NO14G00170, NO14G00170 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00170 vs. NCBI_GenBank
Match: CBJ27669.1 (YihA4, YihA/EngB-like GTPase [Ectocarpus siliculosus]) HSP 1 Score: 164.9 bits (416), Expect = 9.500e-37 Identity = 85/159 (53.46%), Postives = 110/159 (69.18%), Query Frame = 0
Query: 440 KRGDTVGATRMVGGMVGWGVKPMMEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGR-VLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKTKNSFYMVDIPGIGYAKVSDE 598
KRGD A R++ M + N LL+ K+ +E +F LD+M G+ D ++Y + N V+ V+FV GAVSM TLP VLPE FIGRSNVGKSSL+NMVCNRK LA+ SKRPGKTQQFNYFL+N+ T+N+FY+VD+PG+GYAKV ++
Sbjct: 348 KRGD---AMRLLEAMANARLPVKTPAANRLLQGFHKRRDLEAVFKVLDVMAAAGVDGDDETYEWLANAAVRGVDFVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFLMNNNTENAFYLVDLPGMGYAKVPEK 503
BLAST of NO14G00170 vs. NCBI_GenBank
Match: EWM24777.1 (hypothetical protein Naga_100446g1 [Nannochloropsis gaditana]) HSP 1 Score: 155.6 bits (392), Expect = 5.800e-34 Identity = 122/264 (46.21%), Postives = 149/264 (56.44%), Query Frame = 0
Query: 10 RRRCSSLFGLWALRTLYAVGRAGVGAFQCRGMSGIGIGGIKGTRGGGQMEQQYCHHQ---HHRALSPAVL-SASLWSTSSSSPLVLHLPSFSSSCSPRP--PPWRVAALFRHSGRSLVLXXXXXXXXXXXXXXXXXXXXXXXXGLLGSVDK----AGADLAALELDHDMFKESSKTRRRELREANRRAKEREMKCKEKRLRNSGHSSSSGNAHNEKGKERAALQRQAGPPTATNEEEALLQAKVYRKVEAPKRLIELATLAMAG 264
+RRCSSL GLWA+RTLYA+ RAGVGAFQ RG SG G+ GI G R G ++Q HHQ + SP + +LW V+ + + PRP P R RH G LG+ D+ + ADLAALE + F E+ K RRR LRE+NRRAKE+E+K K K + S GN HNE GKE+AALQR+AGP +ATNEEEAL QAK+YRKVEAPKRL+ELA +A G
Sbjct: 3 KRRCSSLLGLWAIRTLYALNRAGVGAFQSRGFSGPGLLGIGGPRAG---QKQPLHHQCRGYPYPSSPVLYHHGNLWLPPKRHAGVM---ASKGAGEPRPADPSAREDEGKRHEG-------------------------------LGAEDEKLEFSEADLAALE--QEFFTENPKARRRRLRESNRRAKEQELKKKGK--NGAKESRGPGNPHNEAGKEKAALQREAGPASATNEEEALRQAKIYRKVEAPKRLVELAGIAAVG 225
BLAST of NO14G00170 vs. NCBI_GenBank
Match: XP_005714941.1 (unnamed protein product [Chondrus crispus] >CDF35122.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 152.5 bits (384), Expect = 4.900e-33 Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = 0
Query: 429 GLLTTVGKAYLKRGDTVGATRMVGGMVGWGVK------PMMEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKTKNS-FYMVDIPGIGYAKV 595
G L V A+L DT A + + ++ P+ E N+ +R GK + G+F LDLM+ + + ++Y + N V+ V+FV GAVSMDTLP + EV F+GRSNVGKSSL+NM+CNRK LAYVS PGKTQQFNYF VN K + S FYMVD+PG+GYA+V
Sbjct: 171 GALLQVMNAFLTASDTARAIEALQTIQTLPIQDDAAALPIKEY-NNCIRVLGKSRSMPGVFAILDLMKASKVEANNETYEFLANAAVRQVDFVTGAVSMDTLPPPITTEVAFVGRSNVGKSSLVNMLCNRKALAYVSGTPGKTQQFNYFHVNAKDQESQFYMVDLPGVGYARV 342
BLAST of NO14G00170 vs. NCBI_GenBank
Match: KOO21924.1 (ribosome biogenesis gtp-binding protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 139.4 bits (350), Expect = 4.300e-29 Identity = 76/164 (46.34%), Postives = 99/164 (60.37%), Query Frame = 0
