NO14G00150, NO14G00150 (gene) Nannochloropsis oceanica

Overview
NameNO14G00150
Unique NameNO14G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5303
Alignment locationchr14:51218..56520 +

Link to JBrowse

Properties
Property NameValue
DescriptionWD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:51218..56520 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005398Tubby_N
IPR036285PRP4-like_sf
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR027106Prp4
IPR014906PRP4-like
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_009839506.1 (hypothetical protein H257_13623 [Aphanomyces astaci] >ETV70843.1 hypothetical protein H257_13623 [Aphanomyces astaci])

HSP 1 Score: 179.5 bits (454), Expect = 2.700e-41
Identity = 130/426 (30.52%), Postives = 193/426 (45.31%), Query Frame = 0 
Query:    1 MGDQGQPKHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYT-AGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR 426
            M DQ Q   I+FG +  ++   +EA            +++A +RAGNINI+ +   +V+EL+ +SR AQ++ A LLR LE EKR R++ VPT+P +VI  LR  G P+ LFGE   DRR RLR  L+++ VDG L                                                                              + +LFY      +L  AR+ +  +S+    ARL             +A  D +    +      Y   + + +N SQL D RPL+AV  SP A  LATG+W+ ++K+WD K  +L  +    GH +R+ G+AW       H   T    + SSL + S S DGTA+LW+    Q++  + +   +GH +RL   AFHP G ++ T S+D+TWR
Sbjct:    1 MADQRQ--GIYFGEISAQQSPSVEA-----------NSVEAGIRAGNINISSSTDREVLELSASSRNAQEKHAELLRSLETEKRSRAVNVPTRPEEVIRQLRSLGHPITLFGERPEDRRARLRTVLSSLAVDGVL------------------------------------------------------PQAVSRAQDISSSVGYEKEKKVPLEDQLFYVPVKSNDLKHARQALFNYSMVRTNARLQH----------ERAQQDSSVFELDAHAADLYRTSQHIAVNASQLADVRPLSAVRFSPDASMLATGSWSSSVKLWDSKTCAL--MHTFHGHTDRITGIAW-------HPTATSAASTSSSLLVGSASADGTAKLWN----QQDTKQPVVTLKGHQSRLGQLAFHPMGAHVLTASYDHTWR 336
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: POM61736.1 (U4/U6 small nuclear ribonucleoprotein Prp4, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 176.4 bits (446), Expect = 2.300e-40
Identity = 129/415 (31.08%), Postives = 196/415 (47.23%), Query Frame = 0 
Query:    5 GQPKHIHFGSLEEKEKARLEA-IKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTT 419
            G+ K I+FG+++      + + ++ + +S   ++ ++AA+RAGN+N+++  +T+V+EL+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E +++ R  AA          ARLK  R     R+  A+  A   ++     Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +KVWD    S +E+   RGH +RV G+AW P     +   +   D   S+ L S S DGTARLWS         + L V +GH ARL   AFHP G Y+GTT
Sbjct:    2 GERKGIYFGAIDASAGDMVPSNVRNSSSSGRMASNLEAAIRAGNVNVSDNVETEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------EETGFVHQVLADIQKQEVGTGAGESGAATREERRAGRYTKPQEDQLFYVPIKNEKLKSAR--AAIFAHTTTVVGARLKRER---QERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWD--ASSANEVKVFRGHEDRVTGVAWHP-----NNVFSEMTDGADSVCLCSGSADGTARLWSAA-----RNEPLAVLQGHKARLGKVAFHPLGNYVGTT 361
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_009526443.1 (hypothetical protein PHYSODRAFT_314758 [Phytophthora sojae] >EGZ17385.1 hypothetical protein PHYSODRAFT_314758 [Phytophthora sojae])

