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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:325435..327687 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G00960.1 vs.
Match: EWM24737.1 (l-serine ammonia-lyase [Nannochloropsis gaditana]) HSP 1 Score: 558.1 bits (1437), Expect = 2.300e-155 Identity = 315/442 (71.27%), Postives = 360/442 (81.45%), Query Frame = 0
Query: 1 MVLLTGFLKMMGTASVALTVGTTSQTASRGLAS-SFSSTTITPAPAA-VTADPTINAVTAT---AVAAAITGG---PGGEAMRIKSPLIYSFSMSSLENSPPIYLKLDVLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLPVRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGGEDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESG-----IEKPAAIVASVGGGGLLCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLEGISSLATSLGALEVTPQALAYALKGGREGGREGGREGGVGSGERVILSEVVSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGGKPVVVVVCGGSGITPEILAEMERSLGLAA 430
MVL TGFLKM+GTASVALT G+T+ +SRGL + S+ + +P A +T +P+ ++ A +AA TG PG EAMR+KSPLIYS MSSLEN+PPIYLKLD LQPSGSFKDRGMATLC++LQ+QGARRL+SSSGGNAGLSAALCGRIL +PV+VIVP+TTKPLMLEKIRAQGA+VEVFG NWNEADARARW+VE+GGREGG + AYIPPYDHPLLW+GHS+LVDELVE G E PAAIVASVGGGGLLCGI+EGLSRYE GR GW DVGVVG ETEGAASFAAG+AAG+VVRL I ++ATSLGALEVTP+AL YA R GGR GGR+GG G R+ LSEVV+D +AV ACR FL+DHRLLVEPACGAALALVYS R R+RLKA S AKGG+PVV+VVCGGSGITPEIL EMER LG+ +
Sbjct: 1 MVLCTGFLKMIGTASVALT-GSTTGLSSRGLTTLSYVPPSASPTIMADITTNPSTSSTPAAPSPGIAATGTGARRSPGKEAMRVKSPLIYSHPMSSLENAPPIYLKLDALQPSGSFKDRGMATLCSTLQRQGARRLVSSSGGNAGLSAALCGRILGMPVQVIVPSTTKPLMLEKIRAQGAKVEVFGKNWNEADARARWVVEEGGREGGPEA----VAYIPPYDHPLLWEGHSTLVDELVEGGREGGMEEAPAAIVASVGGGGLLCGIYEGLSRYE----GRAGWEDVGVVGVETEGAASFAAGLAAGEVVRLTEIQTVATSLGALEVTPRALEYA----RSGGRAGGRDGGQDKGPRLTLSEVVTDAEAVQACRAFLRDHRLLVEPACGAALALVYSPRLRKRLKAWSAAKGGRPVVIVVCGGSGITPEILVEMERGLGVGS 429
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G00960.1 ID=NO14G00960.1|Name=NO14G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp
TCAGAGATCAGGAAGTCTCTGTCTTTGCGTGCGGGGTGTCGATGCGGAGG
AATGATTAAGAATGCGAGAGCAGGCTGGCTTCAAGGTCAACCACACACAG
AACAAAAGGAAGAAAGGATATACATGTGCCTTTCCCGCCATCATTTGCGA
TACCCGCGACGCTGTCCGTGCCAGAGTTGTGAGCCGCCACGACGCTGGGG
AGTAAAGTGGCTGCGGTACGCTTCGTGGATTGTCGGGGTTGATGCCTTGG
TGTCCTAGCAAATGTGCAGGAAAGGAAGAGCGAGAAGAAGTACTGCACTC
GCGTGATGATAGAGGGAGTCGTCGGTCGTCGCTGTCGCCGGTGGAACCCA
