NO14G00320.1, NO14G00320.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G00320.1
Unique Name	NO14G00320.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2908
Alignment location	chr14:134384..139950 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:134384..139950 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G00320.1 vs.
Match: XP_005786397.1 (hypothetical protein EMIHUDRAFT_111496 [Emiliania huxleyi CCMP1516]; EOD33968.1 hypothetical protein EMIHUDRAFT_111496 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 134.4 bits (337), Expect = 1.400e-27
Identity = 104/262 (39.69%), Postives = 136/262 (51.91%), Query Frame = 0

Query:  243 AHLRSHPSFCSLPSSP-LPPTSAADLGRYRQSSWEWGALHAGRLTTARVGGMLGFYEPASAVMLKVPRSLSSTARATAARLHLLEPAPPGKDYVSFINTLTRQLQGGREGKRGKEEEEEEEEEEEEENVWHEHRGNKAGKARRFVYQYAPPPPRKKGPSSSPSYSSVGSIRLRWGNTQEATSILAALNYLCKDGKATMQEAGLCCLEAVYPTHASLLAAFPSLEQSPLPPERWPAMGASPDGVIVWEDGTVEACECKNHAPF 504
            A LR+HP+F +LP +  + P +A+DL  YRQ S +W A HAGR++T+     LG YE  SA  L VP SL    +A  A   L   AP   DY    +              GK +    + ++    VW     + AG A  F  +Y P   R +       Y +VG +R+ WGN QEATS+LAA NYL     AT++EAGL  LEA+     S+LAA P      LPP     +GASPD ++ W DG+VE  E KNHAPF
Sbjct:    2 AELRAHPAFVALPPAHRVLPATASDLRLYRQDSDQWWACHAGRISTSACAACLGVYEERSAKELGVPPSLRGHGKALDAHARL--QAPLLADYALLRDAA------------GKVDSASADADDGHGAVWRSRPASSAG-AVPFQREYVPR--RSRRAEGGTPYRTVGQVRMAWGNAQEATSVLAAANYLWA-RNATVEEAGLQPLEAL---PESVLAALP----PGLPP-----IGASPDAIVRWPDGSVEPFEAKNHAPF 233

The following BLAST results are available for this feature:

BLAST of NO14G00320.1 vs.

BLAST of NO14G00320.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005786397.1	1.400e-27	39.69	hypothetical protein EMIHUDRAFT_111496 [Emiliania ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G00320	NO14G00320	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00320.1	NO14G00320.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00320.1.cds1	NO14G00320.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds2	NO14G00320.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds3	NO14G00320.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds4	NO14G00320.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds5	NO14G00320.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds6	NO14G00320.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds7	NO14G00320.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds8	NO14G00320.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds9	NO14G00320.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds10	NO14G00320.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds11	NO14G00320.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds12	NO14G00320.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds13	NO14G00320.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00320.1.cds14	NO14G00320.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:134384..139950+
coding sequence from alignment at chr14:134384..139950+

