NO14G00170.4, NO14G00170.4 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G00170.4
Unique Name	NO14G00170.4
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3483
Alignment location	chr14:64739..69902 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:64739..69902 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO14G00170.4 vs.
Match: CBJ27669.1 (YihA4, YihA/EngB-like GTPase [Ectocarpus siliculosus])

HSP 1 Score: 260.4 bits (664), Expect = 1.700e-65
Identity = 169/393 (43.00%), Postives = 224/393 (57.00%), Query Frame = 0

Query:  321 KKGGKKGLPACYAEALKWLCRLGSSE--SGVHSSTGGREGGREGGREGGGAETMKKAEVRAREEEETGRREGSMALALETLTLLGVLGGGREGGREGGVGPLGLSLEEVGGLLTTVGKAYLKRGDTVGATRMVGGMVGWGVKPMMEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADSYNHVGNTLVKSVEFVAGAVSMDTLPGR-VLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKTKNSFYMVDIPGIGYAKVPLTEKSKWAAFFEAYLARRPSLRVVFHLIDARHGPLAQDVATMQAMRTSLRPGVQYVVILTKADKKDGKVSPLLQQQVADALDSFDLKETTPVIATSAVNRLGRDEVWRYLRLAVI 711
            K+ G +GLP   A A+K   +L   +    V  + G  +      R   GA+ + +    A E           A A E +   G   GG +   E  V     +   V   L T      KRGD   A R++  M    +       N LL+   K+  +E +F  LD+M   G+  D ++Y  + N  V+ V+FV GAVSM TLP   VLPE  FIGRSNVGKSSL+NMVCNRK LA+ SKRPGKTQQFNYFL+N+ T+N+FY+VD+PG+GYAKVP  ++ +W+  F +Y+ RR SLRV+FHLID RHGP+ QD A M+ M   L    +YVV+LTKADK D  VS  + + V  AL    +   TPV+ TSA ++LGRD +WRYLRLA +
Sbjct:  241 KRNGIEGLPDLAAAAVKEELKLSRVDLARSVIETLGAEQWDAWLARHLDGAQAVVRCACAASEA----------AFAEELIAKAGFSCGGGDELAEEFVS----AATSVYPNLITAFSRNGKRGD---AMRLLEAMANARLPVKTPAANRLLQGFHKRRDLEAVFKVLDVMAAAGVDGDDETYEWLANAAVRGVDFVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFLMNNNTENAFYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRHGPVGQDHAIMKLM-AELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSR-TPVVLTSAASKLGRDGMWRYLRLAAL 614

The following BLAST results are available for this feature:

BLAST of NO14G00170.4 vs.

BLAST of NO14G00170.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ27669.1	1.700e-65	43.00	YihA4, YihA/EngB-like GTPase [Ectocarpus siliculos...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G00170	NO14G00170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00170.4	NO14G00170.4-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00170.4.cds1	NO14G00170.4.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds2	NO14G00170.4.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds3	NO14G00170.4.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds4	NO14G00170.4.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds5	NO14G00170.4.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds6	NO14G00170.4.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds7	NO14G00170.4.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds8	NO14G00170.4.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00170.4.cds9	NO14G00170.4.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:64739..69902-
coding sequence from alignment at chr14:64739..69902-