AAACCACGCGTTTTGAGGCGGCAGCATATGGACAATACCTTTCAGGACAA
AACCATCGTGTGAGTGATCACCTACTTGCCTAGTTCAATCGGCTTCGGGG
TTTGCATACTTTTGTTTTATTTATTGAACCTACCCCGTCCGACCTCCCCA
CCCCATTTCTTCAGCCGCACTAACTCTCACGCCCGGATACTGAAACTCAA
TGCGTACACAAACACAGGGGTGGGTCTGTGCCAGTGGATCCCTTCGTCAT
TCCTTTATTGTCACAAGACAGCAGGAGCAATATCATTATCAGGAGCACCA
GCCATGGTCCTTCTTACCGGGTTCCTCAAAATGATGGGTACCGCCTCAGT
TGCCCTGACGGTAGGCACCACCAGTCAAACCGCTAGTCGAGGGCTTGCAT
CCTCTTTTTCGTCCACCACTATCACCCCTGCCCCCGCTGCTGTCACTGCA
GACCCGACTATCAACGCCGTGACCGCGACGGCAGTGGCGGCGGCCATTAC
GGGAGGACCAGGCGGGGAGGCCATGCGGATCAAGTCACCTTTGATCTATT
CCTTCTCTATGTCTAGCCTCGAAAATTCTCCCCCCATATACCTAAAGCTT
GACGTCTTACAACCTTCCGGCTCCTTTAAAGACCGAGGTATGGCTACGCT
CTGCGCCTCTCTGCAGCAGCAAGGTGCGCGTCGCCTTATTTCCTCCTCGG
GGGGGAACGCTGGCTTGAGCGCCGCATTGTGTGGGCGTATCTTGAATCTC
CCAGTGAGGGTGATTGTCCCCACGACGACCAAGCCTTTAATGCTGGAGAA
AATTAGGGCTCAAGGCGCGGAAGTGGAGGTATTTGGGAACAACTGGAATG
AGGCCGATGCCCGGGCACGGTGGCTGGTGGAGAAGGGAGGGAGGGAGGGG
GGGGAAGACGGGGAGGGAGGGCAGGCGGCGTACATTCCGCCGTACGACCA
CCCTCTCTTGTGGCAGGGACACAGTTCTCTGGTGGATGAGTTAGTGGAAA
GTGGAATCGAGAAACCGGCCGCCATCGTGGCGAGTGTGGGGGGAGGCGGG
TTGTTGTGTGGCATTTTTGAAGGACTCAGCAGGTATGAGAAGGGGGAGGA
CGGGAGGGAGGGCTGGGCGGACGTAGGGGTGGTAGGAGCAGAGACGGAGG
GCGCTGCGTCGTTTGCGGCCGGGATGGCGGCAGGGAAGGTGGTGAGGTTG
GAAGGGATTTCGTCTCTGGCTACCTCCCTGGGGGCCTTGGAGGTGACTCC
GCAGGCACTCGCATACGCGTTGAAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGAGAAGGAGGGGTGGGGAGTGGGGAGAGGGTAATCTTGAGCGAG
GTGGTTAGTGATAAGGACGCGGTACATGCTTGTAGGAGATTTCTGCAAGA
CCATCGGCTTTTGGTTGAGCCGGCGTGTGGCGCGGCGCTGGCGTTGGTGT
ATTCGAAGAGGGGCAGGGAGAGACTGAAGGCCCTGTCAGACGCCAAGGGG
GGAAAGCCGGTGGTGGTGGTGGTGTGTGGGGGCAGTGGGATCACGCCAGA
AATACTGGCAGAGATGGAGAGGAGCCTTGGGTTGGCGGCATGAGGAGGGA
GGGAGGGAGGGAGAGAGGGAGGGAGGGAAGGGATATACGATGTATAGAGA
AGGTCACAGAGATATTAGGAAGTGCGAAGAAATGAAGCTTATAGAAGAAA
GTGAGAAAGCCAAGGCATAGAAACATATATAATTTAATGAAATAGATCTA
TCCAAATGA back to topprotein sequence of NO14G00960.1 >NO14G00960.1-protein ID=NO14G00960.1-protein|Name=NO14G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MVLLTGFLKMMGTASVALTVGTTSQTASRGLASSFSSTTITPAPAAVTAD
PTINAVTATAVAAAITGGPGGEAMRIKSPLIYSFSMSSLENSPPIYLKLD
VLQPSGSFKDRGMATLCASLQQQGARRLISSSGGNAGLSAALCGRILNLP
VRVIVPTTTKPLMLEKIRAQGAEVEVFGNNWNEADARARWLVEKGGREGG
EDGEGGQAAYIPPYDHPLLWQGHSSLVDELVESGIEKPAAIVASVGGGGL