mRNA sequence

>NO14G00320.1 ID=NO14G00320.1|Name=NO14G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2908bp
ATGAGTGAGGATACCCGCCTCTACGGATGGCGATTCGCACCACTGCACCT
CCGCACCCACTGGTTTGCATCTCATATTCTTACTTCATTTCTCTTGCCTC
GCAGTCAAAAGGAAAGTTTCGTAGAGTACGGCATCCGCAAACTTGTCTTT
GATGCTGATTTATTCCGACTTTACTATGTTCCCCCCTTTGTTCCTTGTTT
GGCGCTGGCACAACTTCGATCCCATCCTTCCAGCGCAGCCAGTCCAGGCA
GCAATAGGGGTATAAGCGGAGCAGGAAGCAAGCAGCAGGTACAGCACCAC
ATCTTTTTGCTCTCGCCAGCTCCAGGTCGACCCTTCCTCTTCTCGACACC
ATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTTTTCGTCGCCCTCCTCAGCCTCCTCCTCCAAC
AATCCCCCCCCGCCCTCCCCTAACGAAGCCAAATACCATCGTCGCGCCAT
GGCACGGGAACGTCGGCGGAAGCGGCGGCAGCAGGATGAGGAAAACGACG
CCCAGGCCCCTGCCATCTCCCTAGTCCCCTCGCAGGTCTACCTCTCCCCT
CGGCATAAGCACCCCACCCTCATCCACCTCGTCCGCCACGCGCCCTCTTT
CCCTCCCTCCCCCCCTTCCTCCTCCTGGCGCCGCAACGGCAATAAGCCAA
ACATCCACTGGCGAGCCATCCCCTGGGCGCACCTCCGCTCCCACCCCTCC
TTCTGCTCCCTCCCTTCCTCGCCTTTGCCCCCTACCTCTGCTGCTGACTT
GGGGAGGTATAGGCAAAGCTCGTGGGAGTGGGGGGCACTACATGCCGGGA
GGTTGACGACGGCTCGAGTCGGGGGGATGCTGGGATTCTACGAACCAGCC
AGCGCCGTTATGCTCAAGGTCCCTCGCTCCCTATCCTCCACCGCTCGTGC
CACTGCCGCCCGTCTCCATCTCCTCGAGCCCGCCCCTCCTGGGAAGGATT
ATGTCTCCTTTATCAACACCCTCACTCGGCAGCTGCAGGGGGGGAGGGAG
GGAAAGAGGGGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGAACGTGTGGCATGAACACAGAGGCAACAAGGCGGGAAAGGCGAGGC
GGTTCGTCTACCAATATGCACCCCCGCCCCCACGGAAGAAGGGCCCGTCC
TCCTCCCCTTCCTACTCCTCCGTAGGATCCATCCGCCTCCGATGGGGCAA
CACGCAAGAAGCCACTTCCATCCTCGCAGCCCTTAACTACCTCTGTAAAG
ACGGGAAGGCGACCATGCAGGAAGCCGGATTGTGCTGCCTGGAAGCCGTG
TATCCCACGCATGCCTCCCTCCTCGCCGCCTTCCCCTCCCTCGAGCAGAG
CCCCCTCCCTCCCGAGCGATGGCCCGCCATGGGCGCCTCTCCCGACGGCG
TGATTGTGTGGGAGGACGGAACGGTGGAAGCGTGCGAGTGTAAAAACCAC
GCCCCCTTCCGAGAGAACGGCGCCTTCCGTCGAGGTGCCGGAGGAGGGCA
GGGGGGAGGGAGGGGGGGAGGAGCACCAAATGATGGAGGAGGAAAAGGAG
GAGGAGGAGGAGGAGAAAGAAAAGGAGGAGGAAGTCGGGGGAGGATTGGA
GACGGGAGCGGTGGGAAAAGTTTTAACAAGAATGTTGGGATGCAGGGAGG
GGGAGGAAGAGGAGGAGGGGGAGGAGGAGGAGGAAGGAAAATACCGAAAG
GCCGTTTCATCATTGCCGACCAGGGGCCGCACACCGAGATTGGGCCCTGG
CATGTAGCCCAGCTGTCGTGGCATATGCTCTGTCTAGGGCCCCACTGCCG
CTCCGCCGTCTTCGTCTCCTCCTCCGCGACCAAGGGCGCAGTCCTCCTCC
GCCTTCCCCGCGATGACGCCTACCTCGGGCAAATGCTTAAATTTGTCGGG
CTTTTCATTCACCGTTACGTCCCACCATCTCCCGCTCCCAGACAGAAGCT
CCGCCCCCTCGACTTGGATTTCTTCCTCAATGGGCCAAAAGGCCTCAACA
GCAAGGCAGAACGCGCAGAGTACAGAGCCTTCCTCGAGGCCACTCTCCGC
CTGGCCCGAAGCGCGCAGCTCATCGTGAAGCTGTCAAACGAAGAAGTGCA
ACGGAGCCCGTACAATGACAAGTTCTTCTGGGACGACGACGAGGGGGAGG
AGGAGGAAGGGGAGGAGGAGGAGGGATGGTAAGGAGGGAGGGGAAGGAGG
GACAGAGGGAGGGAGGAAGTGACTTGTGGGGAACGGCTTGTGGGATGCAG
CATCTTCATGAATATGTTGGGCATATGGTGGGTCCATAGGACGCGTCGTG
CAGACCGGATGACGAAGGAGGATTGGAAGGAGGGAGGCACCCTCCCGTAT
TGCTCTCAAGAAGGAAGGGAGGGAGGGGGAGGGAGGGAAGGTGGCGTAGA
TGACATCAAGTGAAGCTCAAGGAAAGCACCGATCTACAAACAAGTAGTAT
TAACATACCCGGAAATGACACGCACCGACCCGGTAACAAGTCACACTATG
CATATATATACATATATATTATATATTATGTGTGTATATGTACATATAAT
ATAAAATATATCTGATACCCGGAAATAAATGACACGCGTGCCACTAAGAG
AAAGAAGAATAGGGCGAAAGCACCGTATAGACGCGAATAAGGGAAGAAAA
TAAATAGAGCCGAAAGCTGTAATCTTATTCTCGGGTAGACAGAGGATGGA
GTCGCGGCTGATACATTCCAACTTATTACGTTGTTTTGAACGATATTAAT
GGCTCATGGTAGGATCGTTCTATTTGATACATGAGGCAGTACATCCCGCA
CTGAAGGCGAATGGACGGGACAGAAGGAAGGAAGTAACGGACAGTACATT
GGCCGATG

