGGTGAC
ACGTATGTGTCCCTGTGATCCCTCTTGGAGTGCATGTTGTGGGTAATAGT
CTGC

Coding sequence (CDS) from alignment at chr14:387244..391897+

>NO14G01180.1 ID=NO14G01180.1|Name=NO14G01180.1|organism=Nannochloropsis oceanica|type=CDS|length=1977bp|location=Sequence derived from alignment at chr14:387244..391897+ (Nannochloropsis oceanica)
ATGCACGTGCACAGTGTGGTCAGTCCTAAGCTGCGCACATTAGTATGTAC
CCGCAGAGAGGACATTATTTCATTCGCATTTGTGCCCCCAGTTGCCTTCT
TATCGGGGACTTTAATTTTCTTTTCCCTTCCAAACCCACAGCGTCGACCT
CCCCACCCCCCACGCGACATTCAGGTGCCGCGCGAGGCTGTATACGATCA
ACAAGCAAAAATGATGGAGGCCTGGATACACGATGACTATTATCTCGCTG
CTGGGGACAACAATAGCTGCGATGATGTGCTGGAAAGTGGAGGGGGTAGT
GCTACCGGTGGGCCCTCCTCCTCCTCGACAGCCACTGCAAGTGCTATGAG
GGCCAGCGCGGACATGCGCGCCCACTCTACCATCAAGGCCTTCGTGCACC
AGCTTACCGTCCCCCTCTCCTCGCCCTCCCCTCCGCCGCCGTCGCTACCG
TCAACGTCGGTACCAGAAGAGCCCGTGTCCAACACCACCACCAGCAGCAG
CAGCAGCAACAGTAGCAACAGTGACAGTATTCACAGTTGTCGCTGCAGCT
ACAAGGACGAGGGCGAGGACGAGGATGAGTTTGAGGACGTGGACCTGGAG
ACAGGGGACGCCTGCAGCACCACCAACGCTACGTTAGGGGAGAATGACGA
CGAACAGGAGGAAAACAATGGGCACGCTATCTGCCTGATTTGCTACGATG
AGTTTCCGATGGATAAGAAACTCCCATGGACGATGCCTCCTCCTTCTCCT
TCTTCTTCTTCCAGTCACAGCAGTACTATGAGAGCGGGTTCTTTTCCCCC
TCTTGCACCCCCTCCGCAGCCTCCGCGCCCTGCCGTTTCTTCCTCCTCTG
CATCCTTCCTAAGTCCCTCTTCTCACTATTGCCCTCATTCCTATTGTGGA
AGGTGCATCAAAACGTACTTAGAGACACGCATCCACGAGGGTCGGGCGGA
GCATCCTTGTCCCATGCGGGGTGATGCAGGTTGCAATTTTGTTTTTGGCG
ACGATCATCTCCACAAGATCGTCGACCCTGCCATCCTAGCGAAGCACCAA
CATCGCGCCACCCTTCTCGCCGAGCCCTCTCTCCGTGAGTGCCCTTCCTG
CCACACCCTCGTCAAGGGCGGTTCAAAGCACCGTCCCTCCCTCACCTGTC
CCTCCTGCGGATTGAAATTTTGTTTTCTGCACGCCACGGCCCATGCAATG
GACGAAGTGAGACGGTGGGAAGGGCGGAGGGGGGAAGGGAGACATAGTTG
CCGTCAGTACAAGCGGCAGATGCGAGCAGTGGAGCGGGCAAGTGCCTCGA
CGGTAAAGAGGATTAGTAAGCCTTGTCCCCAGTGCAAGGCGCCGATAGAG
AAGGATGGTGGGTGCAATCATATTTCGTGCATTTCGTGCCGCTATGAGTG
GTGCTGGTTGTGTGATCAGCGCTATACGCCTTTCCACTACTCTCCTACCA
ACATTTTCGGGTGTCCCGGTTCGCAATTCGTGGACTTTGGAGGAGGGGCT
CACGGGTGCTGTTGTGGTTTCATTGCACCGCTTTGTCGAGTCTTCCGTGT
GCTGCTGGCATTGATTCTGTTGCCGGGGCCGATGCTGTTGGGGATGGTGG
TGGCGCTCTTAGGATCTGCGTTGTGGCTGCCGGTAGGGGTGATTTGGGCG
TCTCTTTCGAAGCTCTGCGCCGGGTCACCGGCGGCAGTTTCGTGCTTGGG
AGGGCACTGGCAGATGTGTGATCTGATCTTTCCGCTGGTAAGTGGGAGCC
GGACTTTCAGGCAGGGAAATGGCGCGATGGGTCTCGTATATGTGTTCGTC
TTTTTGGGCTCGGCGCCGATCGTGTTGTCCGCGTCGTTGTTGCTACAGGT
GCTGTGGATGCCCTTCGTCCTGTTTGTGTTTGTGGTCCGGGCGAGCCGAC
GACGGCGATTGCAAATATCATTTATGCTTGCGCCTATGCTGTTGGCAATG
CAATTCTTGGACTTGGATGGGGAGTAG

Synonyms

Publications