LCGIFEGLSRYEKGEDGREGWADVGVVGAETEGAASFAAGMAAGKVVRLE
GISSLATSLGALEVTPQALAYALKGGREGGREGGREGGVGSGERVILSEV
VSDKDAVHACRRFLQDHRLLVEPACGAALALVYSKRGRERLKALSDAKGG
KPVVVVVCGGSGITPEILAEMERSLGLAA* back to topmRNA from alignment at chr14:325435..327687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G00960.1 ID=NO14G00960.1|Name=NO14G00960.1|organism=Nannochloropsis oceanica|type=mRNA|length=2253bp|location=Sequence derived from alignment at chr14:325435..327687- (Nannochloropsis oceanica)
TCAGAGATCAGGAAGTCTCTGTCTTTGCGTGCGGGGTGTCGATGCGGAGG
AATGATTAAGAATGCGAGAGCAGGCTGGCTTCAAGGTCAACCACACACAG
AACAAAAGGAAGAAAGGATATACATGTGCCTTTCCCGCCATCATTTGCGA
TACCCGCGACGCTGTCCGTGCCAGAGTTGTGAGCCGCCACGACGCTGGGG
AGTAAAGTGGCTGCGGTACGCTTCGTGGATTGTCGGGGTTGATGCCTTGG
TGTCCTAGCAAATGTGCAGGAAAGGAAGAGCGAGAAGAAGTACTGCACTC
GCGTGATGATAGAGGGAGTCGTCGGTCGTCGCTGTCGCCGGTGGAACCCA
AAACCACGCGTTTTGAGGCGGCAGCATATGGACAATACCTTTCAGGACAA
AACCATCGTGTGAGTGATCACCTACTTGCCTAGTTCAATCGGCTTCGGGG
TTTGCATACTTTTGTTTTATTTATTGAACCTACCCCGTCCGACCTCCCCA
CCCCATTTCTTCAGCCGCACTAACTCTCACGCCCGGATACTGAAACTCAA
TGCGTACACAAACACAGGGGTGGGTCTGTGCCAGTGGATCCCTTCGTCAT
TCCTTTATTGTCACAAGACAGCAGGAGCAATATCATTATCAGGAGCACCA
GCCATGGTCCTTCTTACCGGGTTCCTCAAAATGATGGGTACCGCCTCAGT
TGCCCTGACGGTAGGCACCACCAGTCAAACCGCTAGTCGAGGGCTTGCAT
CCTCTTTTTCGTCCACCACTATCACCCCTGCCCCCGCTGCTGTCACTGCA
GACCCGACTATCAACGCCGTGACCGCGACGGCAGTGGCGGCGGCCATTAC
GGGAGGACCAGGCGGGGAGGCCATGCGGATCAAGTCACCTTTGATCTATT
CCTTCTCTATGTCTAGCCTCGAAAATGTACGTCCCTTATACACATTGAGG
CATCCACACATCATCTGTCCATCCTGTATTTCGTCTTGTGATTTCTCCAT
CCCGATCTCTTTCCAACGCACTCACTTCCCCCTCCCTCCCTCCCTCCCTC
CCCCCCTCCCTCCCTCGCAGTCTCCCCCCATATACCTAAAGCTTGACGTC
TTACAACCTTCCGGCTCCTTTAAAGACCGAGGTATGGCTACGCTCTGCGC
CTCTCTGCAGCAGCAAGGTGCGCGTCGCCTTATTTCCTCCTCGGGGGGGA
ACGCTGGCTTGAGCGCCGCATTGTGTGGGCGTATCTTGAATCTCCCAGTG
AGGGTGATTGTCCCCACGACGACCAAGCCTTTAATGCTGGAGAAAATTAG
GGCTCAAGGCGCGGAAGTGGAGGTATTTGGGAACAACTGGAATGAGGCCG
ATGCCCGGGCACGGTGGCTGGTGGAGAAGGGAGGGAGGGAGGGGGGGGAA
GACGGGGAGGGAGGGCAGGCGGCGTACATTCCGCCGTACGACCACCCTCT
CTTGTGGCAGGGACACAGTTCTCTGGTGGATGAGTTAGTGGAAAGTGGAA
TCGAGAAACCGGCCGCCATCGTGGCGAGTGTGGGGGGAGGCGGGTTGTTG
TGTGGCATTTTTGAAGGACTCAGCAGGTATGAGAAGGGGGAGGACGGGAG
GGAGGGCTGGGCGGACGTAGGGGTGGTAGGAGCAGAGACGGAGGGCGCTG
CGTCGTTTGCGGCCGGGATGGCGGCAGGGAAGGTGGTGAGGTTGGAAGGG