protein sequence of NO14G00320.1

>NO14G00320.1-protein ID=NO14G00320.1-protein|Name=NO14G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MSEDTRLYGWRFAPLHLRTHWFASHILTSFLLPRSQKESFVEYGIRKLVF
DADLFRLYYVPPFVPCLALAQLRSHPSSAASPGSNRGISGAGSKQQVQHH
IFLLSPAPGRPFLFSTPSSSSSSSSSSSSSSSSSSSSSSFSSPSSASSSN
NPPPPSPNEAKYHRRAMARERRRKRRQQDEENDAQAPAISLVPSQVYLSP
RHKHPTLIHLVRHAPSFPPSPPSSSWRRNGNKPNIHWRAIPWAHLRSHPS
FCSLPSSPLPPTSAADLGRYRQSSWEWGALHAGRLTTARVGGMLGFYEPA
SAVMLKVPRSLSSTARATAARLHLLEPAPPGKDYVSFINTLTRQLQGGRE
GKRGKEEEEEEEEEEEEENVWHEHRGNKAGKARRFVYQYAPPPPRKKGPS
SSPSYSSVGSIRLRWGNTQEATSILAALNYLCKDGKATMQEAGLCCLEAV
YPTHASLLAAFPSLEQSPLPPERWPAMGASPDGVIVWEDGTVEACECKNH
APFRENGAFRRGAGGGQGGGRGGGAPNDGGGKGGGGGGERKGGGSRGRIG
DGSGGKSFNKNVGMQGGGGRGGGGGGGGRKIPKGRFIIADQGPHTEIGPW
HVAQLSWHMLCLGPHCRSAVFVSSSATKGAVLLRLPRDDAYLGQMLKFVG
LFIHRYVPPSPAPRQKLRPLDLDFFLNGPKGLNSKAERAEYRAFLEATLR
LARSAQLIVKLSNEEVQRSPYNDKFFWDDDEGEEEEGEEEEGW*

