NO14G00540, NO14G00540 (gene) Nannochloropsis oceanica

Overview
NameNO14G00540
Unique NameNO14G00540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4484
Alignment locationchr14:213398..217881 -

Link to JBrowse

Properties
Property NameValue
Descriptionferric reduction oxidase 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:213398..217881 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR017927Fd_Rdtase_FAD-bd
IPR013121Fe_red_NAD-bd_6
IPR013112FAD-bd_8
IPR013130Fe3_Rdtase_TM_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO14G00540 vs. NCBI_GenBank
Match: OQR85564.1 (transmembrane protein [Achlya hypogyna])

HSP 1 Score: 136.0 bits (341), Expect = 7.800e-28
Identity = 143/530 (26.98%), Postives = 225/530 (42.45%), Query Frame = 0
Query:  345 MALSWKVDPNLDYVELQLEGAGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLVEINASTYGVIPLLSQGAGGKLFMRYHQSINKA---NVPVDLSE-RSTFMWAWAEGPYPEMHNSFGSVILNWR----DGTCEPPLIL------PELEGYWL-----LFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRY-GEFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGL---LIEINPV-WGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHY-LFIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLH----VKGLGDGTWTDRIYRLA 844
            +AL  +VD       L   G G  WIS GL S  + MV+ P +  +++D          L+GY   N+V  +A +  +  L S      L + Y  + N     +V +DL    +  +WA+ +G +P  H+  G+  ++ R    DG+    L L      P    Y L     LFF  L V+        TR+     TL      P++  PA L  +T      + +   G+  +  L+ +L  L +      + G    ++  +  G  ++ +L    LP ++   W Y+FG+   R V FH+ L  L LA  +LH  L    I+ N +   +P   + V+ AYGL+A I F IM ++A   +R+W +ELF   H   F  G VL  LH       +  P  ++ A        VLR  + A    F  H+               +      +Q ++W   + P +Y +VCIP IS  +WHP             SAI   ++ H    VK  G GT+TD++ +LA
Sbjct:   37 LALQVRVDNASACFRLTYTGTGADWISLGL-STSQYMVNNPPNNAVVFDAKRNLAKVHVLKGYNDDNVVASSAPS-SITILSSSVVDDVLAVTYEHAFNAVSANDVAIDLENGNNVLLWAYGKG-FPSYHDDQGAQSISIRVPTDDGSAPDNLDLSATKSSPAAPTYRLVLGAILFFAVLGVV-------TTRLSATSATLGT----PLVAPPAHLTSITDSFQVAIADLNLGQAFVVALYMMLVGLTLGLLVPHFSGLPPVRAASVVCGHLSVLHLAFLLLPASRGGHWGYLFGVPHTRLVTFHKWLGVLFLATLLLHFALNLATIQWNVLRSSMPFGADKVIPAYGLYAGIIFGIMGLSAAPPVRKWCYELFYVIHRGGFFVGIVLVCLHAKAIWLALAAPLGLYVATLV-----VLR--TRAFWQRFQGHV-------MTTTSSTVLFELQASKQTKRWLDNLAPCAYFYVCIPSISRTEWHPF------------SAIVSPHTGHLAFCVKSRGPGTFTDQLVQLA 526          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_012210049.1 (hypothetical protein SPRG_15118, partial [Saprolegnia parasitica CBS 223.65] >KDO19244.1 hypothetical protein SPRG_15118, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 135.2 bits (339), Expect = 1.300e-27
Identity = 132/509 (25.93%), Postives = 216/509 (42.44%), Query Frame = 0
Query:  358 VELQLEGAGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLVEINASTYGVIPL----LSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGSVILNWRD---GTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIP----AWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLW-TYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIE-INPVWGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHYLFIA-GTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTV 851
            ++L L  A   W+ G  ++ +  MV+ P +  +++D+T  +P   +L GY P +++ + A+T     L    ++ G     F R   +    +V +         WA+    +P  H+  GS +L ++     +   P  +     Y +L       LV W               L+R L      P      + +     +  L + K GE +  VL + L  L +V  A+     S ++  +  G  A+ +LML  LPV +   W   +FG SFER +KFHR L  L + ++  HL L  + I+ +  +     GVV  YG  A + F ++ + A+  +RR HFELF Y H +  A G VL  LH       + +P  ++   + WR    LR        +   H A+  V   +P  P          Q + W + +  G+Y +V IP IS  QWHP S     M+ +  S   P+    +K   DG++ D +Y        TV
