NO14G00960, NO14G00960 (gene) Nannochloropsis oceanica

Overview
NameNO14G00960
Unique NameNO14G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2253
Alignment locationchr14:325435..327687 -

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Properties
Property NameValue
DescriptionL-serine ammonia-lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:325435..327687 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016829lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Homology
BLAST of NO14G00960 vs. NCBI_GenBank
Match: XP_005716956.1 (similar to serine dehydratase [Chondrus crispus] >CDF37137.1 similar to serine dehydratase [Chondrus crispus])

HSP 1 Score: 254.6 bits (649), Expect = 5.500e-64
Identity = 161/360 (44.72%), Postives = 216/360 (60.00%), Query Frame = 0
Query:   69 PGGEAMRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVES-GIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAA-GKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMERSLG 427
            P  E M I++PL+ S S+S+  +   + LKLD LQP+GSFK RG   LC+S    G R  +SSSGGNAG + A  G++L +PV +IVP++T   M+++++  GA V V G  W+EAD  AR +VE+         EG  A +I P+DHPLLW+GH+SLV+EL +    +KPAAIV SVGGGGL  G+ EG  R         GW DV +V AETEGAASFAA +AA G+VV+L+ ISS+A SLGAL V+ +                          R ++  VVSD++AV AC      HR+LVEPACGAA+A V        LK +   +G  P+VVVVCGG+  +P +L    ++ G
Sbjct:   34 PPQEKMHIRTPLVPSPSISA-PSGRQVLLKLDNLQPAGSFKIRGHGHLCSSAAANGVRHFVSSSGGNAGAAVAHAGQVLAVPVTIIVPSSTPQFMIDRLKESGASVVVHGAVWDEADRYAREIVER---------EGPNAIHISPFDHPLLWEGHASLVEELKDDLAGKKPAAIVVSVGGGGLFLGVAEGTRRV--------GWGDVPIVTAETEGAASFAAMVAAGGEVVQLKEISSVAKSLGALAVSDKCAQWVREG------------------RKVVPVVVSDREAVEACSLLAVKHRVLVEPACGAAIAAV--------LKGVDVGEG--PIVVVVCGGNMASPALLQGWIKATG 347          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: OJV08160.1 (hypothetical protein BGO14_01690 [Chlamydiales bacterium 38-26])