HSP 1 Score: 168.7 bits (426), Expect = 4.800e-38
Identity = 125/416 (30.05%), Postives = 189/416 (45.43%), Query Frame = 0 
Query:    5 GQPKHIHFGSLEEKEKARL-EAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPE-LVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTT 419
            G+ K I+FG+++      +  +++G       ++ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     + L  AR  + A +     ARL R +        ++  A+  A   +      Y+   R+    SQ GD RPLA+V  S     +ATG+W+  +KVWD    +  E+   RGH +RV  +AW P         +   D   S+ L S S DGTARLWS         + L V  GH ARL   AFHP G Y+GTT
Sbjct:    2 GERKGIYFGAIDASAGDMVPSSVRGTSGGGRMASNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------EETGFVHQVLADIQKQDGGAGAPAEGTAAGDEGAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRER------QEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDANNAA--EVKVFRGHEDRVSAVAWHP-----SNTFSEMTDGADSVCLCSGSADGTARLWSAA-----RSEPLAVLRGHKARLGKVAFHPLGNYVGTT 361
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: ETK85519.1 (hypothetical protein L915_09703, partial [Phytophthora parasitica])

HSP 1 Score: 168.3 bits (425), Expect = 6.300e-38
Identity = 130/418 (31.10%), Postives = 192/418 (45.93%), Query Frame = 0 
Query:    2 GDQGQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G  G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:   25 GKMGERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 380
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: ETL38945.1 (hypothetical protein L916_09609, partial [Phytophthora parasitica])

HSP 1 Score: 168.3 bits (425), Expect = 6.300e-38
Identity = 130/418 (31.10%), Postives = 192/418 (45.93%), Query Frame = 0 
Query:    2 GDQGQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G  G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:   25 GKMGERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 380
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: ETM45364.1 (hypothetical protein L914_09573, partial [Phytophthora parasitica] >ETP43446.1 hypothetical protein F442_09810, partial [Phytophthora parasitica P10297])

HSP 1 Score: 168.3 bits (425), Expect = 6.300e-38
Identity = 130/418 (31.10%), Postives = 192/418 (45.93%), Query Frame = 0 
Query:    2 GDQGQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G  G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:   25 GKMGERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 380
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: ETL92067.1 (hypothetical protein L917_09532, partial [Phytophthora parasitica])

HSP 1 Score: 167.5 bits (423), Expect = 1.100e-37
Identity = 130/418 (31.10%), Postives = 192/418 (45.93%), Query Frame = 0 
Query:    2 GDQGQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G  G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:   25 GKMGERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHYAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 380
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_008892954.1 (hypothetical protein PPTG_01410 [Phytophthora parasitica INRA-310] >ETI45553.1 hypothetical protein F443_09906 [Phytophthora parasitica P1569] >ETN21127.1 hypothetical protein PPTG_01410 [Phytophthora parasitica INRA-310] >ETO74194.1 hypothetical protein F444_10000 [Phytophthora parasitica P1976] >ETP15360.1 hypothetical protein F441_09854 [Phytophthora parasitica CJ01A1] >KUF94102.1 U4/U6 small nuclear ribonucleoprotein Prp4 [Phytophthora nicotianae])

HSP 1 Score: 166.8 bits (421), Expect = 1.800e-37
Identity = 129/415 (31.08%), Postives = 191/415 (46.02%), Query Frame = 0 
Query:    5 GQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPLA+V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:    2 GERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 354
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: KUF91483.1 (U4/U6 small nuclear ribonucleoprotein Prp4 [Phytophthora nicotianae])