Sbjct:  385 IQLVLSDAKATWL-GLSLAPNAQMVNNPVNNAVVFDFTQPTPSLFALTGYEPDDILPL-ATTAASFDLYSASIANGTAQFTFQRRLAASIATDVAIAPDADVIVNWAYGHDAWPSYHHDRGSSLLTFQSLQLTSSASPSAVSTSTLYIVL------TLVVWLVFLGLVATHVFAYPLRRWLNATFVAPPRFQRTVSFFQTWFLQPLSDLKVGEAI--VLLHYLGCLGLVAAAVAASFDSSRAWSLVSGHLALVHLMLLLLPVARGLHWEVLVFGSSFERVLKFHRVLGRLFVVFAAWHLYLNAQRISVLSVVSYGSQGVVPLYGFGAFVCFAVLGLFAVPFVRRNHFELFYYVHRVAAACGIVLACLHARTVWLSLVLPLTLYVGSYLWR----LRSHWNRFRVVLSSH-AEKTVTIVLPSTP----------QTQVWARAMPLGAYFWVAIPSISWLQWHPFS----AMATIDASG-APTIGFVIKATTDGSFVDAVYTSLVGLETTV 863          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: OQR97487.1 (transmembrane protein [Achlya hypogyna])

HSP 1 Score: 133.7 bits (335), Expect = 3.900e-27
Identity = 146/649 (22.50%), Postives = 238/649 (36.67%), Query Frame = 0
Query:  369 WISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLVE--INASTYGVIPLLSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFG--SVILNWRDGTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSM-GIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGL-LIEINPVWGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHHQLPLLESVILVWAVR 1009
            WIS G  +  K MV+ P    ++++ +       +L GY    +      +S +     L  G     F R   + +  ++ +        +WA ++  +P +H+  G   V+L    G  +   +   +   +       A  VT   L           +L  +    M  P   + +  G +  L + K GE+ + +++      + V   L++   S   +  +  G  A+TNLML  LPV +   W  +FGIS ER +KFHR L  L + +++LHL L  I++N           VV  YG  + IAF  M + AL  +RR  +ELF Y H +  + G V  +LH       M  P  ++                V +L  F  H A      +V G     L   +  Q ++W   + P ++ +VC+P +S  +WHP S           +  + S    +K    G++ D +Y+ A+  S                                                                                                  LT+LV GPYGKL++D+  Y  +V+VAGG+GITPM +    + +Q R  Q        L W VR
Sbjct:   65 WISIGFAAEAK-MVNSPVTNAVVFEVSTSRLQLYTLGGYSASRITRQADQSSLFVAQAGLVNGVASFTFARPLVAPSATDITLVNGAAVNILWALSDNAWPSIHSERGVSRVVLTSAAGPAQVLALESSIVTTYTTAI-VAAAFVTLVALGLVTTHTGDFRILHHK---AMLAPPAPNHLFLGFLQSLADVKLGEVGVGIVYVAALIGVGVSIHLQFENESLNRLASVTTGHLALTNLMLLLLPVARGKHWELVFGISHERILKFHRALGRLCVVFTVLHLILNAIDVNVTTSTAYGTQQVVPLYGFVSFIAFASMGLLALEPVRRRWYELFYYYHRVAAVVGIVFAMLHSRTVAYAMIFPVAIYGLS------------GVFRLRAFCTHFA---TTVEVQGESSVTLILPSTAQTKRWAATMNPCAFFWVCVPSVSATEWHPFSAIV--------TPDQDSIGFCIKSRARGSFVDGVYQAASEAST-------------------------------------------------------------------------------------------------LTVLVGGPYGKLTVDIHKYDHVVMVAGGVGITPMLS----LMNQTRDKQALTKTKFALHWVVR 584          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_008615863.1 (hypothetical protein SDRG_11598, partial [Saprolegnia diclina VS20] >EQC30839.1 hypothetical protein SDRG_11598, partial [Saprolegnia diclina VS20])

HSP 1 Score: 129.8 bits (325), Expect = 5.600e-26
Identity = 150/643 (23.33%), Postives = 249/643 (38.72%), Query Frame = 0
Query:  365 AGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPI--FISLEGYLPKNLV-EINASTYGVIPL-LSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGS--VILNWRDGTCEPPLIL--------PELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSMGIAF----GKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEINPVWGLPP-KLNGVVMAYGLWALIAFLIMTVTA---LLRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLS 985