mRNA from alignment at chr14:134384..139950+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G00320.1 ID=NO14G00320.1|Name=NO14G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=5567bp|location=Sequence derived from alignment at chr14:134384..139950+ (Nannochloropsis oceanica)
ATGAGTGAGGATACCCGCCTCTACGGATGGCGATTCGCACCACTGCACCT
CCGCACCCACTGGTTTGCATCTCATATTCTTACTTCATTTCTCTTGCCTC
GCAGTCAAAAGGAAAGTTTCGTAGAGTACGGCATCCGCAAACTTGTCTTT
GATGCTGATTTATTCCGACTTTACTATGTTCCCCCCTTTGTTCCTTGTTT
GGCGCTGGCACAACTTCGAGTAAGGCTAGAGCAACATATCAGGGAATAAT
TACGTGTCCAGTCAGTGCCCGAAAGGAGCTTTCCCACCCGATCGTCTGAC
CCTCTCACACTCCTCCTATCTCCATCCACACACAGAAGCCGCAGTCAAAC
AGTCACCCAGAGCGATCTTTGGACCGTCCTTTTCCCCCACTTGAGTGTCA
ATTTCGACCTACCCTTGCCCTGACTCCACCTCAGGATGCCTGAATGACGA
CCCGCCCTCTCTTTGCACTTTTTCTACTGCTGCCTCGCTCAATCCTCTTC
CTTCTTGCCGTTCTCCACCTTCTCAGTGTTGTGCTGGCATCGATTTCTTC
CCGTGTAGCATTTATCCAGTCCCATCCTTCCAGCGCAGCCAGTCCAGGCA
GCAATAGGGGTATAAGCGGAGCAGGAAGCAAGCAGCAGGTACGTAATGCG
AGCACGACAGTAGCTATGCCCCTAGGCACATGTGGTAATGCCCTCCTCTC
TTTCTAAATATAGGTACAGCACCACATCTTTTTGCTCTCGCCAGCTCCAG
GTCGACCCTTCCTCTTCTCGACACCATCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTTCGTC
GCCCTCCTCAGCCTCCTCCTCCAACAATCCCCCCCCGCCCTCCCCTAACG
AAGCCAAATACCATCGTCGCGCCATGGCACGGGAACGTCGGCGGAAGCGG
CGGCAGCAGGATGAGGAAAACGACGCCCAGGCCCCTGCCATCTCCCTAGT
CCCCTCGCAGGTATGTGTGTGGGAGTGTCTGTGTCCTCCATGGGTCTCTC
TTTGTACGACTTAAGCATTCCTAAGCAACAAACGACATGTGTACATGTCC
CGTCGAATGTTTTAATGTCGTCGTCCCTCCTCATCCACACACATGCAATC
ACCTCATCTTCTGTTCGGCCCCTTTTTCGTCCTCCTTCCATCCTTCCTCC
TCCCCCTCCCCACCACTCCTCACCCGGTAGGTCTACCTCTCCCCTCGGCA
TAAGCACCGTCCACCCTTCCCTTCCTTTGCTTCCTCCGGCGATTCCCCAC
CCCCTTCCTCCTCTCCTTCCTCCCCTCTCAGCTCTCCGCCCCTCTACGAC
GCCGAGGATGTCATTGTTCTCCAAGCGCCCTCCCTCCCTCCCTCCCCCTA
TCCCTCCCTCCCGACCTCTCCCCCGCCCACCACGCCCACACTAAAGCCAC
CCTCATCCACCTCGTCCGCCACGCGCCCTCTTTCCCTCCCTCCCCCCCTT
CCTCCTCCTGGCGCCGCAACGGCAATAAGCCAAACATCCACTGGCGAGCC
ATCCCCTGGGCGCACCTCCGCTCCCACCCCTCCTTCTGCTCCCTCCCTTC
CTCGCCTTTGCCCCCTACCTCTGCTGCTGACTTGGGGAGGTATAGGCAAA
GCTCGTGGGAGTGGGGGGCACTACATGCCGGGAGGTTGACGACGGCTCGA
GTCGGGGGGATGCTGGGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGTGGG
TGGGTGTGGTGAAGTTGTTGATTGCTGGGCATGCACTCTTCGTGCGGTCG
ACGTATAAGCTCACATCCTCTCCTTCTTGTCGTTACTCCACAGGATTCTA
CGAACCAGCCAGCGCCGTTATGCTCAAGGTATGCGACGCCCGCCCTCTCT
CCCTTCCTCCTTCCCTCCCTCTCTTCATCCTCCCCCTCCCCCCATTCTAC
CCTCCCTCCCTCCCTCCCTTCCTCTTTCCCTCCCTTCCTTCCCTTCCTAC
CTCTGTCGTCATCCCCTCTTTCACTTCCTCCCTCCCTCCCTTTCTCCCTC
TCCACTGCTCGTGCCTTCCCTGCTCATATATCCTCCCTCCCTCCTTCCCT
CCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCGCTCCCTCC
CTCCCTCCCTAGGTCCCTCGCTCCCTATCCTCCACCGCTCGTGCCACTGC
CGCCCGTCTCCATCTCCTCGAGCCCGCCCCTCCTGGGAAGGATTATGTCT
CCTTTATCAACACCCTCACTCGGCAGCTGCAGGGGGGGAGGGAGGGAAAG
AGGGGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAA
CGTGTGGCATGAACACAGAGGCAACAAGGCGGGAAAGGCGAGGCGGTTCG
TCTACCAATATGCACCCCCGCCCCCACGGAAGAAGGGTAGGTAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGCGGACA
TCATTACGAGTTAACCTTTTATTCCTCCTTTCCTCCCTCCCTCCCTCCCT
TAGGCCCGTCCTCCTCCCCTTCCTACTCCTCCGTAGGATCCATCCGCCTC
CGATGGGGCAACACGCAAGAAGCCACTTCCATCCTCGCAGCCCTTAACTA
CCTCTGTAAAGACGGGAAGGCGACCATGCGTACGTCCCCCTCCCTCCGGC
CCTCCCTCCCTCAAAAACCCATCCATTGCGATGCCATGATTCACCCCTCC
CTCCCTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCCGGTCC
TTGTAGAGGAAGCCGGATTGTGCTGCCTGGAAGCCGTGTATCCCACGCAT
GCCTCCCTCCTCGCCGCCTTCCCCTCCCTCGAGCAGAGCCCCCTCCCTCC
CGAGCGATGGCCCGCCATGGGCGCCTCTCCCGACGGCGTGATTGTGTGGG
AGGACGGAACGGTGAGGGGAGGTCGTGAGGGAGGGAGGGAGGGAGGGAGG
TGGGAGGGAGGGAGGGTGGGAGGAAAGGAAGGACAGCGTGCGTGGTGGAT
ATCATTATCATCATTGTACTCACTTTGTGACACTTTCCCTCCCTCCCTCC
CTCCCCCTCCCTTTCTCGGCAGGTGGAAGCGTGCGAGTGTAAAAACCACG
CCCCCTTCCGAGAGAACGGCGCCTTCCGTCGAGGTGCCGGAGGAGGGCAG
GGGGGAGGGAGGGGGGGAGGAGCACCAAATGATGGAGGAGGAAAAGGAGG
AGGAGGAGGAGGAGAAAGAAAAGGAGGAGGAAGTCGGGGGAGGATTGGAG
ACGGGAGCGGTGGGAAAAGTTTTAACAAGAATGTTGGGATGCAGGGAGGG
GGAGGAAGAGGAGGAGGGGGAGGAGGAGGAGGAAGGAAAATACCGAAAGG
CCGTTTCATCATTGCCGACCAGGGGCCGCACACGTACGTGGGACGTCGGT
CCCTCCCTTCCCCTCTCTTCCCTCTCCTCCCCCTTCCCATTGACCTGTTC
CGTGCAAAGCGGTCGGTTCCTCACCTCCCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTCTCGAAGCGAGATTGGGCCCTGGCATGTAGCCCAGCTGTCGTG