HSP 1 Score: 165.2 bits (417), Expect = 5.300e-37
Identity = 128/415 (30.84%), Postives = 190/415 (45.78%), Query Frame = 0 
Query:    5 GQPKHIHFGSLEEKEKARLEAIKGNDASATG--SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGT 418
            G+ K I+FG+++      + +   N ASA G  S+ ++AA+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                 + +LFY     E ++   V A      A     RLK  R     ++   +  A   +      Y+   ++    SQ GD RPL +V  S     +ATG+W+  +K+WD    + +E+   RGH +RV G+AW P       A +   D   S+ L S S DGTARLWS    +      L V +GH ARL   AFHP G YLGT
Sbjct:    2 GERKGIYFGAIDASAGDMVPSSVRN-ASANGHMSSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEA--------------------------------------------EETGFVHEVLADIQRQDAGAGAAGAEGAARKATKPQEDQLFYVPIKNEALKG--VRATIFAHTASVVGTRLKRER---QEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLGSVRYSADGAHVATGSWSSLVKIWD--ATNANEVKVFRGHEDRVTGVAWHPT-----SAFSEMTDGADSVCLCSGSADGTARLWSAARNES-----LAVLQGHKARLGKVAFHPLGNYLGT 354
[Close]
BLAST of NO14G00150 vs. NCBI_GenBank
Match: PSC69723.1 (U4 U6 small nuclear ribonucleo PRP4 [Micractinium conductrix])