            A   W+S GL S  + MVS P    ++ +  +G+P      L GY   ++V + + S+  V+   ++ G     F R   S +  +V +  +  +  +WA     +P  H++ G+  ++L+   G  +    +         ++          L ++ T+T           + + Q+ L      P     +  G+   L + K GEL++  ++  + TL+ V  ++R  +F+  S+G A     G  A+ ++ML  LPV +   W  +FGIS ER +KFHR L    + Y+ LHL L    + V         GV   YG  A +AF  M + A   + RRW +E F Y H +  +AG VL +LH    +  M  P +++         G LR       + F    A +DV    P     +L S T  + + W   + P ++ +VC+P IS  +WHP S           S  + S    +K L  G++ D++   AA  +                                                                                                  LT+LV GPYGK ++DL  Y  +V+V GGIG+TPM + ++
Sbjct:   59 ANARWVSIGLASSSR-MVSSPVSNAVVMEIGSGAPTVRLYELRGYSAASIVLQADQSSLSVVRSGVTNGVATFTFQRPLTSPSALDVALADNSAANLLWAHGASAFPSYHDAAGATRIVLSSSTGPAQVLATMSTVVTSYTAQIVAAGFATMVLLGLVATYT--------GEWRAINQKTL----CAPPTSRHLFAGLQQSLADLKLGELVVLAVY--VATLIAVGLSVR-AQFADASLGRALALISGHLALVDMMLLLLPVARGKHWEVVFGISHERILKFHRALGRSCVVYATLHLVLTANASGVTNANVYGTQGVTPLYGFLAFLAFASMGLIAFEPIRRRW-YEAFLYFHRVAALAGIVLAMLHSTAVVYGMIFPLVIYGLSAL----GRLR-------AFFNRFEATVDV--SAPDTVTLVLPSTT--KTKHWAASMNPCAFFYVCVPSISATEWHPFSAIV--------SPDQDSIGFCMKALQKGSFVDKVCHAAADATT-------------------------------------------------------------------------------------------------LTVLVGGPYGKPAVDLDRYDHVVMVCGGIGVTPMLSVMN 564          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: OQR90986.1 (transmembrane protein [Thraustotheca clavata])

HSP 1 Score: 127.5 bits (319), Expect = 2.800e-25
Identity = 120/464 (25.86%), Postives = 194/464 (41.81%), Query Frame = 0
Query:  365 AGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLV-EINASTYGVIPLLS-QGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGSVILNWRDGTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIM-HIPAW--------------LDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYG-EFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEI--NPVWGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTH-YLFIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPIS 806
            A   W++  + S  K MV+ P    +LYD TA +P    ++ Y     V   N ST  +    S  GA    FMR ++ +  ++V +     +T  WA+    +P MH   GS  +  +  +      LP               ++T+     T V      LL   LG I+ H+  W                W + G+   L + K GE ++ +++ +    +     L++      +S  +  G   + NLML  LPV +   W   FGIS ER +KFHR L  + +    +HL L +    + ++  P      V  YG  A IAF  M + A   +RR  +E+F Y H +  I G V  +LH P     M  P  V+  +  WR+            S+F  H   L   S       +I++  + ++ +KW + + P ++ FV +P +S  +WHP S
Sbjct:  542 ASASWMAISIASSSK-MVTNPIGNTVLYDNTAKAPQLYEIQTYKKDGTVLAKNQSTLTIKAASSTNGALAFTFMRSNKVMIASDVAIMPDAYNTINWAYGSSKWPSMHEGRGSANVVIKTFSASTNGSLP--NXXXXXXXXXXQRIITY-----TEVITAAAFLLIIILGLIVTHVGQWHILNHSTVCLPPKKNSWYS-GIQQSLADIKLGECIVFIIYLIALCAVSFSVHLKFSTALPLQSFVLVSGHLGLVNLMLILLPVARGRHWELFFGISHERILKFHRALGRVFILLVTIHLVLCLYKGGSVLYNKPYGTQQAVPLYGFIAFIAFASMGLMAFGPIRRKCYEVFYYYHRFTAIVGIVFAVLHAPSIFIAMVFPVAVYVINSLWRFG-----------SLFNSHHGTLTTHSD----GTTIITLASTQKTQKWAQTMNPCAFFFVNVPCVSRVEWHPFS 981          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_008603744.1 (hypothetical protein SDRG_00060 [Saprolegnia diclina VS20] >EQC42321.1 hypothetical protein SDRG_00060 [Saprolegnia diclina VS20])

HSP 1 Score: 126.3 bits (316), Expect = 6.200e-25
Identity = 125/504 (24.80%), Postives = 217/504 (43.06%), Query Frame = 0