ATTTCGTCTCTGGCTACCTCCCTGGGGGCCTTGGAGGTGACTCCGCAGGC
ACTCGCATACGCGTTGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GAGAAGGAGGGGTGGGGAGTGGGGAGAGGGTAATCTTGAGCGAGGTGGTT
AGTGATAAGGACGCGGTACATGCTTGTAGGAGATTTCTGCAAGACCATCG
GCTTTTGGTTGAGCCGGCGTGTGGCGCGGCGCTGGCGTTGGTGTATTCGA
AGAGGGGCAGGGAGAGACTGAAGGCCCTGTCAGACGCCAAGGGGGGAAAG
CCGGTGGTGGTGGTGGTGTGTGGGGGCAGTGGGATCACGCCAGAAATACT
GGCAGAGATGGAGAGGAGCCTTGGGTTGGCGGCATGAGGAGGGAGGGAGG
GAGGGAGAGAGGGAGGGAGGGAAGGGATATACGATGTATAGAGAAGGTCA
CAGAGATATTAGGAAGTGCGAAGAAATGAAGCTTATAGAAGAAAGTGAGA
AAGCCAAGGCATAGAAACATATATAATTTAATGAAATAGATCTATCCAAA
TGA back to topCoding sequence (CDS) from alignment at chr14:325435..327687- >NO14G00960.1 ID=NO14G00960.1|Name=NO14G00960.1|organism=Nannochloropsis oceanica|type=CDS|length=1290bp|location=Sequence derived from alignment at chr14:325435..327687- (Nannochloropsis oceanica)
ATGGTCCTTCTTACCGGGTTCCTCAAAATGATGGGTACCGCCTCAGTTGC
CCTGACGGTAGGCACCACCAGTCAAACCGCTAGTCGAGGGCTTGCATCCT
CTTTTTCGTCCACCACTATCACCCCTGCCCCCGCTGCTGTCACTGCAGAC
CCGACTATCAACGCCGTGACCGCGACGGCAGTGGCGGCGGCCATTACGGG
AGGACCAGGCGGGGAGGCCATGCGGATCAAGTCACCTTTGATCTATTCCT
TCTCTATGTCTAGCCTCGAAAATTCTCCCCCCATATACCTAAAGCTTGAC
GTCTTACAACCTTCCGGCTCCTTTAAAGACCGAGGTATGGCTACGCTCTG
CGCCTCTCTGCAGCAGCAAGGTGCGCGTCGCCTTATTTCCTCCTCGGGGG
GGAACGCTGGCTTGAGCGCCGCATTGTGTGGGCGTATCTTGAATCTCCCA
GTGAGGGTGATTGTCCCCACGACGACCAAGCCTTTAATGCTGGAGAAAAT
TAGGGCTCAAGGCGCGGAAGTGGAGGTATTTGGGAACAACTGGAATGAGG
CCGATGCCCGGGCACGGTGGCTGGTGGAGAAGGGAGGGAGGGAGGGGGGG
GAAGACGGGGAGGGAGGGCAGGCGGCGTACATTCCGCCGTACGACCACCC
TCTCTTGTGGCAGGGACACAGTTCTCTGGTGGATGAGTTAGTGGAAAGTG
GAATCGAGAAACCGGCCGCCATCGTGGCGAGTGTGGGGGGAGGCGGGTTG
TTGTGTGGCATTTTTGAAGGACTCAGCAGGTATGAGAAGGGGGAGGACGG
GAGGGAGGGCTGGGCGGACGTAGGGGTGGTAGGAGCAGAGACGGAGGGCG
CTGCGTCGTTTGCGGCCGGGATGGCGGCAGGGAAGGTGGTGAGGTTGGAA
GGGATTTCGTCTCTGGCTACCTCCCTGGGGGCCTTGGAGGTGACTCCGCA
GGCACTCGCATACGCGTTGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGAGAAGGAGGGGTGGGGAGTGGGGAGAGGGTAATCTTGAGCGAGGTG
GTTAGTGATAAGGACGCGGTACATGCTTGTAGGAGATTTCTGCAAGACCA
TCGGCTTTTGGTTGAGCCGGCGTGTGGCGCGGCGCTGGCGTTGGTGTATT
CGAAGAGGGGCAGGGAGAGACTGAAGGCCCTGTCAGACGCCAAGGGGGGA
AAGCCGGTGGTGGTGGTGGTGTGTGGGGGCAGTGGGATCACGCCAGAAAT
ACTGGCAGAGATGGAGAGGAGCCTTGGGTTGGCGGCATGA back to top
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