mRNA sequence

>NO14G00170.4 ID=NO14G00170.4|Name=NO14G00170.4|organism=Nannochloropsis oceanica|type=mRNA|length=3483bp
CTTCTTTCCTATCGTTGACCTATGCCTTTCCCCCTTCTTCACTCATTTCC
TTGACGACCGGCGGCTTTCTCTTCTCCTCATCTCCTTCTGTGATCTCCCC
GCTTCGCTTTTCTCCCTCATTCTCCTCCTTCTTTTCAGCGATTTCGACTT
TTGCGGCCGCCTTGACCTCCTCCGCTTCGACCAAGGCCTGGAATTCGGCA
CGGCCTTCGTCCGTCCGCAAGTGCTGGAATAACAAGGTCATCAGGTCGCT
CAAGTCTACTTCCTCCCCGCTCTCATCTCCTACTCCGACTTGCCCCGCCT
CCTCTAGTCCTGCCGTTGCGTCTGACAAAGAATTGGTTGGTGATCCTGTT
GTACCCTTGGCTGTCGGCTCGGCTGTGGCCTCTCCTCGTTCGATGGACGT
GATGTGCGGCTCACCATCGCCGCCTGCTGTGAGAGGGGCAGGAGAAGGAA
GAAGAAGACTGCTGGTATCGCTGGTGCTGGCTGTGGTGTTGGTAGAACTC
ATGGCGGCTTGGGGCGGCTTGCTTGGTCTGTATGGGGAAGGCGGCGGAAA
AAGAAGGGGAGTGTGTGTGTGTCGATGCCGGTGTTTTCCAAGGTCAACAC
AGGAAGTGCCGACGGCCGGAGTAGCGACTGAGCATGGCACCAGATAGTGG
CATCTTTAGCCAAAGCTCCAGACAGCGTGGGGGCAGCCCTGCTTTGGTAC
AGTGGTAGTCCTATTGGTTTGTGGTAGCAGGGCTACTCCTTTACATTAAG
AGACAGACCAATTTTAAGGGACTCGCTTGGACATTTACTGTTGATACAGG
TAATTAAAGCGCATATCATGCACGCTTGCACGTCATGTACATCCACACAC
CCCGCACTCACGTTTCCATCTTTAGTTTCGTTATACTTCCTTGGTGTCTT
CTCCTTTCTTTTTTCTCTCTTCACTTTCAACGTCAACTATCAACGACGAA
CCCTCGTTTCACCCATCCAGCCAGCTACGACGTGGCTTACGCATACCTAC
CCTTTCTCCTCACACGCATAGATAAATGCATATTTGCTAAAACAACTACA
GAACAAGAGCGGTAAGCAAGGACGAGCTGAGGACGAAGACTACGACAAGG
AAATCTCCTCCCTATGCCTCCCACCAGCAGCAGCAGCCCCAGACGGCGTT
GCTCATCCCTTTTTGGCCTGTGGGCGCTTCGAACCTTGTACGCAGTAGGT
CGTGCTGGCGTCGGTGCCTTTCAGTGTCGGGGTATGAGCGGCATCGGGAT
AGGAGGGATAAAGGGAACAAGAGGAGGAGGGCAGATGGAGCAACAGTACT
GCCATCACCAGCATCATCGAGCTTTGTCACCAGCCGTGCTATCCGCATCG
CTGTGGTCGACGTCTTCCTCCTCTCCTCTAGTCCTTCACCTCCCCTCCTT
CAGCTCATCCTGCTCTCCTCGCCCTCCACCATGGCGAGTAGCCGCCCTCT
TCAGGCATAGCGGCAGAAGCCTTGTGCTGGTACGAAGTGCAGGTGGAGGA
GGCCATGGTCATGCAGACAGCGAGCGGAGGAAGGAGGACGAAGAGAAGGA
AGGGCTCCTGGGAAGCGTGGACAAAGCTGGGGCGGACTTGGCAGCACTGG
AGTTAGACCATGACATGTTCAAGGAATCCTCCAAGACCCGCCGTCGAGAA
TTGCGCGAAGCCAATCGTCGGGCAAAAGAGCGCGAAATGAAATGTAAGGA