Query:  358 VELQLEGAGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLVEI----NASTYGVIPL-LSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGSVILNWRD---GTCEPPLILPELEGY-------WLLFFPFLAVLV-TWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLW-TYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEINPVWGLPP-KLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIY 841
            ++L L      W+ G  ++    MV+ P +  +++D++  +P   +L GY P++++ +    +AS++ +    ++ G     F R   +    +V +  +  +   WA+    +P  H   GS +L ++     +   P  +     Y       WL+F   +A  V  +   R            QR +G ++H   WL       +  L + K GE +  VL + +  L +V  A+       +   +  G  A+ +LML  LPV +   W   +FG SFER +KFHR L  L + ++  HL L  +   V  +      GVV  +G  A ++F ++ + A+  +RR HFELF Y H +  + G V   LH       + +P  ++   + WR    LR        +   H  +  V   +P  P          Q + W + +  G+Y +V IP IS  QWHP S     M+ +  S   P+    +K   DG++ D +Y
Sbjct:  385 IQLVLSDVKATWL-GLSLAPKAQMVNDPVNNAVVFDFSKPTPALFALTGYEPEDILPLAATSDASSFVLYSASVANGTAQFTFQRRLDAATATDVAIAPNADAIVNWAYGHDAWPSYHQDRGSSLLTFQSLQLTSAASPSAVSTSTLYIVLGLIVWLVFVGLVATHVFAYPLRRWLNTTFVAPPRFQRSVG-LLH--TWL-------LQPLSDLKVGEAI--VLLHYVGCLGLVGAAVAASFEPSRVWSLVSGHLALVHLMLLLLPVARGVHWEVLVFGSSFERVLKFHRVLGRLFVVFAAWHLYLNAQRISVLSMTSYGSQGVVPFFGFSAFLSFALLGLFAVPYVRRNHFELFYYVHRVAAVGGLVFACLHARTVWLSLILPLTLYVGSYLWR----LRSHWNRFRVVLSSH-TEKTVTIVLPSTP----------QTKAWARDMPLGAYFWVAIPAISWLQWHPFS----AMATVDASG-APTIGFVIKATTDGSFVDDVY 855          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_012193549.1 (hypothetical protein SPRG_00043 [Saprolegnia parasitica CBS 223.65] >KDO35197.1 hypothetical protein SPRG_00043 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 125.6 bits (314), Expect = 1.100e-24
Identity = 153/662 (23.11%), Postives = 256/662 (38.67%), Query Frame = 0
Query:  365 AGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPI--FISLEGYLPKNLV-EINASTYGVI-PLLSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGS--VILNWRDGTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSMGIAF----GKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEINPVWGLPP-KLNGVVMAYGLWALIAFLIMTVTA---LLRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHHQLPLLESVILVWAVRNKT 1012
            A   W+S GL +  + MVS P    ++ +  +G+P      L GY   + V + + S+  V+   ++ G     F R   S +  +V +  +  +  +WA     +P  H++ G+  V+L+   G  +    +  +   +      +A       L        G+  +  +    +  P     +  G    L + K GEL++ V++  + TL+ V  ++R  +F+  ++G A     G  A+ ++ML  LPV +   W  +FGIS ER +KFHR L    + Y+ LHL L    + V          V   YG  A +AF  M + A   + RRW +E F Y H +  +AG VL +LH    +  M  P +++         G LR       + F    A +DV    P     +L S    Q ++W + + P ++ +VC+P IS  +WHP S           S  + S    +K    G++ D++  LAA+ + T                                                                                                +T+LV GPYGK ++DL  Y  +V+V GGIG+TPM + ++    +    +   LE   + W VR  T
Sbjct:   59 ANARWVSIGLATSSR-MVSSPISNAVVMEIGSGAPTVRLYELRGYTAASAVLQADQSSISVVRSAVTNGIASFTFQRPLVSPSPLDVGLADNSAANVIWAHGASAFPSYHDAAGATRVVLSSSTGPAQVLAAISTVVSSYTA--QIVAAGFATMVLLGLVATHAGEWRVVNQ--KTLCAPPTSRHLLAGFQQSLADLKLGELVVLVVY--VATLIAVGLSVR-AQFADATLGRALSLITGHLALVDMMLLLLPVARGKHWELVFGISHERILKFHRGLGRSCIVYATLHLILTAGTSGVTSANAFGTQRVTPLYGFLAFLAFASMGLVAFEPIRRRW-YEAFLYFHRVAAVAGIVLAMLHSKAVVYGMIFPLVIYGLSAL----GRLR-------AFFNRFEAHVDV--SAPDTVTLLLPSTP--QTKRWAETMNPCAFFYVCVPSISATEWHPFSAIV--------SPDQDSIGFCIKAPKKGSFVDKVC-LAATDATT------------------------------------------------------------------------------------------------MTVLVGGPYGKPAVDLGRYDHVVMVCGGIGVTPMLSVVNQCRDKGGESRRANLE---MHWVVRAPT 588          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_012193553.1 (hypothetical protein SPRG_00047 [Saprolegnia parasitica CBS 223.65] >KDO35201.1 hypothetical protein SPRG_00047 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 123.2 bits (308), Expect = 5.200e-24
