NO14G00320, NO14G00320 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO14G00320 vs. NCBI_GenBank
Match: OEU18478.1 (hypothetical protein FRACYDRAFT_268323 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 95.1 bits (235), Expect = 9.600e-16 Identity = 77/314 (24.52%), Postives = 124/314 (39.49%), Query Frame = 0
Query: 410 SIRLRWGNTQEATSILAALNYLCK-DGKATMQEAGLC--CLEAVYPTHASLLAAFPSLEQSPLPPERWPAMGASPDGVIVWEDGTVEACECKNHAPFRENGAFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPKGRFIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLRLAR-SAQLIVKLSNEEVQRS 720
SIR+ WGN QE+TS+L ALNY K D + M+E G+C LE + LL GA+PD V+ DG++EA E KNH PF N + + ++ + G + ++ QL MLC+G C+SA+ V SA G+++LRL RDD ++ +ML ++ F YV P ++ + ++ A++ Y+ FL T R+ + + +L+ + N ++QR+
Sbjct: 15 SIRMIWGNVQESTSLLTALNYFWKLDNQVIMKEIGMCGAGLEINNTSTTGLL------------------FGATPDAVLCHPDGSIEAVEVKNHCPFIPNNYYNDKDRRSHTRKKINNNHRFRL----------------------------------------------------SRQELLPNNGGQATVMIHNIPQLMMEMLCIGDDCKSAIMVRQSAMTGSLILRLHRDDDWIKEMLYWLNRFNEDYVQKEILPPTNFFHKSMNESTSS-SIVDDDADQLRYKEFLNFTKRIEKDNVELLQHVPNRDIQRA 257
BLAST of NO14G00320 vs. NCBI_GenBank
Match: EWM24767.1 (hypothetical protein Naga_100255g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 94.4 bits (233), Expect = 1.600e-15 Identity = 64/157 (40.76%), Postives = 73/157 (46.50%), Query Frame = 0
Query: 188 AISLVPSQVYLSPRHK----HPTLIH-------------------LVRHAPSFPPSPP--------------------------SSSWRRNGNKPNIHWRAIPWAHLRSHPSFCSLPSSPLPPTSAADLGRYRQSSWEWGALHAGRLTTARVGGMLG 296
A LVPSQVYLSPRHK P L +V P+ PPS P N+HWRAIP+ HLR HPSF +LP S PP+ ADL +RQ SWEW ALH GRLTT+RVGG+LG
Sbjct: 126 APGLVPSQVYLSPRHKKRPPFPDLSTXXXXXXXXXXXXXXXXQDLIVLEVPACPPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVHWRAIPFPHLRQHPSFQALPPS-RPPSRLADLRFFRQDSWEWRALHVGRLTTSRVGGLLG 281
BLAST of NO14G00320 vs. NCBI_GenBank
Match: GAX85015.1 (hypothetical protein CEUSTIGMA_g12436.t1 [Chlamydomonas eustigma]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 0
Query: 584 GRFIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDF-----FLNGPKGLNSKAERAEY-RAFLEATLRLARSAQLIVKLSN 714
GR++I+D+GP ++ P + QL HML G C SA+ VS SATKG + R+ RD++YL ML K LDF P L S+++ Y A L TLR++RSA L+ ++++
Sbjct: 686 GRWVISDRGPRDQVSPLWIPQLQLHMLASG--CLSALLVSHSATKGTCVYRVYRDESYLTSMLSLA----------------KHAHAALDFRSSHQHCKLPSNLYSRSDLKRYHHALLHHTLRISRSAHLVARIAS 803
BLAST of NO14G00320 vs. NCBI_GenBank
Match: XP_003081274.2 (Restriction endonuclease type II-like [Ostreococcus tauri] >CEF99103.1 Restriction endonuclease type II-like [Ostreococcus tauri]) HSP 1 Score: 72.0 bits (175), Expect = 8.700e-9 Identity = 148/528 (28.03%), Postives = 200/528 (37.88%), Query Frame = 0
Query: 229 NGNKPNIHWRAIPWAHLRSHPSFCSLP-SSPLPPTSAADLGRYRQSSWEWGALHAGRLTTARVGGMLGFYEPASAVMLKVPRSLSSTAR----ATAARLHLLEPAPPGKDYVS---------FINTLTRQLQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARRFVYQYAPXXXXXKGPSSS---------------PSYSSVG---------------------SIRLRWGNTQEATSILAALNYLCKDGKATMQEAGLCCLEAVYPTHASLLAAFPS-LEQSPLPPERWPAMGASPDGVIVWEDGTVEACECKNHAPFRENGAFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPKGRFIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLRLARSA 706