GAAAAGGCTCCGCAACAGCGGTCACAGCAGCAGCAGCGGCAACGCCCACA
ACGAGAAGGGAAAAGAGCGCGCAGCACTGCAGCGGCAGGCGGGTCCACCC
ACAGCGACAAACGAGGAAGAGGCCCTGCTTCAGGCTAAAGTCTATCGAAA
GGTGGAGGCCCCCAAGCGCCTGATCGAATTAGCCACACTGGCCATGGCTG
GCGACTTCCTCACACCGCAAGTCCTCAAGGTGACTGTCCGGGCCGAGATG
GACATGCGACGACCTGACCTAGCGTCCGAACTCGTGCAAAGCGCCCTCAG
CCACTGGCGAGAGCAAGTGCTGCTCCTGCCAGCAAGGGAGGAAGGGGGGG
AGGGAGGGCGAGGGGAGGCAGGGAAGAAAGGAGGGAAGAAGGGGCTCCCG
GCGTGCTATGCGGAAGCATTGAAGTGGCTGTGTCGACTCGGATCCAGCGA
GTCCGGGGTCCACAGCTCGACGGGAGGGAGGGAGGGCGGGAGGGAGGGCG
GGAGGGAGGGAGGGGGGGCAGAGACCATGAAAAAGGCCGAGGTGCGAGCA
AGGGAGGAGGAGGAGACGGGACGGAGGGAGGGAAGCATGGCCCTCGCTCT
CGAGACCTTGACGCTGCTCGGCGTTTTGGGGGGAGGGCGGGAGGGCGGGA
GGGAGGGAGGGGTGGGGCCGTTGGGCCTGTCGTTGGAGGAGGTGGGCGGG
CTCTTGACGACGGTGGGAAAGGCGTATCTGAAGAGGGGAGACACGGTGGG
CGCAACTCGGATGGTGGGGGGGATGGTAGGATGGGGGGTGAAGCCGATGA
TGGAGGTGTGCAACGACCTCTTGCGGCAGCAGGGGAAGCAGGGGCGGGTG
GAGGGAATGTTTCACACGCTGGACCTGATGAGGGAGGGCGGGTTGCACCC
GGACGCCGACTCGTACAACCACGTGGGGAATACTCTTGTTAAGTCCGTGG
AATTCGTGGCCGGGGCGGTGAGCATGGACACGCTGCCGGGGAGGGTATTG
CCCGAGGTCTGCTTCATCGGCCGGTCCAATGTCGGAAAGTCCAGCCTCTT
GAACATGGTGTGCAACCGCAAAGACCTCGCCTACGTCTCTAAGCGCCCGG
GTAAGACCCAGCAGTTTAATTACTTCCTCGTGAACGACAAGACCAAAAAC
AGCTTCTACATGGTCGATATCCCCGGCATTGGTTATGCAAAGGTCCCCCT
TACCGAGAAGAGCAAGTGGGCTGCCTTCTTCGAGGCCTACCTCGCCCGCC
GTCCCTCCCTCCGTGTCGTTTTCCACCTCATCGATGCCCGCCACGGCCCC
CTCGCTCAGGATGTGGCCACTATGCAAGCCATGCGAACCTCTCTCCGACC
AGGCGTGCAGTACGTGGTCATCCTGACCAAGGCCGACAAGAAGGACGGTA
AGGTCTCCCCTCTCCTCCAACAGCAAGTGGCCGACGCGCTCGACTCGTTT
GATTTGAAGGAAACGACGCCGGTGATTGCCACTAGTGCAGTCAATAGGCT
GGGCCGGGATGAGGTGTGGAGGTACCTCCGTCTGGCTGTCATCAAGGAGG
GGAATTAAGGAGGGAGGAGGGAACAAGAGGACATTCAATTTCCATTTTTT
CTACAAGGCGCGGAGCCGTTGTTGCGGGAAAGGTTGCCATTAATTCTCCG
AACATCGCATTGATTGACAAATTGATTCCCTTTCCGCAAAAGAAGGTGGG
ATGGCAAGACAAAATATGGCGTTACTCTGACTCAAAAAAGAACTAAGGAC
AATGTCATGTACATGTAAGGTTTGATTTAAGCT