HSP 1 Score: 164.5 bits (415), Expect = 9.000e-37
Identity = 131/396 (33.08%), Postives = 182/396 (45.96%), Query Frame = 0 
Query:   36 SAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADP-----AALAEEERVGRAYSLMRRLGINQ-SQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR 426
            +AA+ A V AGNI + +A   +VM+L + S E   +Q  L++++E  ++ ++ VVPT   +V   LR+ G+P+ LFGE   +RR+RLR  LA ++ D                                                                                   E+FYT G P+L EAR  +A +SL+ A  RLA          AR+A  DP     AA +E ER  +A +       NQ S+LGD+RP+A    SP    LATGAW+ TLK+W +   SL + +    H ERV G+AW P      EA T       ++ LA+ + D TA+LWS       EGK+LR   GH+ RL   AFHP GR+LGT S+D TWR
Sbjct:   28 AAAVAAGVAAGNI-MRQAVDAEVMDLPEASAEHMRKQQELMKEIELRRKAKATVVPTSDAEVRRMLRQLGEPITLFGEREMERRDRLRRILALMDED---------------------------------------------------------QAVAALGPPTDQEMAEAEQAVAVPSSEVFYTEGPPDLAEARADIAQWSLRRAAVRLA---------AARRALEDPDENSAAAGSEAERQLKAMT-------NQASELGDERPIAGCAFSPDGTQLATGAWSGTLKLWSMP--SLTKRLTVNAHAERVTGVAWHP------EASTTG-RMEEAVTLATGATDATAKLWS------GEGKLLRTLTGHSDRLGRVAFHPMGRHLGTASFDQTWR 334
The following BLAST results are available for this feature:
BLAST of NO14G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009839506.12.700e-4130.52hypothetical protein H257_13623 [Aphanomyces astac... [more]
POM61736.12.300e-4031.08U4/U6 small nuclear ribonucleoprotein Prp4, partia... [more]
XP_009526443.14.800e-3830.05hypothetical protein PHYSODRAFT_314758 [Phytophtho... [more]
ETK85519.16.300e-3831.10hypothetical protein L915_09703, partial [Phytopht... [more]
ETL38945.16.300e-3831.10hypothetical protein L916_09609, partial [Phytopht... [more]
ETM45364.16.300e-3831.10hypothetical protein L914_09573, partial [Phytopht... [more]
ETL92067.11.100e-3731.10hypothetical protein L917_09532, partial [Phytopht... [more]
XP_008892954.11.800e-3731.08hypothetical protein PPTG_01410 [Phytophthora para... [more]
KUF91483.15.300e-3730.84U4/U6 small nuclear ribonucleoprotein Prp4 [Phytop... [more]
PSC69723.19.000e-3733.08U4 U6 small nuclear ribonucleo PRP4 [Micractinium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL137nonsL137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006196NSK006196Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00150.1NO14G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00150.2NO14G00150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101037g1gene5700Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00150.1NO14G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00150.2NO14G00150.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00150 ID=NO14G00150|Name=NO14G00150|organism=Nannochloropsis oceanica|type=gene|length=5303bp
ACAGGGTGTGCAGGAAGGCAAACGAGCGATTTCCTTGCTCGGTGCAGCGA
CACGATGGGCGACCAAGGACAACCAAAGCACATCCACTTTGGTTCCTTGG
AGGAAAAGGAGAAGGCCCGCCTTGAGgtacagtggtctatcctcccctct
tccctatccttcctcccccctcccccgccccccgtcccctcctcgcgcac
cctcccttgcctcaagcacaaacgccttgtagactcgtgtcgcaacgagc
agcatgatctctttcgtactgtagctatcgaatcccatcctcccccgtga
ccgttctcaccgctactacccacccaccttttccctctccctctttcccc
ccctccttccctccgttcctcccaacagGCCATCAAAGGCAACGATGCCT
CGGCCACGGGCAGCGCCGCCATCCAAGCGGCCGTACGAGCTGGCAACATT
AACATTGCCGAGGCGGGAAAGACACAGgtatgaggtgggggaagagggag
agcaataggatgtcctgaggaagaggatgggaagggcggcgtagcgattt
ctgaacgaagacgtaaggacaagcggatggacagatgcaaaagcgcggag
gatacctgtgttgatcttctactccctccttcatttctccttctccctcg
ccctcttctagGTGATGGAACTGACAGACACGAGCCGAGAAGCTCAAGAC
AGGCAAGCGCTGCTCCTCCGGAAGCTGGAGGCCGAGAAGAGAAAGCGAAG
CCTAGTAGTGCCCACCAAGCCGACCGACgtacgtacggagagaaggaggg
aaggagggaaggagggaaggaggaagggaacggcaacaagtcgtcgaagc
acgggtaatgcacatgtccctctatggtatggagatggttgtagccgaat
tggacttttaccggtcacccctggccccctccctcccttcctccctccct
ttttcccatcctctccctgctcccacctagGTCATCGACTGGCTCCGGAA
GCACGGGCAGCCGGTGGCGCTGTTTGGGGAGACTGTGGCCGACAGGCGCG
AACGTTTGCGGGAGTACCTGGCCGCGgtgaggagggagggagggaggggg
ggcgactatcgcagggatggtcagcctggaggttcagatgaccagacaac
cgggagtttcacaagccttctccttcctcctttcctccctccgtccctcc
ctccctccctccctccctgcagGTGGAAGTGGACGGCTATCTGGCGGCCG
CTGCCCCACCAGGAGCAGCAGCACCAGCAGCACCAACAACAGCACCAGCA
GCAGCAACCGCAGCAGCAGTAGGGAAAGCAGGAGGTGAAGGGCTGCTGGG