+G PN+ WRA+ LRS SF LP S + RQ + W ALH GRLTT + LGF EPA R+L ++R ++ + L G D V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A A P SS +VG +IRL WG+ QEA+++ + +C +T+ EAGLC L+ A PS PLPP +GASPDG+I G A E KN +PFRE G ++IAD+ P+ + +H+AQ+ M+C + RSA+ S T G + R+ RDDA++ ML+ + Y+ P N + A++++ + + +RLAR A
Sbjct: 32 SGRVPNVFWRAVALDDLRSCVSFVGLPEESRIVIAGRRSFASVRQGTALWDALHDGRLTTGLLKNALGFCEPACD-----RRALGMSSRGHGGGISSVVSRLRRERVGVDDVDAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMDIMLASLLVKPATPKSSXXXXXXXXXXXXXXXXXXXAVGDDAAMLTNAQYCRALAKGGEMAIRLAWGSEQEASTL---CSLMCHFTGSTVYEAGLCMLDP---------ADIPSDWNVGPLPP-----VGASPDGLITLASGERFAVEVKNSSPFRE----------------------------------------------------------------------------MPGSYVIADREPYDKPPAYHMAQVQLEMIC--TNTRSALLAMQSMTYGIRVFRVERDDAFVASMLRRISRLYASYILKDREP-----------------PTNWEIHSADHKSMVRSAVRLAREA 442
BLAST of NO14G00320 vs. NCBI_GenBank
Match: KXZ53945.1 (hypothetical protein GPECTOR_6g863 [Gonium pectorale]) HSP 1 Score: 66.2 bits (160), Expect = 4.800e-7 Identity = 45/127 (35.43%), Postives = 59/127 (46.46%), Query Frame = 0
Query: 583 KGR----FIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLRLARSA 706
KGR +++D GP + P V Q+ HM G C S + VS SATKG ++ R+ RDD Y+ +M++ + YV P RP D F P Y AFL T RLAR A
Sbjct: 344 KGRLVSELVLSDPGPRRAVPPLWVPQVQMHMAAAG--CASGLIVSRSATKGLMVFRMWRDDEYVQRMMELLERVSAEYVRPG-------RPPPPDMFAREP----------AYVAFLSTTCRLARGA 451
BLAST of NO14G00320 vs. NCBI_GenBank
Match: XP_001690630.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 65.5 bits (158), Expect = 8.100e-7 Identity = 55/151 (36.42%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 583 KGR----FIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLRLARSAQLIVKLSNEEVQRSPYNDKFFWDD 730
KGR +++D GP + V QL HML G C+SA+ VS SA+KG + RL RDD YL +M+K + + YV R+ L P D F A + +Y AFL T RLAR A I V R P + DD
Sbjct: 500 KGRVHTELVLSDPGPRHAVPAAWVPQLQLHMLAAG--CQSALVVSRSASKGMTVFRLLRDDEYLQRMIKVLTRLNNEYV------RRGLTP-PPDMF----------ARQPDYCAFLGITARLARHA--IPLYPGRGVWRPPAEEALNRDD 629
BLAST of NO14G00320 vs. NCBI_GenBank
Match: PNW80802.1 (hypothetical protein CHLRE_07g330150v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 65.5 bits (158), Expect = 8.100e-7 Identity = 55/151 (36.42%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 583 KGR----FIIADQGPHTEIGPWHVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVGLFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLRLARSAQLIVKLSNEEVQRSPYNDKFFWDD 730
KGR +++D GP + V QL HML G C+SA+ VS SA+KG + RL RDD YL +M+K + + YV R+ L P D F A + +Y AFL T RLAR A I V R P + DD
Sbjct: 693 KGRVHTELVLSDPGPRHAVPAAWVPQLQLHMLAAG--CQSALVVSRSASKGMTVFRLLRDDEYLQRMIKVLTRLNNEYV------RRGLTP-PPDMF----------ARQPDYCAFLGITARLARHA--IPLYPGRGVWRPPAEEALNRDD 822 The following BLAST results are available for this feature:
BLAST of NO14G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00320 ID=NO14G00320|Name=NO14G00320|organism=Nannochloropsis oceanica|type=gene|length=5567bpback to top protein sequence of NO14G00320.1 >NO14G00320.1-protein ID=NO14G00320.1-protein|Name=NO14G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bpback to top Synonyms
Publications
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