Query: 439 LKRGDTVGATRMVGGMVGWG--VKPMMEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKTK------NSFYMVDIPGIGYAKV 595
L GD GA + MV P + L R GK + G++ L+ GGL DA+S + + LV+S FV G VSMDTLP +PEV FIGRSNVGKSSL+NMV R+ +AY SK PGKTQQ+NYF++N+ +F++VD+PG+GYAKV
Sbjct: 18 LDAGDLDGACTLAEAMVSAAPLCVPPLHTLTKLTRAFGKARCMPGVYACLEAQLAGGLEADAESLQVLVDALVRSARFVKGGVSMDTLPREPIPEVAFIGRSNVGKSSLVNMVLGRRAIAYTSKTPGKTQQYNYFILNEPAAGQRAAVGTFHVVDMPGLGYAKV 181
BLAST of NO14G00170 vs. NCBI_GenBank
Match: XP_005793605.1 (GTP-binding protein engB [Emiliania huxleyi CCMP1516] >EOD41176.1 GTP-binding protein engB [Emiliania huxleyi CCMP1516]) HSP 1 Score: 134.4 bits (337), Expect = 1.400e-27 Identity = 68/134 (50.75%), Postives = 91/134 (67.91%), Query Frame = 0
Query: 463 MEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVND-KTKNSFYMVDIPGIGYAKVS 596
+E L R GK V G++ L+ GG+ PDA+ + + LV +V FV G VSM+TLP L EV F+GRSNVGKSSL+NMV R+ +AY SK PGKTQQ+NYF VN+ + SF++VD+PG+G+AKV+
Sbjct: 269 LETLKALTRAFGKARCVGGVYACLEAAESGGIAPDAELLQVLVDALVHAVRFVKGGVSMETLPTGGLAEVAFVGRSNVGKSSLVNMVLGRRAIAYTSKTPGKTQQYNYFAVNEGRAVGSFHLVDMPGLGFAKVA 402
BLAST of NO14G00170 vs. NCBI_GenBank
Match: XP_005708400.1 (GTP-binding protein [Galdieria sulphuraria] >EME31880.1 GTP-binding protein [Galdieria sulphuraria]) HSP 1 Score: 131.7 bits (330), Expect = 8.900e-27 Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 467 NDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVN-DKTKNSFYMVDIPGIGYAKVSDE 598
N LL K +EG++ T+++ + + D+D+ + +K + FV GAVSM+TLP + LPEV F+G+SNVGKSSLLN++ N +AY SK PGKTQQ NYF+VN + F+MVD+PG GYA+VS E
Sbjct: 237 NKLLTIYSKAKSLEGLYATIEMKKRCNVVSDSDTNTLLAGAFIKEIHFVTGAVSMETLP-KPLPEVAFVGKSNVGKSSLLNLLVNNYSIAYTSKTPGKTQQLNYFIVNRSQEDGKFFMVDLPGYGYARVSKE 367
BLAST of NO14G00170 vs. NCBI_GenBank
Match: XP_005538155.1 (similar to GTP-binding protein [Cyanidioschyzon merolae strain 10D] >BAM82119.1 similar to GTP-binding protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 125.2 bits (313), Expect = 8.400e-25 Identity = 65/127 (51.18%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 470 LRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVND-KTKNSFYMVDIPGIGYAKVS 596
+R K G+F T+D ++ GL A + + V+ V FV GAVSMDT+P PE F GRSNVGKSSL+NMV RK LA SK PGKT+Q+N++LVN+ N+FY+VD+PG GYAKVS
Sbjct: 260 MRMFSKARDFRGLFLTMDAVQLCGLSLSAAVLDCLAQCAVREVSFVTGAVSMDTMPDGRFPEAAFFGRSNVGKSSLVNMVIGRKALAKTSKTPGKTKQYNFYLVNEGDPTNAFYLVDLPGAGYAKVS 386
BLAST of NO14G00170 vs. NCBI_GenBank
Match: CBN77943.1 (YihA5, YihA/EngB-like GTPase [Ectocarpus siliculosus]) HSP 1 Score: 123.2 bits (308), Expect = 3.200e-24 Identity = 65/134 (48.51%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 467 NDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPG--RVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVND--KTKNSFYMVDIPGIGYAKVSD 597