HSP 1 Score: 254.6 bits (649), Expect = 5.500e-64
Identity = 149/353 (42.21%), Postives = 206/353 (58.36%), Query Frame = 0
Query:   76 IKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCAS-LQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMERSLGL 428
            I +PL+ S  M        IYLKL+ LQP+GSFK RG+ TLC+   Q +  +  +SSSGGNA L+ A  G++L+ PV +IVP TT PLM+EK++    +V V G +WN ADA AR L ++               YIPP+DHPL+W GHS+++ E+ ++G+ KP AIV +VGGGGLLCG+ EGL           GW+++ V  AETEGAASFAA +  G+++ L+ I ++ATSLGA  V  QA                           I+ ++VSD+ A+ A  RF  +H +LVEPACGAALAL+Y K        + D      +VV+VCGG G+T  ++ +    LGL
Sbjct:    6 ISTPLVKSIKMGK-SFQGQIYLKLETLQPTGSFKCRGIGTLCSHYAQNENCKGFVSSSGGNASLAVAYAGQVLDKPVEIIVPQTTLPLMIEKMQRLNTKVCVQGADWNAADAHARLLAKRLDWH-----------YIPPFDHPLIWNGHSTIIHEIKDTGL-KPDAIVVAVGGGGLLCGLIEGLRTV--------GWSEIPVFSAETEGAASFAASIKKGQLITLDSIDTIATSLGAKRVANQA-------------------WVDAKTHPIIPKIVSDRQALQAVIRFFDEHNILVEPACGAALALIYEK--------IVDPTLYPNIVVIVCGGKGVTLNLIEKWSEKLGL 310          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: OEU16130.1 (tryptophan synthase beta subunit-like PLP-dependent enzyme [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 253.8 bits (647), Expect = 9.300e-64
Identity = 161/357 (45.10%), Postives = 207/357 (57.98%), Query Frame = 0
Query:   70 GGEAMRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVES-------GIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFA-AGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEIL 419
            G E +  ++PLI S  +++L    P+YLKLD LQ SGSFKDRGMA LCA+ Q++GA  LISSSGGNAGL+ A  G  L L V VIVP TTKPL+LEK+++ GA+V V G NWNEAD  AR  V         D     + Y+ PYD+PLLW GHS++VDE+ +                  SVGGGGLLCG+ EG +R +             V+ +ET GA+ F  A  A G  + L GI S+ATSLGA   TP AL                       +    +   +D++A+ AC RF +DHR+LVEPACGAALA+ YSKR R+    L D  G  P+V+ VCGGSG+  ++L
Sbjct:   13 GAENLFSETPLIRSEPLTALVGK-PVYLKLDALQASGSFKDRGMAHLCATYQREGATELISSSGGNAGLAVATVGSRLGLGVSVIVPETTKPLVLEKLKSLGAKVTVHGKNWNEADTLARKRV---------DANPDDSKYVSPYDNPLLWTGHSTIVDEISDQLNIDXXXXXXXXXXXXXSVGGGGLLCGVLEGCARRK---------LRTKVITSETNGASCFVQAYDAGGGPITLPGIDSIATSLGATSCTPVAL-----------------DRARSHDGGFAATACTDEEAIDACVRFARDHRMLVEPACGAALAVAYSKRLRD--IHLKDVDG--PIVLEVCGGSGVDLDLL 329          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_095623298.1 (serine dehydratase [Halomonas sp. WRN001] >PAU74312.1 serine dehydratase [Halomonas sp. WRN001])

HSP 1 Score: 253.1 bits (645), Expect = 1.600e-63
Identity = 155/351 (44.16%), Postives = 210/351 (59.83%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMERS 425
            + I++PLI S +M S+ +   ++LKLD LQPSGSFK RG+   C +   +GARR ISSSGGNAGL+ A  GR L +PV V+VP TT     E ++ + A+V V G +W EA+A A+ L++               A++ P+D PLLWQGH++L+DE+  SG+ KP A+V SVGGGGLL G+ EGL         R GW+D+ V+  ET GAASF + + AG  V LE I+S+ATSLGA  V  QA                        +  + S VVSD+ A+ AC RFL DHR+LVEPACGA+LA+VY       LK+ S+      ++VVVCGG+  T + +   E+S
Sbjct:    3 LHIETPLIESCTM-SVTSGRSVWLKLDALQPSGSFKIRGIGYACETCLSRGARRFISSSGGNAGLAVAYAGRRLGVPVTVVVPETTTERAKELLQLEKAQVIVHGTSWQEANAFAQSLIDVSD------------AFLHPFDDPLLWQGHATLIDEVFRSGL-KPDAVVLSVGGGGLLSGVIEGLH--------RNGWSDIPVLAVETMGAASFNSAVRAGHTVELEQITSIATSLGAKRVCEQAF-------------------QWSKDHPVRSVVVSDQSALSACERFLDDHRILVEPACGASLAVVY--ENSPELKSFSN------ILVVVCGGATSTVDQIRVGEKS 304          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_043356423.1 (serine dehydratase [Cupriavidus basilensis] >AJG24322.1 L-serine dehydratase, (PLP)-dependent or Threonine dehydratase biosynthetic [Cupriavidus basilensis])