protein sequence of NO14G00170.4

>NO14G00170.4-protein ID=NO14G00170.4-protein|Name=NO14G00170.4|organism=Nannochloropsis oceanica|type=polypeptide|length=715bp
MPPTSSSSPRRRCSSLFGLWALRTLYAVGRAGVGAFQCRGMSGIGIGGIK
GTRGGGQMEQQYCHHQHHRALSPAVLSASLWSTSSSSPLVLHLPSFSSSC
SPRPPPWRVAALFRHSGRSLVLVRSAGGGGHGHADSERRKEDEEKEGLLG
SVDKAGADLAALELDHDMFKESSKTRRRELREANRRAKEREMKCKEKRLR
NSGHSSSSGNAHNEKGKERAALQRQAGPPTATNEEEALLQAKVYRKVEAP
KRLIELATLAMAGDFLTPQVLKVTVRAEMDMRRPDLASELVQSALSHWRE
QVLLLPAREEGGEGGRGEAGKKGGKKGLPACYAEALKWLCRLGSSESGVH
SSTGGREGGREGGREGGGAETMKKAEVRAREEEETGRREGSMALALETLT
LLGVLGGGREGGREGGVGPLGLSLEEVGGLLTTVGKAYLKRGDTVGATRM
VGGMVGWGVKPMMEVCNDLLRQQGKQGRVEGMFHTLDLMREGGLHPDADS
YNHVGNTLVKSVEFVAGAVSMDTLPGRVLPEVCFIGRSNVGKSSLLNMVC
NRKDLAYVSKRPGKTQQFNYFLVNDKTKNSFYMVDIPGIGYAKVPLTEKS
KWAAFFEAYLARRPSLRVVFHLIDARHGPLAQDVATMQAMRTSLRPGVQY
VVILTKADKKDGKVSPLLQQQVADALDSFDLKETTPVIATSAVNRLGRDE
VWRYLRLAVIKEGN*