N L+R+ GK R+ +F LD M G+ + ++ N +K VEF AVSM TLP LPEV F+GRSNVGKSSL+NM+ NRK LA S PG TQ FNY+ VN + SF++VD+PG+GYA+ D
Sbjct: 408 NQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADD 541
BLAST of NO14G00170 vs. NCBI_GenBank
Match: GAX23614.1 (hypothetical protein FisN_12Hh186 [Fistulifera solaris]) HSP 1 Score: 122.5 bits (306), Expect = 5.400e-24 Identity = 64/113 (56.64%), Postives = 72/113 (63.72%), Query Frame = 0
Query: 501 YNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKT-----------------KNSFYMVDIPGIGYAKVSD 597
Y + N L++ V FV GAV M P EV FIGRSNVGKSSL+NMV NRK LA+VSKRPGKTQQFN+F VNDK +SFYMVD+PG GYAKV D
Sbjct: 338 YEQLSNALIRRVVFVTGAVDMQKCPPADRGEVAFIGRSNVGKSSLVNMVTNRKSLAFVSKRPGKTQQFNFFAVNDKAGVEKEIKYGDLVEGEKDADSFYMVDLPGFGYAKVPD 450
BLAST of NO14G00170 vs. NCBI_GenBank
Match: GAX15120.1 (GTP-binding protein [Fistulifera solaris]) HSP 1 Score: 120.2 bits (300), Expect = 2.700e-23 Identity = 62/113 (54.87%), Postives = 71/113 (62.83%), Query Frame = 0
Query: 501 YNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKT-----------------KNSFYMVDIPGIGYAKVSD 597
Y + N L++ V FV GAV M P EV FIGRSNVGKSSL+NMV NRK +A+VSKRPGKTQQFN+F VNDK +SFYMVD+PG GYAK D
Sbjct: 337 YEQLSNALIRRVVFVTGAVDMQKCPPADRGEVAFIGRSNVGKSSLVNMVTNRKSIAFVSKRPGKTQQFNFFAVNDKAGVEKEIKYGDVVEGEKDADSFYMVDLPGFGYAKAPD 449 The following BLAST results are available for this feature:
BLAST of NO14G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00170 ID=NO14G00170|Name=NO14G00170|organism=Nannochloropsis oceanica|type=gene|length=5164bpback to top protein sequence of NO14G00170.6 >NO14G00170.6-protein ID=NO14G00170.6-protein|Name=NO14G00170.6|organism=Nannochloropsis oceanica|type=polypeptide|length=524bpback to top protein sequence of NO14G00170.5 >NO14G00170.5-protein ID=NO14G00170.5-protein|Name=NO14G00170.5|organism=Nannochloropsis oceanica|type=polypeptide|length=710bpback to top protein sequence of NO14G00170.4 >NO14G00170.4-protein ID=NO14G00170.4-protein|Name=NO14G00170.4|organism=Nannochloropsis oceanica|type=polypeptide|length=715bpback to top protein sequence of NO14G00170.3 >NO14G00170.3-protein ID=NO14G00170.3-protein|Name=NO14G00170.3|organism=Nannochloropsis oceanica|type=polypeptide|length=827bpback to top protein sequence of NO14G00170.2 >NO14G00170.2-protein ID=NO14G00170.2-protein|Name=NO14G00170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=719bpback to top protein sequence of NO14G00170.1 >NO14G00170.1-protein ID=NO14G00170.1-protein|Name=NO14G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=660bpback to top Synonyms
Publications
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