HSP 1 Score: 252.7 bits (644), Expect = 2.100e-63
Identity = 151/351 (43.02%), Postives = 210/351 (59.83%), Query Frame = 0
Query:   73 AMRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMER 424
            ++ I +PL+ S S S+      ++ K++ LQP GSFK RG+   C + ++ GA+RL+ SSGGNAG++ A  GR+L +PV V+VP TT     E+I A+GAE+ V+G  W+EA+  A  L+              + A+I P+D PLLW+GH++++DE+  +G+ KP A+V SVGGGGLLCG+  GL         R GW DV V+ AET GA S+AA +AAG  V L  I+S+ATSLGA     +AL                          I+SEVV+DK+AV AC RFL +HR++VEPACGAALA +  +R    + A SD      V+V+VCGG+G T E L   +R
Sbjct:   11 SLHIVTPLLRSTSFSA-RLGRSVWFKMEALQPPGSFKARGIGHACQTYKEWGAKRLVCSSGGNAGIAVAYSGRLLGVPVTVVVPETTSAAARERIAAEGAELVVYGRAWSEANDHALSLMRP------------EYAFIHPFDDPLLWEGHATMIDEVAAAGV-KPGAVVLSVGGGGLLCGVLAGLE--------RNGWHDVPVIAAETVGADSYAASLAAGAQVELPAITSIATSLGARSPCAKALEWSKV-------------------HSIVSEVVTDKEAVGACLRFLAEHRIVVEPACGAALAAL--ERKPAAVTAASD------VLVIVCGGAGATAEQLQAWDR 312          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_043200088.1 (serine dehydratase [Pseudomonas putida])

HSP 1 Score: 252.7 bits (644), Expect = 2.100e-63
Identity = 163/343 (47.52%), Postives = 202/343 (58.89%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPE 417
            + I +PLI S SM SL     I+LKLD LQP GSFK RG+   C   Q +GAR+ ISSSGGNAGL+ A  GR L +PV V+VP TT     E +R + A V V G++W EA+A A+ LV            G   A+I P+D PLLW GH+SL+DE+ ++G+ KP A+V SVGGGGLL G+ EGL         R GW DV V+  ET GAAS  A M AG  V LE ++S+ATSLGA  V  QALA                      +  + S +VSD+ A+ AC RFL DHRLLVEPACGAALAL Y+        AL+  +    V+VVVCGG+  T E
Sbjct:    3 LHIHTPLIESRSM-SLAAGRNIWLKLDALQPCGSFKLRGVGHACEVHQARGARQFISSSGGNAGLAVAYAGRKLGVPVTVVVPETTTERAKELLRQEDANVVVHGSSWQEANALAQTLV------------GPDDAFIHPFDDPLLWAGHASLIDEVAQAGV-KPDAVVLSVGGGGLLSGVVEGLQ--------RNGWGDVPVLAVETHGAASLHAAMQAGHSVELERLASVATSLGAKRVADQALA-------------------CTQQHPVHSHLVSDRAALEACERFLLDHRLLVEPACGAALALAYAP------GALAQYQN---VLVVVCGGATATLE 295          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_085591182.1 (serine dehydratase [Pseudomonas sp. B14(2017)])

HSP 1 Score: 252.3 bits (643), Expect = 2.700e-63
Identity = 161/343 (46.94%), Postives = 202/343 (58.89%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPE 417
            + I +PLI S  + SL     I+LKLD LQP GSFK RG+   C     +GAR  +SSSGGNAGL+ A  GR L +PV V+VP TT     + +R +GA++EV G++W EA+A A+ LV            G   A+I P+D PLLW GH+SLVDE+ E+G+ KP A+V SVGGGGLL G+ EGL         R GW DV V+  ETEGAAS  A M AG  V LE I+S+ATSLGA  V  QAL                       E  + S +V+D+ A+ AC RFL DHR+LVEPACGAALAL Y+        AL+  +    V+VVVCGG+  T E
Sbjct:    3 LHIHTPLIESRPL-SLAAGSNIWLKLDALQPCGSFKLRGVGHACEVHHARGARHFVSSSGGNAGLAVAYAGRKLGVPVTVVVPETTTERAKDLLRLEGAKLEVHGSSWQEANALAQTLV------------GPDDAFIHPFDDPLLWAGHASLVDEVAEAGV-KPDAVVLSVGGGGLLTGVVEGLQ--------RNGWGDVPVLAVETEGAASLHAAMQAGHSVELERIASVATSLGAKRVADQALV-------------------CVKEHPVHSHLVTDRAALEACERFLLDHRVLVEPACGAALALAYAP------GALAQYQN---VLVVVCGGATATLE 295          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_085663657.1 (serine dehydratase [Pseudomonas sp. B5(2017)])