Identity = 151/659 (22.91%), Postives = 248/659 (37.63%), Query Frame = 0
Query:  369 WISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGYLPKNLVEINASTYGVIPLLSQGAGGKLFMRYHQSINKANVPVDLSE--RSTFMWAWAEGPYPEMHNSFGSVILNWRDGTCEPPLI--------LPELEGYWLLFFPFLAV-LVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRY---GEFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGL-LIEINPVWGLPPKLNGVVMAYGLWALIAFLIMTVTA---LLRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHHQLPLLESVILVWAVR 1009
            W+S G  +  K MV+ P    +++   + S    +L  Y     + + A    +    +    G     + +++  ++  V L++   +T +WA+    +P  H + G+  L    G     +                   F   LA+ L+      N RV    KTLL          P         V+  L + K GE L+  ++  + TL I+  ++ +   G  + ++  +  G  A+ +LML  LPV +   W   FGI+ +R +KFHR L  + +   + HL L  ++ N            V  YG  A +AF  M + A   + RRW +E F Y H +  +AG VL +LH    +  M  P +++         G LR    A  + F  H+ + D       G  ++L   T  Q ++W + + P S+ +VCIP IS  +WHP S           S  + S    +K    G++ D++ R AA                                                                                      TSP            L++LV GPYGKLS+D++ Y ++V+V GG+G+TPM + ++     KRH         +L W VR
Sbjct:   62 WVSIGFAASSK-MVNSPVTNAVVFKSASTSVQLYALGDYSASG-ITLQADQSAIRVAQAASVNGVATFTFSRALAGSSADVALTDGGETTVLWAYGTSAWPAYHAARGATRLVLSSGVGPAQVFAAXXXXXXXXXXXXXXXXFVTLLAMGLIATHAGDNWRVIH-HKTLL---------APPGSSHAAGAVLQPLADVKVGEWLVVAVY--IATLAIIGASVNHQFVGASATRAASLTTGHLALAHLMLLLLPVARGKHWELAFGIAPDRILKFHRALGRVGVLLMLAHLLLNAVDRNVTTATAVGTQEAVPLYGFLAFLAFASMGLVAFEPIRRRW-YEAFLYFHRVAAVAGIVLAMLHSMAVVYGMIFPLVIYGLSAL----GRLR----AFFNRFEAHV-EADAH-----GTVTLLLPST-PQTKRWAETMNPCSFFYVCIPSISATEWHPFSAIV--------SPKQDSIGFCIKAPKKGSFGDKVCRAAA--------------------------------------------------------------------------------------TSP-----------ALSVLVGGPYGKLSVDIAKYDRVVMVCGGVGVTPMLSVVNQSRDDKRHRD----GKFVLHWVVR 581          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_008620898.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC25679.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 122.9 bits (307), Expect = 6.800e-24
Identity = 151/674 (22.40%), Postives = 251/674 (37.24%), Query Frame = 0
Query:  365 AGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPIFISLEGY------LPKNLVEINASTYGVIPLLSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGS--VILNWRDGTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIM-HIPAW------------LDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRY---GEFSFKSMGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEI--NPVWGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHYL-FIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHHQLPL-LESVILVWAVR 1009
            A   W S  + S  K MV+ P   V++YD  A +P    +  Y      L K+   +N  +   +     GA    F+R +     ++V V     +   WA+    +P MH   GS  V++     +      LP ++              +   +  T V      ++   LG I+ H+  W                  G    L + K GE ++ +++ L  TL +V +++          +S+ +  G   + NLML  LPV +   W  +FGIS ER +KFH+ L    +    LH  L +    +  +  P      +  YG  + IAF  M + A   LRR ++E+F + H    + G V  +LH P  L  M  P +V+  +  WR+            + F  H A L+  S       ++++  +  +  K+ + +   ++ ++ IP +S  QWHP S     ++   GS+I       VK L  G++ D ++ + A  +L V P                                                                                          +  + + V+GPYGK S+ L  Y  +VLVAGGIG+TPM      I +Q RH +L    + ++  W VR