GCATATGCTCTGTCTAGGGCCCCACTGCCGCTCCGCCGTCTTCGTCTCCT
CCTCCGCGACCAAGGCATGTCCCCTCCCTCCCTCCCTCCCTCCCTCCCCC
CTCCCTCCTTTCTGGCGTCGCTTCTTCCCGGCCGCTCCACTGTCTTGTGT
CTCCCCCTTCACCAACTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTTCCTCCCTTCCTCCCTCTTTCTTGTTGCCCTTTCTTCC
CTTTCTCCATTTTTCTGCCGTAAATCCATACCTCATCCATTTTCTTCTTC
TCCTTCTCCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCTTCCTCCCTCTTCCTCCTCCACCACGCGCGCGACGACGTCCAACCTC
GGCCCATTACCCACACCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCTCCC
TCCCTTCCCCAGGGCGCAGTCCTCCTCCGCCTTCCCCGCGATGACGCCTA
CCTCGGGCAAATGCTTAAATTTGTCGGGCTTTTCATTCACCGTTACGTCC
CACCATCTCCCGCTCCCAGACAGAAGGCAAGTCTTCATGAAATGTTCGCT
CCCTCCCTCCCTCCCTCCCTCCCTTCTCTCCTTCTCTTTTCCCTCCATTT
CACTCTTTTCACTTCCTCCCTCCCTCCCTTCCCTCTCTCCCTTCCTTTCT
CCTTCCCCCTCCCCCTGACTATCGCCTGCGGTTGCTGCTCCATGCGTTTC
TCTCCTCCCTCCCTCTCTTCCTTTCTCAACCCCCCTCTGTACTACCCCCA
CCTATTCCACTCTCTTATAACCCTGCGCCTTCCCCTCCCTCCGTCCCTCC
CTCCGCCCCTCCCTCCGCCCCTCCCTCCGTCCCTCCCTCCTTCAGCTCCG
CCCCCTCGACTTGGATTTCTTCCTCAATGGGCCAAAAGGCCTCAACAGCA
AGGCAGAACGCGCAGAGTACAGGTAACCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTCCCTCCGTCCCTCCGGGCATCATCTCACATCC
CACCCGCCCCGATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGAGCCTTCCTCGAGGCC
ACTCTCCGCCTGGCCCGAAGCGCGCAGCTCATCGTGAAGCTGTCAAACGA
AGAAGTGCAACGGAGCCCGTACAATGACAAGTTCTTCTGGGACGACGACG
AGGGGGAGGAGGAGGAAGGGGAGGAGGAGGAGGGATGGTAAGGAGGGAGG
GGAAGGAGGGACAGAGGGAGGGAGGAAGTGACTTGTGGGGAACGGCTTGT
GGGATGCAGCATCTTCATGAATATGTTGGGCATATGGTGGGTCCATAGGA
CGCGTCGTGCAGACCGGATGACGAAGGAGGATTGGAAGGAGGGAGGCACC
CTCCCGTATTGCTCTCAAGAAGGAAGGGAGGGAGGGGGAGGGAGGGAAGG
TGGCGTAGATGACATCAAGTGAAGCTCAAGGAAAGCACCGATCTACAAAC
AAGTAGTATTAACATACCCGGAAATGACACGCACCGACCCGGTAACAAGT
CACACTATGCATATATATACATATATATTATATATTATGTGTGTATATGT
ACATATAATATAAAATATATCTGATACCCGGAAATAAATGACACGCGTGC
CACTAAGAGAAAGAAGAATAGGGCGAAAGCACCGTATAGACGCGAATAAG
GGAAGAAAATAAATAGAGCCGAAAGCTGTAATCTTATTCTCGGGTAGACA
GAGGATGGAGTCGCGGCTGATACATTCCAACTTATTACGTTGTTTTGAAC
GATATTAATGGCTCATGGTAGGATCGTTCTATTTGATACATGAGGCAGTA
CATCCCGCACTGAAGGCGAATGGACGGGACAGAAGGAAGGAAGTAACGGA
CAGTACATTGGCCGATG