HSP 1 Score: 252.3 bits (643), Expect = 2.700e-63
Identity = 159/343 (46.36%), Postives = 202/343 (58.89%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPE 417
            + + +PLI S  + SL     ++LKLD LQP GSFK RG+   C     +GAR  +SSSGGNAGL+ A  GR L +PV V+VP TT     + +R +GA++EV G++W EA+A A+ LV            G   A+I P+D PLLW GH+SLVDE+ E+G+ KP A+V SVGGGGLL G+ EGL         R GW DV V+  ETEGAAS  A M AG  V LE I+S+ATSLGA  V  QAL                       E  + S +V+D+ A+ AC RFL DHR+LVEPACGAALAL Y+        AL+  +    V+VVVCGG+  T E
Sbjct:    3 LHVHTPLIESRPL-SLAAGSNVWLKLDALQPCGSFKLRGVGHACEVHHARGARHFVSSSGGNAGLAVAYAGRKLGVPVTVVVPETTTERAKDLLRLEGAKLEVHGSSWQEANALAQTLV------------GPDDAFIHPFDEPLLWAGHASLVDEVAEAGV-KPDAVVLSVGGGGLLSGVVEGLQ--------RNGWGDVPVLAVETEGAASLHAAMQAGHSVELERIASVATSLGAKRVADQALV-------------------CVKEHPVHSHLVTDRAALEACERFLLDHRVLVEPACGAALALAYAS------GALAQYQN---VLVVVCGGATATLE 295          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_085704837.1 (serine dehydratase [Pseudomonas sp. B8(2017)])

HSP 1 Score: 252.3 bits (643), Expect = 2.700e-63
Identity = 161/343 (46.94%), Postives = 202/343 (58.89%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPE 417
            + I +PLI S  + SL     I+LKLD LQP GSFK RG+   C     +GAR  +SSSGGNAGL+ A  GR L +PV V+VP TT     + +R +GA++EV G++W EA+A A+ LV            G   A+I P+D PLLW GH+SLVDE+ E+G+ KP A+V SVGGGGLL G+ EGL         R GW DV V+  ETEGAAS  A M AG  V LE I+S+ATSLGA  V  QAL                       E  + S +V+D+ A+ AC RFL DHR+LVEPACGAALAL Y+        AL+  +    V+VVVCGG+  T E
Sbjct:    3 LHIHTPLIESRPL-SLAAGSNIWLKLDALQPCGSFKLRGVGHACEVHHARGARHFVSSSGGNAGLAVAYAGRKLGVPVTVVVPETTTERAKDLLRLEGAKLEVHGSSWQEANALAQTLV------------GPDDAFIHPFDDPLLWAGHASLVDEVAEAGV-KPDAVVLSVGGGGLLSGVVEGLQ--------RNGWGDVPVLAVETEGAASLHAAMQAGHSVELERIASVATSLGAKRVADQALV-------------------CVKEHPVHSHLVTDRAALEACERFLLDHRVLVEPACGAALALAYAP------GALAQYQN---VLVVVCGGATATLE 295          
BLAST of NO14G00960 vs. NCBI_GenBank
Match: WP_020682389.1 (hypothetical protein [Marinobacterium rhizophilum])