Sbjct:   59 ASVAWASIAIASSPK-MVTSPIGNVVIYDANAPAPQLYEMLSYKKAGTVLAKDQSPLNVVSASAV----NGALTYTFLRPNAVKIASDVAVLPDAYNIINWAYGTAQWPSMHQGRGSANVVVKSVTASNAGGNSLPTIDN----------ASASLRVITYTDVITAVAFMVMLLLGVIVTHVGRWHILNHSSVCAPPTSGYCMGFRTTLADLKLGECIVLIVYLL--TLCVVSFSVHVKFANALPGQSLVLVTGHLGLVNLMLILLPVARGQHWEIVFGISHERILKFHKGLGRSFVLLCALHFALSLNQGGSATYAEPYGTQEAIPLYGFVSFIAFASMGLLAFEKLRRQYYEVFYWHHRASAVVGLVFAVLHAPAILIAMLFPLVVYVLNSLWRF-----------AAYFASHAATLETHSD----GTTVITLASTLKTAKYAQTMNTCAFFYLNIPTLSGVQWHPFS----AIATPDGSSI----GFCVKALSKGSFVDAVH-VRARGALEVDP-----------------------------------------------------------------------------------------ALAHIRVRVEGPYGKASVLLHQYDVVVLVAGGIGVTPMLN----IINQDRHKRLSKPTQRLVFHWIVR 598          
BLAST of NO14G00540 vs. NCBI_GenBank
Match: XP_008873250.1 (hypothetical protein H310_09066 [Aphanomyces invadans] >ETV98375.1 hypothetical protein H310_09066 [Aphanomyces invadans])

HSP 1 Score: 122.9 bits (307), Expect = 6.800e-24
Identity = 131/631 (20.76%), Postives = 240/631 (38.03%), Query Frame = 0
Query:  381 MVSRPRHKVLLYDYTAGSPIFISLEGYLPKN-LVEINASTYGVIPL-LSQGAGGKLFMRYHQSINKANVPVDLSERSTFMWAWAEGPYPEMHNSFGSVILNWRD-------GTCEPPLILPELEGYWLLFFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIPDLCNFKYGELLITVLFYLLQTLLIVYWALRYGEF-SFKSMGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGL---LIEINPVWGLPPKLNGVVMAYGLWALIAFLIMTVTAL--LRRWHFELFRYTHYLF-IAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQWHPIS--ISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTVTPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILVDGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHH 994
            M++ P +  +++  T G+     L    P + L + N S+  VI   +  G    +F R   +    +V +  +E +   WA     +P+ H+  GS  + +          +   P ++P    +W+    F+ +      + ++          QR   P    P+    +    +  L +  +GEL++ +++ L   ++ +   +++    + +++ +  G  ++ +L    LPV + + W ++FG S +R +K HR L  L +  + LHL +   LI     +G       VV  +G  A ++F  M + +   +RR +FE+F Y H +  I G V  +LH       M +P  ++AA F WR  G L   S    S            S VP     IL      Q ++W   + P S+ +V IP +S  QWHP S  ++  G S+          +  +K L  G++ D++   A +                                                                                          L+S       + + V GPYGK S+D + Y +++L+AGGIG+TP  + ++ + H    H
Sbjct:  161 MINTPANNAIVFHTTNGTAALYDLLDSAPDSVLYQPNQSSLRVIEASVVSGTVLVVFQRPLAATVPTDVAISTTEANIVNWAVGTTTWPDYHDIQGSATIRFSSISAVTTPASPAAPALVPTYT-FWIAAATFILIASLGVVVTHSVGSSFRWAKHQRLTAP----PSGAASIWSAFVRTLADITFGELVVVIIYLLAFVVVGISVRIQFPTVAAARAVALISGHTSLLSLTFMLLPVARGAHWEWLFGASHDRLIKLHRWLGRLFVLTATLHLAMNVPLITFAHSFG----TQAVVPLFGFVAYVSFASMALLSYESIRRHYFEVFYYYHRIMSIVGLVFVVLHTEAVRTAMMLPLALYAATFVWRLRGYLNKYSARIQS------------SHVPN--TVILVLPVTPQTKRWAATMNPCSFFWVNIPSVSVLQWHPFSAVVTPDGESI----------AFCMKSLAAGSFADQVVAQAKAN-----------------------------------------------------------------------------------------LVS-------MAVFVGGPYGKPSVDFTKYDEVILIAGGIGVTPFVSLVNQLPHTLPAH 662          
The following BLAST results are available for this feature:
BLAST of NO14G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR85564.17.800e-2826.98transmembrane protein [Achlya hypogyna][more]
XP_012210049.11.300e-2725.93hypothetical protein SPRG_15118, partial [Saproleg... [more]
OQR97487.13.900e-2722.50transmembrane protein [Achlya hypogyna][more]
XP_008615863.15.600e-2623.33hypothetical protein SDRG_11598, partial [Saproleg... [more]
OQR90986.12.800e-2525.86transmembrane protein [Thraustotheca clavata][more]