Coding sequence (CDS) from alignment at chr14:134384..139950+

>NO14G00320.1 ID=NO14G00320.1|Name=NO14G00320.1|organism=Nannochloropsis oceanica|type=CDS|length=2232bp|location=Sequence derived from alignment at chr14:134384..139950+ (Nannochloropsis oceanica)
ATGAGTGAGGATACCCGCCTCTACGGATGGCGATTCGCACCACTGCACCT
CCGCACCCACTGGTTTGCATCTCATATTCTTACTTCATTTCTCTTGCCTC
GCAGTCAAAAGGAAAGTTTCGTAGAGTACGGCATCCGCAAACTTGTCTTT
GATGCTGATTTATTCCGACTTTACTATGTTCCCCCCTTTGTTCCTTGTTT
GGCGCTGGCACAACTTCGATCCCATCCTTCCAGCGCAGCCAGTCCAGGCA
GCAATAGGGGTATAAGCGGAGCAGGAAGCAAGCAGCAGGTACAGCACCAC
ATCTTTTTGCTCTCGCCAGCTCCAGGTCGACCCTTCCTCTTCTCGACACC
ATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTTTTCGTCGCCCTCCTCAGCCTCCTCCTCCAAC
AATCCCCCCCCGCCCTCCCCTAACGAAGCCAAATACCATCGTCGCGCCAT
GGCACGGGAACGTCGGCGGAAGCGGCGGCAGCAGGATGAGGAAAACGACG
CCCAGGCCCCTGCCATCTCCCTAGTCCCCTCGCAGGTCTACCTCTCCCCT
CGGCATAAGCACCCCACCCTCATCCACCTCGTCCGCCACGCGCCCTCTTT
CCCTCCCTCCCCCCCTTCCTCCTCCTGGCGCCGCAACGGCAATAAGCCAA
ACATCCACTGGCGAGCCATCCCCTGGGCGCACCTCCGCTCCCACCCCTCC
TTCTGCTCCCTCCCTTCCTCGCCTTTGCCCCCTACCTCTGCTGCTGACTT
GGGGAGGTATAGGCAAAGCTCGTGGGAGTGGGGGGCACTACATGCCGGGA
GGTTGACGACGGCTCGAGTCGGGGGGATGCTGGGATTCTACGAACCAGCC
AGCGCCGTTATGCTCAAGGTCCCTCGCTCCCTATCCTCCACCGCTCGTGC
CACTGCCGCCCGTCTCCATCTCCTCGAGCCCGCCCCTCCTGGGAAGGATT
ATGTCTCCTTTATCAACACCCTCACTCGGCAGCTGCAGGGGGGGAGGGAG
GGAAAGAGGGGGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGAACGTGTGGCATGAACACAGAGGCAACAAGGCGGGAAAGGCGAGGC
GGTTCGTCTACCAATATGCACCCCCGCCCCCACGGAAGAAGGGCCCGTCC
TCCTCCCCTTCCTACTCCTCCGTAGGATCCATCCGCCTCCGATGGGGCAA
CACGCAAGAAGCCACTTCCATCCTCGCAGCCCTTAACTACCTCTGTAAAG
ACGGGAAGGCGACCATGCAGGAAGCCGGATTGTGCTGCCTGGAAGCCGTG
TATCCCACGCATGCCTCCCTCCTCGCCGCCTTCCCCTCCCTCGAGCAGAG
CCCCCTCCCTCCCGAGCGATGGCCCGCCATGGGCGCCTCTCCCGACGGCG
TGATTGTGTGGGAGGACGGAACGGTGGAAGCGTGCGAGTGTAAAAACCAC
GCCCCCTTCCGAGAGAACGGCGCCTTCCGTCGAGGTGCCGGAGGAGGGCA
GGGGGGAGGGAGGGGGGGAGGAGCACCAAATGATGGAGGAGGAAAAGGAG
GAGGAGGAGGAGGAGAAAGAAAAGGAGGAGGAAGTCGGGGGAGGATTGGA
GACGGGAGCGGTGGGAAAAGTTTTAACAAGAATGTTGGGATGCAGGGAGG
GGGAGGAAGAGGAGGAGGGGGAGGAGGAGGAGGAAGGAAAATACCGAAAG
GCCGTTTCATCATTGCCGACCAGGGGCCGCACACCGAGATTGGGCCCTGG
CATGTAGCCCAGCTGTCGTGGCATATGCTCTGTCTAGGGCCCCACTGCCG
CTCCGCCGTCTTCGTCTCCTCCTCCGCGACCAAGGGCGCAGTCCTCCTCC
GCCTTCCCCGCGATGACGCCTACCTCGGGCAAATGCTTAAATTTGTCGGG
CTTTTCATTCACCGTTACGTCCCACCATCTCCCGCTCCCAGACAGAAGCT
CCGCCCCCTCGACTTGGATTTCTTCCTCAATGGGCCAAAAGGCCTCAACA
GCAAGGCAGAACGCGCAGAGTACAGAGCCTTCCTCGAGGCCACTCTCCGC
CTGGCCCGAAGCGCGCAGCTCATCGTGAAGCTGTCAAACGAAGAAGTGCA
ACGGAGCCCGTACAATGACAAGTTCTTCTGGGACGACGACGAGGGGGAGG
AGGAGGAAGGGGAGGAGGAGGAGGGATGGTAA

Synonyms

Publications