HSP 1 Score: 251.1 bits (640), Expect = 6.000e-63
Identity = 156/352 (44.32%), Postives = 204/352 (57.95%), Query Frame = 0
Query:   74 MRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAXXXXXXXXXXXXXXXXXXXXXXERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMERSL 426
            + I++PL+ S ++ SL    PI+LKL+ LQP GSFK RG+   C    ++GA+RL+SSSGGNAG++ A  GR L +PV V+VP TT    +E IR Q AEV V G +W EA+A A  L+            G   A + P+D PLLWQGH+S++DE+  +G+ KP  +V SVGGGGLLCG+ EGL R+        GW DV V+  ETEGAAS AA + AG  V L  ISS+ATSLGA +V  QA                           I + VVSD+ AV AC RF+ DHRL+VEPACGA+LA +Y     E L +         ++V+VCGG   T + L    + L
Sbjct:    3 LHIETPLLESRAL-SLGAKRPIWLKLEALQPPGSFKIRGIGHACTEYVRRGAKRLVSSSGGNAGIAVAYAGRHLQVPVLVVVPETTSARAIELIRQQDAEVRVHGASWQEANALALSLI------------GETDAMLHPFDDPLLWQGHASMIDEVARTGL-KPELVVLSVGGGGLLCGVLEGLHRH--------GWQDVPVLAVETEGAASLAAAVKAGAPVELPSISSIATSLGARQVCDQAF-------------------DWTSRHPIQNLVVSDQAAVDACLRFMDDHRLVVEPACGASLAAIYDH--AELLLSYHS------ILVIVCGGVTATVQQLQHWAQPL 305          
The following BLAST results are available for this feature:
BLAST of NO14G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005716956.15.500e-6444.72similar to serine dehydratase [Chondrus crispus] >... [more]
OJV08160.15.500e-6442.21hypothetical protein BGO14_01690 [Chlamydiales bac... [more]
OEU16130.19.300e-6445.10tryptophan synthase beta subunit-like PLP-dependen... [more]
WP_095623298.11.600e-6344.16serine dehydratase [Halomonas sp. WRN001] >PAU7431... [more]
WP_043356423.12.100e-6343.02serine dehydratase [Cupriavidus basilensis] >AJG24... [more]
WP_043200088.12.100e-6347.52serine dehydratase [Pseudomonas putida][more]
WP_085591182.12.700e-6346.94serine dehydratase [Pseudomonas sp. B14(2017)][more]
WP_085663657.12.700e-6346.36serine dehydratase [Pseudomonas sp. B5(2017)][more]
WP_085704837.12.700e-6346.94serine dehydratase [Pseudomonas sp. B8(2017)][more]
WP_020682389.16.000e-6344.32hypothetical protein [Marinobacterium rhizophilum][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002259NSK002259Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00960.1NO14G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528499gene_5664Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100272g2gene5747Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00960.1NO14G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00960 ID=NO14G00960|Name=NO14G00960|organism=Nannochloropsis oceanica|type=gene|length=2253bp
TCAGAGATCAGGAAGTCTCTGTCTTTGCGTGCGGGGTGTCGATGCGGAGG
AATGATTAAGAATGCGAGAGCAGGCTGGCTTCAAGGTCAACCACACACAG
AACAAAAGGAAGAAAGGATATACATGTGCCTTTCCCGCCATCATTTGCGA
TACCCGCGACGCTGTCCGTGCCAGAGTTGTGAGCCGCCACGACGCTGGGG
AGTAAAGTGGCTGCGGTACGCTTCGTGGATTGTCGGGGTTGATGCCTTGG
TGTCCTAGCAAATGTGCAGGAAAGGAAGAGCGAGAAGAAGTACTGCACTC