XP_008603744.16.200e-2524.80hypothetical protein SDRG_00060 [Saprolegnia dicli... [more]
XP_012193549.11.100e-2423.11hypothetical protein SPRG_00043 [Saprolegnia paras... [more]
XP_012193553.15.200e-2422.91hypothetical protein SPRG_00047 [Saprolegnia paras... [more]
XP_008620898.16.800e-2422.40hypothetical protein, variant [Saprolegnia diclina... [more]
XP_008873250.16.800e-2420.76hypothetical protein H310_09066 [Aphanomyces invad... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002251NSK002251Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00540.1NO14G00540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555410gene_5620Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00540.1NO14G00540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00540 ID=NO14G00540|Name=NO14G00540|organism=Nannochloropsis oceanica|type=gene|length=4484bp
ATCCTCCCTATCTGCACTCAATCATTGCGGCATAGTACGCTCTGATCTAG
CGCGTATTTATCTTAATTTTCTTGTATCCTTGTCATGAATATAATTATCT
TTGCGATGTATGTGCAACGGATGTTCTCACTGCTGCTGAATCACAAAAAC
ATGTATTCACTTTTCCCGCACCCACCCACCCACATACGGGACGGGTCCTC
CTCAAGCCCGGTGTCCTTCCTTATTGTGTGCAGGTACGGATCATTAAGAA
CCCATGGGTTATTGTTCTGGCCGCGCTAAGCTGGATGATTCCATTTTCAC
ATCCATTGCCTGCCTCGCCGTCTTTGTTTTGGGCCTGGGCTGGGCGCCTG
TGACCCACGGCTGGGCAAGCAGCATGATCGAAGCGGACCTCTGTTCGACT
CCCATGgtacgtaccctatttctcttacctgcatattccatgtgtgacga
atacgccttatgccatcatcgctcgagatttctttctctgcgtcctctgg
tgcacccagacccgagagcactcatgcgcacacaaactgtttgaatatct
ggacaattttatacgcgtaccttctgtaatacaaactcgaacatccattc
agACTATTGGCACAATTATATTGAATATACCTGCCTACCCCATTGCTGCC
AACGTGTCGATCGGCGTGTACCGCGACGGAGTCTTGCTGAGCCCCCTCGA
CATGACCTACTTCCCTAATGAGACCTTGTCCCTCACGCTGGTGAGCACTC
TGGGCGAGTTTACGTGGGAGACTGGCGGAGGCGCGTATTTTATTGGAAAT
GATACAGGCTGCCCGGGAAATGTCCGCTCGGCAAATGAGGCCCCCACAAT
AGTCATGCCCGCGGACGACGTGAGCGAGGTCACCATCTGGGGTGGTCATC
ATGCTGCTGGGGAGCTGGGTGTGGGCATCATGCGCACTGTCACCCTCCTA
CCCAAGGTCGAAGCTGGTATTGCCCTGCCCATAGTGGAGAAGCCTAAACC
TTCCGAGCATGCTGCCTATTTCACGGCTACCATGGTGGGTCTCACTGCCA
CGGCTTTCCAAGCACCAGCCGCCAGGATGCTGCTCGCTGGGACGCTGGGA
ATGACCTATAGCCAAGTCTACCTGATAGTCTCACCTGCTGGCCCAACCGC
TGCAGGCTTAGGCTTCCACATTCTTAGATCAGACGACGGGCAAGACGGAC
AAAATGGTCGTAGCTTGCAGTCGGCGCCGATTCCTGTCGCCACGGATCTG
GTCTTGCGCCTCACCAACTTGGGGAGCGAGGCAGAGGCTAATTCTTTGCT
CACTCCCGTGGGCAATTACTTGTCCTCCCCGCTAGCTAATGGCTTTGCTG
CACAGTACCGCAACGTCACGGATACTCCCACCACTGCCCCTGCCACCTAT
CTTGTCTTGCGGCAGAGCGGGGCCACCACGTTTAGCGTACCAGCTCTGCA
GGCGTCTTGCATTTTGGATGTAGCGAGGAGCATGGCACTTTCCTGGAAAG
TAGATCCAAACCTAGATTATGTCGAGTTGCAGCTGGAAGGGGCTGGGCAA
GGCTGGATATCAGGAGGGCTGGTATCGGTGGATAAGCTTATGGTTTCGAG
GCCCAGGCATAAAGTCCTTCTTTATGACTATACTGCGGGGAGCCCTATTT
TTATCTCCCTTGAGGGATACCTGCCCAAGAATTTGGTGGAGATCAACGCC
TCGACCTATGGTGTAATCCCTCTCCTTTCACAAGGCGCCGGTGGTAAGCT
CTTCATGCGCTATCATCAGTCCATCAACAAGGCTAACGTGCCCGTGGACT
TATCTGAACGCTCAACCTTCATGTGGGCATGGGCAGAGGGCCCCTATCCA
GAAATGCATAACAGTTTTGGGAGCGTCATTCTGAACTGGCGCGATGGCAC
CTGCGAGCCCCCTCTTATTTTACCTGAACTAGAAGGCTATTGGTTGCTAT
TTTTCCCCTTTCTTGCCGTGCTCGTGACGTGGACGTGCCTTCGCAACACA
CGGGTGGATGATTGCGGTAAGACCCTACTGCAGCGTCGGCTGGGCCCTAT
AATGCACATCCCTGCATGGCTGGATTGGGTTACTTGTGGCGTCATTCCTG
ATTTGTGTAACTTCAAGTACGGCGAACTTTTAATCACAGTGCTGTTTTAT
TTGCTACAAACCCTTTTGATTGTTTATTGGGCGTTGCGATATGGCGAATT
TAGTTTCAAGAGCATGGGAATTGCCTTCGGAAAGGCTGCGATGACCAATT
TGATGTTGTGCTATCTACCTGTCAACAAGACTTCGCTTTGGACTTACATC
TTTGGCATTTCTTTTGAGCGTGCGGTCAAATTTCATCGACATCTCTCTTA
TCTAATGCTGGCATATTCAATTCTTCATCTTGGCCTCCTTATCGAAATAA
ATCCTGTCTGGGGGCTTCCTCCTAAGCTTAATGGCGTAGTCATGGCCTAT
GGACTATGGGCTCTCATTGCTTTCCTCATCATGACTGTCACTGCGTTACT
TCGTCGCTGGCACTTTGAGTTATTCCGATATACGCACTACCTTTTTATAG