TGCTGCCCCGCCGTCCGCCCTGGCTATCGCCTCGGTTCCTCTCCCAAGCA
AGCAGCAGCAACAGCAGGAGGAGAGAATGGAGGAGCAGAAAGAGGGGGAG
GGGGAGGAGGAGGGAAGGGCAGAGAAGAAGCAGGAGgttcgtatgcccgt
ttctttaactgctcttttcctacccctgctcttttcctatttctgctctt
ttcctggccctgctgcaccagctgatcgacttgttgcttcactttttgaa
ccttgctcccctcttcacgctccttcttcccttcttccctacctcccttc
ctccctcctctcgacccacccgaccaaccctccttccttcttctctccct
ccctccctccctccctccctcccttccagCTCTTCTACACGGCGGGGTTG
CCCGAGCTGGTGGAGGCCAGGAGAGTAATGGCCGCCTTCTCCCTACAGgt
aggtagggagggaggcagggaggcagggatggggggggaaagaactcaac
cataggcgggaagttgttcacgtcttgctaaatgtcgtcgtccttattcc
cattccctccctccctccctccctccctccctccctccctccctcagGCT
GCCCCTGCTCGTCTGGCGCGCCTCAAGGGCCGGCGATTGCTTCTCACCGC
CCGAAAAGCAGACGCGGATCCAGCCGCCCTAGCCGAGGAGGAACGGGTGG
GAAGAGCgtacgtagggagggaggatatggaggaatgataggagggaggg
agggagggagggagggagggagggagggagagagggggaatgatgatgga
tggctgtcttttttcctgggcgcgtgtgcctcttagacacctgtctgtgc
ctactttatttctgacgtctctcggtttctttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttctttctgtcgtctttttgttccttg
acatctttcttgcttttctctccctttctctctctctctctctctctttc
tctctctctctctctctctctctctctctctctccaggccagagctcacc
atccccttccctccctcccccctccctccctccctccctccctccctccc
tcccccccagCTACTCGCTCATGCGCCGGCTGGGCATCAACCAGTCCCAG
CTCGGCGACGACCGGCCTCTGGCTGCTGTCGGGGTCTCGCCTTGTGCGGG
CTTTCTGGCCACAGgtacggagggagggccggagggacggagggacggag
agaaggtggttgaggccttaggtgggtgcacttcacatcatttcaatcgg
catttttccctccctacctccctccctccttcccagGTGCCTGGACTCAC
ACCCTCAAGGTGTGGGATCTAAAGGGCGGGAGTCTTGACGAGTTGGTGTG
CTGCCGCGGGCACATGGAGCGAGTGTGCGGCCTGGCCTGGATGCCGCTGC
AGgtagggagggtgggaaggagggagggaagagaaggagggagagaaggg
attgttggtttggtggttgacgatccagaatgtcatctcatcaatttggc
tccagattgaccacacttgattctttctctctctcacacacacacacact
catgtatgtatgtatgtgcatttagGGCGGTGGCCATGAGGCCGAGACGA
TGGAGGTCGACTCTCCGTCCTCCCTTAAGCTGGCCTCCTGCTCTGTAGAC
GGGACTGCGCGgtaggtctctggaggagatggtgaaggaggcagggaggg
aaaggaagaaacacacgtatgagccctcatctcgactcccgatggtatgc
acgcgcatttacgttctcttccctcctcaacttcttcctccttccctccc
tttccccctccctccttcctccttccctctctcctcgattccgcagGCTG
TGGTCCGTCTGCCCCGGACAGGAGGAGGAAGGGAAGGTCCTCCGGGTATT
TGAGGGTCACGCCGCTCGCCTTGCCTCATGTGCCTTCCATCCCTCCGGGC
GCTACTTGGGCACCACCAGCTGGGACTACACCTGGAGgtgggtttgtcac
ggcgctccttccctctcgccctcccccgatctctacctgactgcctgcta
ccccatctctcgtccgcctttagggtcgggcccgagggagggtgcagtgc
atcgtgtcgtaatcccctacatactcacggtgttcttctttttcttttat
cccccgtgtcctccctccctcccttccccccttgtccctctcccagGCTC
TGGGACGTGGAGACGGGCCAAGAACTGCTTCTGCAAGACGGGCACTATAA
GGAGACCCACGCCATCGCCTTCCAGgtagggagggagggaaggagggggg
agggggttcattgggctggttggacgatccagatagttggcatcggcacc
ccctgcttgcgacagatggacagaggtctgtcgtcatctcgtcattgatg
tccatattttctccttttcattcatgcattcgcttcatcctcgctccctc
cctcctcccctcattattcagGGGGACGGCGCCTTGGTCGTGACGGGCGA
CTACGCGGGCATCGGCCACGTCTGGGACATGCGAACGGGGAAGAGCATCT
TCCAGCTCCATgtaaggaggagtgagagtgggtcggagggaagaagagga
ggactgacggaagggaactgtggattggatgggtgctgactgaagctaca
accgtaccctcaccttcagacacaacatctttaatcacatgattaaaccc
atgttccaccaccataccaccaaacataatatagGGACACACCCAAAAGG
TCCTCTGCGCGGATTGGCATCCCAACGGgtaagtccatcttctctctctc
cgcatccctcgcttctctccatcctgcattttaccatttcatgcctctca
ccactcaccctcccaccccttctgattctaacagCTACCAATTTGCGACA
GGTTCTTCCGAGAACGTGGTCAAGATCTGGGACATGCGGAGACGAGCCAA
CATCTACACCATTCCCGCGCACAGTGCCCTGGTCGCCGCGGTCAAgtacg
tggaggggcgagaattgaatcaagggcgaggaggacacggggggaggctg
taatctttgtttttcctttctttaatgtatgactcgagctgtctaccttc
gtgtatgtctcttcaaatatggaagctgtgtgacgggtaacggcatgaga
aagcgagtcgtgagggtcactccgagcgcacgtgcgtccctggtttgttc
ccccccctcttagtcttgcgggtcgctgtcccgtgtccaagcagcagtct
tgcacaaaccctcctagaatcgccgtacacacatgcactcacactctccc
cctcccttttcaccgtgctgcctccccacagGTACGCGCCACAGGACGGA
GAGTTCCTGGCCACGGCTTCCTTCGACGGGAAAGCTAAGgtatgtggatg
gttatgcacacgtggactgtcaaagagatggttctggctggataaaactc
tttctttataaacgtctttctcctctaaagattgatatctatcagagatc
gagctgcgcttcgtttgtccttgaaaacctaagcgttggtgttgtcgcag
cctgtgggtctgtatccaacttagaggtgcatgcactaatgtaacacgtg
cgcgtcatcctctcacgtaccatcccacccacactcatacattctttccc
accctttcagGTCTGGGGCACGCGGGACTTTCGGCTGCTGAGAACGCTGG
AGGGGCATGAGGGGCGCGTCGTGGACATAGACTGGACTCCAGATGGCCGA
CGGCTGGTCACGGCGTCACATGACCGAACCTTTAAGGTGTGGGCGGACAG
CAAGGAGTTTTGAAGAAGCAACAAACAGTAAAAGCATAAACACGAAAACG
TTG
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protein sequence of NO14G00150.1

