NO14G00140, NO14G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_001450576.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK83179.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L +DG + E VD + S L+ +++ ++ SE E +PL V ++L KVIE+ ++ D +IEKPL L D V+ + ++IN + + +F II AAN+L I+ LL LS A VA +KG T EE +K F I ND T EE Sbjct: 5 VKLSTQDGVIIE-VDKEVACKSHLINTIIDDTGSEEE----IPLPNVKSSILNKVIEYCNMHRNDSPPEIEKPLRSNNLADCVEQKDADFINIPNLEELFDIILAANYLDIKSLLDLSCAKVATYIKGKTPEEIRKTFNIQNDLTQEE 147
BLAST of NO14G00140 vs. NCBI_GenBank
Match: EJY72691.1 (SCF ubiquitin ligase, SKP1 component (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L +G + E VD + S L+K M+ +S E E +PL V + +L+K+I+F + +IEKPL L D+ P Y +++N L +++F++I AAN+L I+PLL L+ A VA ++K ++ E +K F I NDFTPEE Sbjct: 104 VKLVTSEGEIVE-VDVDVASKSVLIKGMIDDSGVEEE----IPLPNVKRTILQKIIDFCTYIKDNSPPEIEKPLRSNNLNDVTTPWYADFVN-LDQEVLFELILAANYLDIKPLLELACAKVASLIKNRSIPEIRKFFNIENDFTPEE 245
BLAST of NO14G00140 vs. NCBI_GenBank
Match: EJY88765.1 (Skp1 family protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 95.5 bits (236), Expect = 2.000e-16 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L +G + E VD + S L+K M+ +S E E +PL V + +L+K+I+F + +IEKPL L D+ P Y +++N L +++F++I AAN+L I+PLL L+ A VA ++K ++ E +K F I NDFTPEE Sbjct: 4 VKLVTSEGEIVE-VDVDVASKSVLIKGMIDDSGVEEE----IPLPNVKRTILQKIIDFCTYIKDNSPPEIEKPLRSNNLNDVTTPWYADFVN-LDQEVLFELILAANYLDIKPLLELACAKVASLIKNRSIPEIRKFFNIENDFTPEE 145
BLAST of NO14G00140 vs. NCBI_GenBank
Match: CEL99351.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 94.7 bits (234), Expect = 3.500e-16 Identity = 56/148 (37.84%), Postives = 93/148 (62.84%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 + LQ++ G + E D ++ S L+K+M+ +S SE +PL V A+L++V+++ + + +P +I KPL L ++V E++N + +++F++I AAN+L I+PLL L+ A VA ++KG T EE +K F I NDFTPEE Sbjct: 8 IKLQSQQGDIYE-ADQQVACMSTLIKNMVEDSGSE----DAIPLPNVKTAILQRVLQYCEHHKENPPEEIAKPLKSTNLAEVVSEWDAEFVN-VEQEVLFELILAANYLDIKPLLDLTCAKVASMIKGKTPEEIRKQFNIVNDFTPEE 149
BLAST of NO14G00140 vs. NCBI_GenBank
Match: OEU09899.1 (Skp1-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 94.7 bits (234), Expect = 3.500e-16 Identity = 48/108 (44.44%), Postives = 74/108 (68.52%), Query Frame = 0 Query: 61 QVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 ++PL V VL+KVIEF + + A+PM +IEKPL + D+VQ Y ++++ L ++F++I AAN++ I+PLL L+ A VA ++KG T +E + F I NDF+PEE Sbjct: 73 EIPLPNVKSEVLKKVIEFCEHHLAEPMTEIEKPLKSQNMADVVQKWYADFVD-LEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPDEIRATFNITNDFSPEE 179
BLAST of NO14G00140 vs. NCBI_GenBank
Match: OQR98579.1 (S-phase kinase-associated protein 1A [Achlya hypogyna]) HSP 1 Score: 94.4 bits (233), Expect = 4.500e-16 Identity = 57/148 (38.51%), Postives = 90/148 (60.81%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L ++DG E A + S+L+K+M+ + + ED ++PL V VL KVIEF +H +PM +IEKPL + D+V +++ + ++F++I AAN++ I+ LL L+ A VA ++KG T +E ++ F I NDFTPEE Sbjct: 10 VNLVSQDGDSFELARA-VACMSELVKTMIADEQDD-EDVQEIPLPNVKSTVLSKVIEFCSHHHNNPMQEIEKPLRSSDMHDVVSEWDASFVD-IEQDLLFELILAANYMDIKSLLDLACAKVASMIKGKTPQEIRETFNITNDFTPEE 154
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_003879810.1 (protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >CBZ49775.1 protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool] >CEL64363.1 TPA: Protein F46A9.4, confirmed by transcript evidence, related [Neospora caninum Liverpool]) HSP 1 Score: 93.6 bits (231), Expect = 7.700e-16 Identity = 64/160 (40.00%), Postives = 100/160 (62.50%), Query Frame = 0 Query: 11 KEGEGAPQKFVTLQARDGALDE-PVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINA-LHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 KE G +K VTL +++G DE VD + S L+K+M+ E S+ ++ +PL V+ +L+K+IE+ + ++ +P +I KPL L ++V ++IN KI+F +I AAN+L I+PLL LS+A VA ++K T EE +++F I NDFTPEE Sbjct: 3 KERMGETRK-VTLVSQEG--DEFDVDIEVASMSALIKTMVEED-SDCQE--SIPLPNVETCILKKIIEYCEHHYNNPPEEIPKPLKSSNLAEVVSEWDFQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEE 156