CGGGTACCGTGCTCACTCTTCTACACGTGCCCAAGGCTCTACCCTATATG
TGGATGCCCTGTCTCGTGCACGCGGCAGATTTTTTTTGGCGCTGGTGGGG
CGTGCTACGGGACATATCTGTTGCCAAGCTTTCCATCTTTCCTGACCACA
TTGCCCAGCTGGATGTCTTTTCTCAAGTACCTGGCGGGCCCAAGAGCATT
CTCAGTAGCTGCACTGGCCGCCAAGAACGCAAGTGGACCAAGCCCATTGA
GCCTGGTAGCTATGTTTTCGTCTGTATCCCCCGAATATCTCCTTGGCAAT
GGCACCCCATCAGCATTTCGACAGCCGGCATGAGCGTGCTTGGCGGTAGT
GCGATAGAGCCCTCTTACAGCTTGCACGTTAAGGGCCTCGGGGATGGCAC
GTGGACAGACCGCATCTATCGTCTGGCCGCGTCCAGGTCACTAACTGTTA
CACCTATATCAGAGGACATGGGTTTGACAGGTTCCGTTCCCACTTTCAGT
CCAGGAGATATCGCCATAATGGGAAGGCGGGGAAGGAGGAGCCCAACAGT
GGCCGCTGCCGGGGTGCCTGTCGCGACCCTGACGGCAGATATGGGGTTGA
CCGGCTCCATGCCCACATTCAGCTCGGGAGATGTCACGGCCACGAAGAGC
CCTAGAACTACTAGTTCTCGCATGTGGGATTATGGTCAGACCAGTCCTCG
TGCACTGATCTCGCCGATGAACAAAGTTGAAGGCCTGACCATTTTAGTGG
ATGGGCCTTACGGGAAGCTCTCCATAGATTTGAGCAACTACCGCAAGCTG
GTGCTGGTGGCTGGCGGGATCGGCATCACTCCCATGACAACAACCCTTTC
GTTTATCAGCCATCAGAAACGTCACCATCAATTGCCTTTGCTTGAGAGCG
TCATTCTTGTGTGGGCTGTCCGAAACAAAACGCTAGTGGATGGATTTATC
CCTTTTTTGGATCAGACCTTCTCGCAGCTCAATTCTCTGGAAACGCCTAG
CTTCTTCAAGGTGGAATTGTATGTGAGTATAGGATCGAAGTCCGCGGCTG
TTCCTGCTGCAGCAGACGCCGCTGGTAGTGCTAGAGTCATTGTCTCAGTT
GGTAATGGTGACGAAAACTCTGAGATGACGCGAGAGGCCGAGATGAATGG
TGCATCCGCTGAAGTGGAAAAGAGAGAGGTGAAGCAAACGATACGCATAG
GAAATAAGAGCCCTGAAGAGGGGAGTGGGACAGCGGTGAGTGCGGCGCCG
AGCCTCTTTAATATCCATTATGAACGGCCGGATATTGCGAGGGTGATGGA
AGGGTTGTTTGGAGAGAAGGAAAAAGTAAGCGAGGAAGTGGGTGTGCTGG
TGTGTGCATCGAAAGCTCTTTTGTTTGAAGTGCAGCGACAGTGCGTGCGC
TGGGACGTTGACTTGCACGCAGAGGAATTCGCTTGGTAGGATTGATGAAA
AAGGTTATAAAGAGAGGGTTGTGGAGAATGACTTAAATTGGGTATGCGCG
CTCGGCGTAATCTAAGGTGGTACGTAGATCGAAAACAAAATTAGGAAAAT
AGAGAGAGTGGAGAGAGTGGGGAAAAAAGTGGAGAGAGAGAAGATGACTA
TGTACACGGTACATGATACGATGTGTCAACCAGATTAATATAAGGCATGA
TAACCAGAAAGAAGAAGTACCACAGACAAGTGTATAATCGGCAATTTGGA
GAGGGTTCCACCTTAGAGAGACATGAGAAAAAGGTTGTGTGCCAAATAGA
AGTGAAAAAATGGTGAGGTCAATGATTGACAGACATGAAGGAGAGAAGAA
GTGAGAGACAAAGGGAGTGGTCTGAGGGAAAGCACAAAGAAGGATACAGA
GAGAGGGTCAAACTGTCTTACGCCCGTCAAGTGTGATTTCGTGGTTGAGT
CTTCCAGACGTTGTCATATGTGTGTGCATAACGA
back to top

protein sequence of NO14G00540.1

>NO14G00540.1-protein ID=NO14G00540.1-protein|Name=NO14G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1180bp
MGYCSGRAKLDDSIFTSIACLAVFVLGLGWAPVTHGWASSMIEADLCSTP
MTIGTIILNIPAYPIAANVSIGVYRDGVLLSPLDMTYFPNETLSLTLVST
LGEFTWETGGGAYFIGNDTGCPGNVRSANEAPTIVMPADDVSEVTIWGGH
HAAGELGVGIMRTVTLLPKVEAGIALPIVEKPKPSEHAAYFTATMVGLTA
TAFQAPAARMLLAGTLGMTYSQVYLIVSPAGPTAAGLGFHILRSDDGQDG
QNGRSLQSAPIPVATDLVLRLTNLGSEAEANSLLTPVGNYLSSPLANGFA
AQYRNVTDTPTTAPATYLVLRQSGATTFSVPALQASCILDVARSMALSWK
VDPNLDYVELQLEGAGQGWISGGLVSVDKLMVSRPRHKVLLYDYTAGSPI
FISLEGYLPKNLVEINASTYGVIPLLSQGAGGKLFMRYHQSINKANVPVD
LSERSTFMWAWAEGPYPEMHNSFGSVILNWRDGTCEPPLILPELEGYWLL
FFPFLAVLVTWTCLRNTRVDDCGKTLLQRRLGPIMHIPAWLDWVTCGVIP
DLCNFKYGELLITVLFYLLQTLLIVYWALRYGEFSFKSMGIAFGKAAMTN
LMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLAYSILHLGLLIEI
NPVWGLPPKLNGVVMAYGLWALIAFLIMTVTALLRRWHFELFRYTHYLFI
AGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRDISVAKLSIFPDH
IAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSYVFVCIPRISPWQ
WHPISISTAGMSVLGGSAIEPSYSLHVKGLGDGTWTDRIYRLAASRSLTV
TPISEDMGLTGSVPTFSPGDIAIMGRRGRRSPTVAAAGVPVATLTADMGL
TGSMPTFSSGDVTATKSPRTTSSRMWDYGQTSPRALISPMNKVEGLTILV
DGPYGKLSIDLSNYRKLVLVAGGIGITPMTTTLSFISHQKRHHQLPLLES
VILVWAVRNKTLVDGFIPFLDQTFSQLNSLETPSFFKVELYVSIGSKSAA
VPAAADAAGSARVIVSVGNGDENSEMTREAEMNGASAEVEKREVKQTIRI
GNKSPEEGSGTAVSAAPSLFNIHYERPDIARVMEGLFGEKEKVSEEVGVL
VCASKALLFEVQRQCVRWDVDLHAEEFAW*
back to top
Synonyms
Publications