>NO14G00150.1-protein ID=NO14G00150.1-protein|Name=NO14G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MGDQGQPKHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINI
AEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDW
LRKHGQPVALFGETVADRRERLREYLAAVEVDGYLAAAAPPGAAAPAAPT
TAPAAATAAAVGKAGGEGLLGAAPPSALAIASVPLPSKQQQQQEERMEEQ
KEGEGEEEGRAEKKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKG
RRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVG
VSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQG
GGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHA
ARLASCAFHPSGRYLGTTSWDYTWRLWDVETGQELLLQDGHYKETHAIAF
QGDGALVVTGDYAGIGHVWDMRTGKSIFQLHGHTQKVLCADWHPNGYQFA
TGSSENVVKIWDMRRRANIYTIPAHSALVAAVKYAPQDGEFLATASFDGK
AKVWGTRDFRLLRTLEGHEGRVVDIDWTPDGRRLVTASHDRTFKVWADSK
EF*
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protein sequence of NO14G00150.2

>NO14G00150.2-protein ID=NO14G00150.2-protein|Name=NO14G00150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=522bp
MGDQGQPKHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINI
AEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDW
LRKHGQPVALFGETVADRRERLREYLAAVEVDGYLAAAAPPGAAAPAAPT
TAPAAATAAAVGKAGGEGLLGAAPPSALAIASVPLPSKQQQQQEERMEEQ
KEGEGEEEGRAEKKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKG
RRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVG
VSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQG
GGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHA
ARLASCAFHPSGRYLGTTSWDYTWRWVCHGAPSLSPSPDLYLTACYPISR
PPLGSGPREGAVHRVVIPYILTVFFFFFYPPCPPSLPSPLVPLPGSGTWR
RAKNCFCKTGTIRRPTPSPSR*
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Synonyms
Publications