GCGTGATGATAGAGGGAGTCGTCGGTCGTCGCTGTCGCCGGTGGAACCCA
AAACCACGCGTTTTGAGGCGGCAGCATATGGACAATACCTTTCAGGACAA
AACCATCGTGTGAGTGATCACCTACTTGCCTAGTTCAATCGGCTTCGGGG
TTTGCATACTTTTGTTTTATTTATTGAACCTACCCCGTCCGACCTCCCCA
CCCCATTTCTTCAGCCGCACTAACTCTCACGCCCGGATACTGAAACTCAA
TGCGTACACAAACACAGGGGTGGGTCTGTGCCAGTGGATCCCTTCGTCAT
TCCTTTATTGTCACAAGACAGCAGGAGCAATATCATTATCAGGAGCACCA
GCCATGGTCCTTCTTACCGGGTTCCTCAAAATGATGGGTACCGCCTCAGT
TGCCCTGACGGTAGGCACCACCAGTCAAACCGCTAGTCGAGGGCTTGCAT
CCTCTTTTTCGTCCACCACTATCACCCCTGCCCCCGCTGCTGTCACTGCA
GACCCGACTATCAACGCCGTGACCGCGACGGCAGTGGCGGCGGCCATTAC
GGGAGGACCAGGCGGGGAGGCCATGCGGATCAAGTCACCTTTGATCTATT
CCTTCTCTATGTCTAGCCTCGAAAATgtacgtcccttatacacattgagg
catccacacatcatctgtccatcctgtatttcgtcttgtgatttctccat
cccgatctctttccaacgcactcacttccccctccctccctccctccctc
cccccctccctccctcgcagTCTCCCCCCATATACCTAAAGCTTGACGTC
TTACAACCTTCCGGCTCCTTTAAAGACCGAGGTATGGCTACGCTCTGCGC
CTCTCTGCAGCAGCAAGGTGCGCGTCGCCTTATTTCCTCCTCGGGGGGGA
ACGCTGGCTTGAGCGCCGCATTGTGTGGGCGTATCTTGAATCTCCCAGTG
AGGGTGATTGTCCCCACGACGACCAAGCCTTTAATGCTGGAGAAAATTAG
GGCTCAAGGCGCGGAAGTGGAGGTATTTGGGAACAACTGGAATGAGGCCG
ATGCCCGGGCACGGTGGCTGGTGGAGAAGGGAGGGAGGGAGGGGGGGGAA
GACGGGGAGGGAGGGCAGGCGGCGTACATTCCGCCGTACGACCACCCTCT
CTTGTGGCAGGGACACAGTTCTCTGGTGGATGAGTTAGTGGAAAGTGGAA
TCGAGAAACCGGCCGCCATCGTGGCGAGTGTGGGGGGAGGCGGGTTGTTG
TGTGGCATTTTTGAAGGACTCAGCAGGTATGAGAAGGGGGAGGACGGGAG
GGAGGGCTGGGCGGACGTAGGGGTGGTAGGAGCAGAGACGGAGGGCGCTG
CGTCGTTTGCGGCCGGGATGGCGGCAGGGAAGGTGGTGAGGTTGGAAGGG
ATTTCGTCTCTGGCTACCTCCCTGGGGGCCTTGGAGGTGACTCCGCAGGC
ACTCGCATACGCGTTGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GAGAAGGAGGGGTGGGGAGTGGGGAGAGGGTAATCTTGAGCGAGGTGGTT
AGTGATAAGGACGCGGTACATGCTTGTAGGAGATTTCTGCAAGACCATCG
GCTTTTGGTTGAGCCGGCGTGTGGCGCGGCGCTGGCGTTGGTGTATTCGA
AGAGGGGCAGGGAGAGACTGAAGGCCCTGTCAGACGCCAAGGGGGGAAAG
CCGGTGGTGGTGGTGGTGTGTGGGGGCAGTGGGATCACGCCAGAAATACT
GGCAGAGATGGAGAGGAGCCTTGGGTTGGCGGCATGAGGAGGGAGGGAGG
GAGGGAGAGAGGGAGGGAGGGAAGGGATATACGATGTATAGAGAAGGTCA
CAGAGATATTAGGAAGTGCGAAGAAATGAAGCTTATAGAAGAAAGTGAGA
AAGCCAAGGCATAGAAACATATATAATTTAATGAAATAGATCTATCCAAA
TGA
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protein sequence of NO14G00960.1

>NO14G00960.1-protein ID=NO14G00960.1-protein|Name=NO14G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MVLLTGFLKMMGTASVALTVGTTSQTASRGLASSFSSTTITPAPAAVTAD
PTINAVTATAVAAAITGGPGGEAMRIKSPLIYSFSMSSLENSPPIYLKLD
VLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLP
VRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGG
EDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGL
LCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLE
GISSLATSLGALEVTPQALAYALKGGREGGREGGREGGVGSGERVILSEV
VSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGG
KPVVVVVCGGSGITPEILAEMERSLGLAA*
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Synonyms
Publications