mRNA from alignment at chr14:64739..69902-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G00170.4 ID=NO14G00170.4|Name=NO14G00170.4|organism=Nannochloropsis oceanica|type=mRNA|length=5164bp|location=Sequence derived from alignment at chr14:64739..69902- (Nannochloropsis oceanica)
CTTCTTTCCTATCGTTGACCTATGCCTTTCCCCCTTCTTCACTCATTTCC
TTGACGACCGGCGGCTTTCTCTTCTCCTCATCTCCTTCTGTGATCTCCCC
GCTTCGCTTTTCTCCCTCATTCTCCTCCTTCTTTTCAGCGATTTCGACTT
TTGCGGCCGCCTTGACCTCCTCCGCTTCGACCAAGGCCTGGAATTCGGCA
CGGCCTTCGTCCGTCCGCAAGTGCTGGAATAACAAGGTCATCAGGTCGCT
CAAGTCTACTTCCTCCCCGCTCTCATCTCCTACTCCGACTTGCCCCGCCT
CCTCTAGTCCTGCCGTTGCGTCTGACAAAGAATTGGTTGGTGATCCTGTT
GTACCCTTGGCTGTCGGCTCGGCTGTGGCCTCTCCTCGTTCGATGGACGT
GATGTGCGGCTCACCATCGCCGCCTGCTGTGAGAGGGGCAGGAGAAGGAA
GAAGAAGACTGCTGGTATCGCTGGTGCTGGCTGTGGTGTTGGTAGAACTC
ATGGCGGCTTGGGGCGGCTTGCTTGGTCTGTATGGGGAAGGCGGCGGAAA
AAGAAGGGGAGTGTGTGTGTGTCGATGCCGGTGTTTTCCAAGGTCAACAC
AGGAAGTGCCGACGGCCGGAGTAGCGACTGAGCATGGCACCAGATAGTGG
CATCTTTAGCCAAAGCTCCAGACAGCGTGGGGGCAGCCCTGCTTTGGTAC
AGTGGTAGTCCTATTGGTTTGTGGTAGCAGGGCTACTCCTTTACATTAAG
AGACAGACCAATTTTAAGGGACTCGCTTGGACATTTACTGTTGATACAGG
TAATTAAAGCGCATATCATGCACGCTTGCACGTCATGTACATCCACACAC
CCCGCACTCACGTTTCCATCTTTAGTTTCGTTATACTTCCTTGGTGTCTT
CTCCTTTCTTTTTTCTCTCTTCACTTTCAACGTCAACTATCAACGACGAA
CCCTCGTTTCACCCATCCAGCCAGCTACGACGTGGCTTACGCATACCTAC
CCTTTCTCCTCACACGCATAGATAAATGCATATTTGCTAAAACAACTACA
GAACAAGAGCGGTAAGCAAGGACGAGCTGAGGACGAAGACTACGACAAGG
AAATCTCCTCCCTATGCCTCCCACCAGCAGCAGCAGCCCCAGACGGCGTT
GCTCATCCCTTTTTGGCCTGTGGGCGCTTCGAACCTTGTACGCAGTAGGT
CGTGCTGGCGTCGGTGCCTTTCAGTGTCGGGGTATGAGCGGCATCGGGAT
AGGAGGGATAAAGGGAACAAGAGGAGGAGGGCAGATGGAGCAACAGTACT
GCCATCACCAGCATCATCGAGGTGAATGTGCCTGCCTGCTTGCCTGAAAG
ATTGTACGATGGATACGTGGGCGTATGGGGATGGACAGTCCATCTGCATG
CAAAATCAGCATGTAAACACTGTGTTCCCTTCTCTCCTCTTCCTATCCGT
CCAATTCTACCTCACCCCTTTCCCTCTCCCTTTCCTCCCTCCCTCTCTCC
CTCCCTCCCTACCCAAAGCTTTGTCACCAGCCGTGCTATCCGCATCGCTG
TGGTCGACGTCTTCCTCCTCTCCTCTAGTCCTTCACCTCCCCTCCTTCAG
CTCATCCTGCTCTCCTCGCCCTCCACCATGGCGAGTAGCCGCCCTCTTCA
GGCATAGCGGCAGAAGCCTTGTGCTGGTACGAAGTGCAGGTGGAGGAGGC
CATGGTCATGCAGACAGCGAGCGGAGGAAGGAGGACGAAGAGAAGGAAGG
GCTCCTGGGAAGCGTGGACAAAGCTGGGGCGGACTTGGCAGCACTGGAGT
TAGACCATGACATGTTCAAGGTAAAGGAGGAAGGGAGGAGGGTAGGTAAA
GGGTGAGAGGGAGGAAGGGGGGAAAAGGATAAATGAAGAGATGGAGGGAG
CGCAAGTGGGCAAACATCTGCATGGCCAAGAATACGGCTTAATCTCTCTT
ACCCTTCCACACAGAATATAACCTAGTCTTTCTGTGTGTCCATGGGCTTT
CCGTAATCTTACTTTACCCCCCTCCCTCCCTCCCTCCGACATGCCCAGGA
ATCCTCCAAGACCCGCCGTCGAGAATTGCGCGAAGCCAATCGTCGGGCAA
AAGAGCGCGAAATGAAATGTAAGGAGAAAAGGCTCCGCAACAGCGGTCAC
AGCAGCAGCAGCGGCAACGCCCACAACGAGAAGGGAAAAGAGCGCGCAGC
ACTGCAGCGGCAGGCGGGTCCACCCACAGCGACAAACGAGGAAGAGGCCC
TGCTTCAGGCTAAAGTCTATCGAAAGGTATGATGATATACGCACGTTTAG
ATACAGAGATAAATGCATTGTCTGTGAGCCGGAGTCTCCTCCCCACCCCT
TACCCCCGTCCGCCTTCCTTCTGGTTCCCGGCATGCTGCTCCTTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGTGGAG
GCCCCCAAGCGCCTGATCGAATTAGCCACACTGGCCATGGCTGGCGACTT