BLAST of NO14G00140 vs. NCBI_GenBank
Match: EJY74361.1 (Suppressor of kinetochore protein 1 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 93.6 bits (231), Expect = 7.700e-16 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 0 Query: 19 KFVTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 K VTL +G + E V+ ++ S L+K M+ +S E E +PL V K +L K+I+F + +IEKPL L D+ P Y E++N L +++F++I AAN++ I+ LL L+ A VA ++K ++ E +K F+I NDFTPEE Sbjct: 5 KLVTL---EGEMIE-VEQEVISKSVLIKGMIDDSGVEEE----IPLPSVKKNILTKIIDFCSYIRDNAPPEIEKPLRSNNLNDVTTPWYAEFVN-LDQEMLFEVILAANYMDIKALLELACAKVASMIKNKSIPEIRKFFSIENDFTPEE 145
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_002369572.1 (suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >XP_008886921.1 suppressor of kinetochore protein 1, putative [Hammondia hammondi] >CAJ20499.1 skp1 family protein, putative [Toxoplasma gondii RH] >EPR57985.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii GT1] >EPT32444.1 suppressor of kinetochore protein 1, putative [Toxoplasma gondii ME49] >ESS29388.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii VEG] >KEP62514.1 suppressor of kinetochore protein 1, putative [Hammondia hammondi] >KFG30630.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii p89] >KFG35139.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii GAB2-2007-GAL-DOM2] >KFG49136.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii FOU] >KFG60660.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii RUB] >KFH05742.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii VAND] >KFH15625.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii MAS] >CEL71630.1 TPA: S-phase kinase-associated protein, putative [Toxoplasma gondii VEG] >KYF41405.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii ARI] >KYK68439.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii TgCatPRC2] >PIL98491.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii COUG] >PUA88338.1 putative suppressor of kinetochore protein 1 [Toxoplasma gondii TgCATBr9]) HSP 1 Score: 93.2 bits (230), Expect = 1.000e-15 Identity = 65/160 (40.62%), Postives = 98/160 (61.25%), Query Frame = 0 Query: 11 KEGEGAPQKFVTLQARDGALDE-PVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINA-LHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 KE G +K VTL +++G DE VD + S L+K+M+ E S+ ++ +PL VD +L+K+IE+ + + P +I KPL L ++V ++IN KI+F +I AAN+L I+PLL LS+A VA ++K T EE +++F I NDFTPEE Sbjct: 3 KERMGDARK-VTLVSQEG--DEFDVDIEVASMSALIKTMVEED-SDCQE--SIPLPNVDTCILKKIIEYCEHHXXXPPEEIPKPLKSSNLAEVVSEWDYQFINENSDQKILFALILAANYLNIKPLLDLSVAKVATMIKAKTPEEIRRIFNIVNDFTPEE 156
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_012198998.1 (hypothetical protein SPRG_05099 [Saprolegnia parasitica CBS 223.65] >KDO30388.1 hypothetical protein SPRG_05099 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 93.2 bits (230), Expect = 1.000e-15 Identity = 57/154 (37.01%), Postives = 95/154 (61.69%), Query Frame = 0 Query: 15 GAPQKFVTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 G+ +K + A + + +D + L S L+K L + + ED ++PL V VL+KVIEF+ +HA PM +I KP+ K K ED+V+ +++I+ + Y+++F++I AAN+L I+ LL LS A V+ ++ G T ++ ++ F I FTPEE Sbjct: 2 GSEKKVQLISAEGESFEVALD--VALMSQLVKEQLED---DCEDGQEIPLPNVKTPVLQKVIEFINYHHATPMKEIPKPI-KTKFEDVVEKWDLDFID-VPYEMIFELILAANYLDIKSLLELSCAKVSGIIFGKTPDQIRETFNIEQPFTPEE 148 The following BLAST results are available for this feature:
BLAST of NO14G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00140 ID=NO14G00140|Name=NO14G00140|organism=Nannochloropsis oceanica|type=gene|length=3244bpback to top protein sequence of NO14G00140.1 >NO14G00140.1-protein ID=NO14G00140.1-protein|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=205bpback to top Synonyms
Publications
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