CCTCACACCGCAAGTCCTCAAGGTACGCCCTCCCTCCCTCCCTCCCTCCC
TTCCTCCCTCCTCCCACGAGTCGAGTCACGCCCTCCCTCCTTCCCTCCCT
CTCCCCTCCCCTCGCTCTCTGACAATGCATGCGACCCATCGGAATGTCAT
CCCTCCCTCCCTTCCCTCAACCCTCTCCCTCCCTCCCTTCCTCCCTCCCT
CAGGTGACTGTCCGGGCCGAGATGGACATGCGACGACCTGACCTAGCGTC
CGAACTCGTGCAAAGCGCCCTCAGCCACTGGCGAGAGCAAGTGCTGCTCC
TGCCAGCAAGGGAGGAAGGGGGGGAGGGAGGGCGAGGGGAGGCAGGGAAG
AAAGGAGGGAAGAAGGGGCTCCCGGCGTGCTATGCGGAAGCATTGAAGTG
GCTGTGTCGACTCGGATCCAGCGAGTCCGGGGTCCACAGCTCGACGGGAG
GGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGAGGGGGGGCAGAGACC
ATGAAAAAGGCCGAGGTGCGAGCAAGGGAGGAGGAGGAGACGGGACGGAG
GGAGGGAAGCATGGCCCTCGCTCTCGAGACCTTGACGCTGCTCGGCGTTT
TGGGGGGAGGGCGGGAGGGCGGGAGGGAGGGAGGGGTGGGGCCGTTGGGC
CTGTCGTTGGAGGAGGTGGGCGGGCTCTTGACGACGGTGGGAAAGGCGTA
TCTGAAGAGGGGAGACACGGTGGGCGCAACTCGGATGGTGGGGGGGATGG
TAGGATGGGGGGTGAAGCCGATGATGGAGGTGTGCAACGACCTCTTGCGG
CAGCAGGGGAAGCAGGGGCGGGTGGAGGGAATGTTTCACACGCTGGACCT
GATGAGGGAGGGCGGGTTGCACCCGGACGCCGACTCGTACAACCACGTGG
GGAATACTCTTGTTAAGTCCGTGGAATTCGTGGCCGGGGCGGTGAGCATG
GACACGCTGCCGGGGAGGGTATTGCCCGAGGTAGGGAGTGAGGGCGGGGG
GGGGGAGGGGGGAGCGTCTCGTTCAATCAGTCTTATATTCTATCCTTGCT
TCAATTCCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGTCTGCTTC
ATCGGCCGGTCCAATGTCGGAAAGTCCAGCCTCTTGAACATGGTACGTCC
GTCATCAGCACCACAACCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCC
CTCCCTCCCTCCCTTCCTTCCTTCCTCCCTCTCTTCCTTCCTTCCTTCCT
CCCTCCCTTCCTCTTTCTCTTCCTTCCTTCCTCCCTCTCTTCCTTCCTCC
CTCCCTCCCTTCCTTCCTCCCTCTTTTCCTCCCTCCCTTCCTCCCTCTCT
TCCATCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTTGCCCCCTCTCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCTTCCTCT
CTCTCTCTCCCTTCCTTCCTCTCTCATTCCCTCCCTCTCTTCCTTCCCTT
CCTTTCCCCCTCATTGCTTCTCTTTCTTTCTTCCTTCCTCCCTTTCTCCC
TTCCTCCCTTCCTCCGTCCCTCCCTCCCTCCCTTCCATCCCCCCCTCCCT
AGGTGTGCAACCGCAAAGACCTCGCCTACGTCTCTAAGCGCCCGGGTAAG
ACCCAGCAGTTTAATTACTTCCTCGTGAACGACAAGACCAAAAACAGCTT
CTACATGGTCGATATCCCCGGCATTGGTTATGCAAAGGTAAGTGATGAGG
GGGGAGGCGAGGGAGGGAGGGAGGGAGGGAGAGAAGGAGAAAAAGCCCTT
AACCTCCACTACATGCACCTGTCTCCGGTCACTCTCCATTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCCCCTC
CTCTAGGTCCCCCTTACCGAGAAGAGCAAGTGGGCTGCCTTCTTCGAGGC
CTACCTCGCCCGCCGTCCCTCCCTCCGTGTCGTTTTCCACCTCATCGATG
CCCGCCACGGCCCCCTCGCTCAGGATGTGGCCACTATGCAAGCCATGCGA
ACCTCTCTCCGACCAGGTACAAGCACTCCTTCCCTCCCTCCCTCCTGCCC
TCCATGACTGCCTCGCGTCTGGCCCCGAGTCGAATTGCTTCCATCGATTT
CCTTCCCTTACAACTCACCATGAGCCCACAGCACGAGCCACCCCCTCCCT
CCTCTTCTCTTTCCTTCCCTCCCTCTCTTACAGGCGTGCAGTACGTGGTC
ATCCTGACCAAGGCCGACAAGAAGGACGGTAAGGTCTCCCCTCTCCTCCA
ACAGCAAGTGGCCGACGCGCTCGACTCGTTTGATTTGAAGGAAACGACGC
CGGTGATTGCCACTAGTGCAGTCAATAGGCTGGGCCGGGATGAGGTGTGG
AGGTACCTCCGTCTGGCTGTCATCAAGGAGGGGAATTAAGGAGGGAGGAG
GGAACAAGAGGACATTCAATTTCCATTTTTTCTACAAGGCGCGGAGCCGT
TGTTGCGGGAAAGGTTGCCATTAATTCTCCGAACATCGCATTGATTGACA
AATTGATTCCCTTTCCGCAAAAGAAGGTGGGATGGCAAGACAAAATATGG
CGTTACTCTGACTCAAAAAAGAACTAAGGACAATGTCATGTACATGTAAG
GTTTGATTTAAGCT

Coding sequence (CDS) from alignment at chr14:64739..69902-

>NO14G00170.4 ID=NO14G00170.4|Name=NO14G00170.4|organism=Nannochloropsis oceanica|type=CDS|length=2145bp|location=Sequence derived from alignment at chr14:64739..69902- (Nannochloropsis oceanica)
ATGCCTCCCACCAGCAGCAGCAGCCCCAGACGGCGTTGCTCATCCCTTTT
TGGCCTGTGGGCGCTTCGAACCTTGTACGCAGTAGGTCGTGCTGGCGTCG
GTGCCTTTCAGTGTCGGGGTATGAGCGGCATCGGGATAGGAGGGATAAAG
GGAACAAGAGGAGGAGGGCAGATGGAGCAACAGTACTGCCATCACCAGCA
TCATCGAGCTTTGTCACCAGCCGTGCTATCCGCATCGCTGTGGTCGACGT
CTTCCTCCTCTCCTCTAGTCCTTCACCTCCCCTCCTTCAGCTCATCCTGC
TCTCCTCGCCCTCCACCATGGCGAGTAGCCGCCCTCTTCAGGCATAGCGG
CAGAAGCCTTGTGCTGGTACGAAGTGCAGGTGGAGGAGGCCATGGTCATG
CAGACAGCGAGCGGAGGAAGGAGGACGAAGAGAAGGAAGGGCTCCTGGGA
AGCGTGGACAAAGCTGGGGCGGACTTGGCAGCACTGGAGTTAGACCATGA
CATGTTCAAGGAATCCTCCAAGACCCGCCGTCGAGAATTGCGCGAAGCCA
ATCGTCGGGCAAAAGAGCGCGAAATGAAATGTAAGGAGAAAAGGCTCCGC
AACAGCGGTCACAGCAGCAGCAGCGGCAACGCCCACAACGAGAAGGGAAA
AGAGCGCGCAGCACTGCAGCGGCAGGCGGGTCCACCCACAGCGACAAACG
AGGAAGAGGCCCTGCTTCAGGCTAAAGTCTATCGAAAGGTGGAGGCCCCC
AAGCGCCTGATCGAATTAGCCACACTGGCCATGGCTGGCGACTTCCTCAC
ACCGCAAGTCCTCAAGGTGACTGTCCGGGCCGAGATGGACATGCGACGAC
CTGACCTAGCGTCCGAACTCGTGCAAAGCGCCCTCAGCCACTGGCGAGAG
CAAGTGCTGCTCCTGCCAGCAAGGGAGGAAGGGGGGGAGGGAGGGCGAGG
GGAGGCAGGGAAGAAAGGAGGGAAGAAGGGGCTCCCGGCGTGCTATGCGG
AAGCATTGAAGTGGCTGTGTCGACTCGGATCCAGCGAGTCCGGGGTCCAC
AGCTCGACGGGAGGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGAGG
GGGGGCAGAGACCATGAAAAAGGCCGAGGTGCGAGCAAGGGAGGAGGAGG
AGACGGGACGGAGGGAGGGAAGCATGGCCCTCGCTCTCGAGACCTTGACG
CTGCTCGGCGTTTTGGGGGGAGGGCGGGAGGGCGGGAGGGAGGGAGGGGT
GGGGCCGTTGGGCCTGTCGTTGGAGGAGGTGGGCGGGCTCTTGACGACGG
TGGGAAAGGCGTATCTGAAGAGGGGAGACACGGTGGGCGCAACTCGGATG
GTGGGGGGGATGGTAGGATGGGGGGTGAAGCCGATGATGGAGGTGTGCAA
CGACCTCTTGCGGCAGCAGGGGAAGCAGGGGCGGGTGGAGGGAATGTTTC
ACACGCTGGACCTGATGAGGGAGGGCGGGTTGCACCCGGACGCCGACTCG
TACAACCACGTGGGGAATACTCTTGTTAAGTCCGTGGAATTCGTGGCCGG
GGCGGTGAGCATGGACACGCTGCCGGGGAGGGTATTGCCCGAGGTCTGCT
TCATCGGCCGGTCCAATGTCGGAAAGTCCAGCCTCTTGAACATGGTGTGC
AACCGCAAAGACCTCGCCTACGTCTCTAAGCGCCCGGGTAAGACCCAGCA
GTTTAATTACTTCCTCGTGAACGACAAGACCAAAAACAGCTTCTACATGG
TCGATATCCCCGGCATTGGTTATGCAAAGGTCCCCCTTACCGAGAAGAGC
AAGTGGGCTGCCTTCTTCGAGGCCTACCTCGCCCGCCGTCCCTCCCTCCG
TGTCGTTTTCCACCTCATCGATGCCCGCCACGGCCCCCTCGCTCAGGATG
TGGCCACTATGCAAGCCATGCGAACCTCTCTCCGACCAGGCGTGCAGTAC
GTGGTCATCCTGACCAAGGCCGACAAGAAGGACGGTAAGGTCTCCCCTCT
CCTCCAACAGCAAGTGGCCGACGCGCTCGACTCGTTTGATTTGAAGGAAA
CGACGCCGGTGATTGCCACTAGTGCAGTCAATAGGCTGGGCCGGGATGAG
GTGTGGAGGTACCTCCGTCTGGCTGTCATCAAGGAGGGGAATTAA

Synonyms

Publications