NO13G03350, NO13G03350 (gene) Nannochloropsis oceanica

Overview
NameNO13G03350
Unique NameNO13G03350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4642
Alignment locationchr13:995799..1000440 -

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:995799..1000440 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58320.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 279.3 bits (713), Expect = 2.100e-71
Identity = 153/372 (41.13%), Postives = 207/372 (55.65%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +L+NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   T+ ++LD F+D  AERGL +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  I+   YGFI+    + V++GEWGG   +G KD        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNLTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEGDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 279.3 bits (713), Expect = 2.100e-71
Identity = 161/423 (38.06%), Postives = 233/423 (55.08%), Query Frame = 0
Query:   21 LGHVSSESTGALRG-GNSTTTRALAPAQCLDKATLDWTSSPNGAVLLNGKPFHIKGISWFGLEKGE-EMLHGLNKRPMGDILDF-VKSNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIVGDK-AELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSV----YEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSCIG----KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCKP 432
            L   ++  T  LRG    + T+A+     L K  L WT + N  + +NGK FH+KG+SWFGLE G+  ML GLN R + +IL F V +NFN IR+PFS K+AL      R   Y     +  L+  + L+KF++  A+  + VMLD H +   +  ELWY   YT+E  + AW+++     +H+N+FA DL+NEPHG A+WG  +  TD+N   E++   L  K P++KGL  VEG  Y+ E              E  K  PI       + RLVY+PH YGPSV    +  GY+   +FP +  + WE+ +GFI        ++GEWGG        KD V Q +  ++L +KCM++   W LNP S DTGG+LK +W+  +  K+ L D VQPHP+ + +   D   ++ G ++NP C P
Sbjct:   33 LASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGT-NKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR--GYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSIE-------------FEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYV---NFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL-WKEGDTFYLEPGEYANPKCDP 435          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58316.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58319.1 cellulase 2, partial [Pristionchus pacificus] >ADV58329.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 278.5 bits (711), Expect = 3.600e-71
Identity = 151/372 (40.59%), Postives = 207/372 (55.65%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +++NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   T+ ++LD F+D  AERGL +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G KD        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58322.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58335.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 277.7 bits (709), Expect = 6.100e-71
Identity = 150/372 (40.32%), Postives = 207/372 (55.65%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +++NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   T+ ++LD F+D  AERGL +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G +D        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58328.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 277.7 bits (709), Expect = 6.100e-71
Identity = 150/372 (40.32%), Postives = 207/372 (55.65%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +++NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   T+ ++LD F+D  AERGL +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G +D        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLEGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58313.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58324.1 cellulase 2, partial [Pristionchus pacificus] >ADV58336.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 276.2 bits (705), Expect = 1.800e-70
Identity = 150/372 (40.32%), Postives = 206/372 (55.38%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +L+NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   ++ ++LD F+D  AERG  +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G KD        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNVYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58315.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 275.8 bits (704), Expect = 2.300e-70
Identity = 150/372 (40.32%), Postives = 206/372 (55.38%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +++NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   T+ ++LD F+D  AERGL +MLD H I   G  +ELWY   Y E          F      +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G +D        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQK-------FTITHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: ADV58333.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 273.9 bits (699), Expect = 8.700e-70
Identity = 148/372 (39.78%), Postives = 205/372 (55.11%), Query Frame = 0
Query:   64 VLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +L+NG+P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   ++ ++LD F+D  AERG  +MLD H I   G  +ELWY   Y E          F +    +N+F  DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGF++    + V++GEWGG   +G KD        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:    1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNVYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFEIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFVVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 346          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: PDM75351.1 (hypothetical protein PRIPAC_42528 [Pristionchus pacificus])

HSP 1 Score: 268.1 bits (684), Expect = 4.800e-68
Identity = 147/367 (40.05%), Postives = 201/367 (54.77%), Query Frame = 0
Query:   69 KPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVK-SNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIV--GDKAELWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSC-IG-KDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLDMVQPHPTRVQYVTKDQICMDWGAFSNPNCK 431
            +P  +KGI++FG E      HG+    +   LDF+K +NFN IR+PFS++  + +  S          GL   ++ ++LD F+D  AERG  +MLD H I   G  +ELWY   Y E          F +    +N+FA DL+NEPH  ASWG S+  TD+N   ER+IN L+     + GL+ VEG +             WG  LE   Q+PI     + + R+VY+PH YGPSVY+      PDFPNNL  ++   YGFI+    + V++GEWGG   +G KD        EWLR KC+ NN +W LNP S DTGGLL+ DW T    K+NL +  QP+PT+ Q     QIC+  GAF   +C+
Sbjct:  459 QPLVLKGINYFGFETETYTPHGIWSYDLNVYLDFIKNNNFNAIRVPFSLEM-VKNNPSNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYNNEYPESQK-------FTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFLGLFFVEGIE-------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQ-AQNGQICITAGAFPEAHCQ 799          
BLAST of NO13G03350 vs. NCBI_GenBank
Match: WP_010868063.1 (endoglucanase [Pyrococcus abyssi] >CAB49854.1 Major extracellular endo-1,4-betaglucanase precursor (cellulase) [Pyrococcus abyssi GE5] >AEG76944.1 tcel4, partial [synthetic construct] >CCE70351.1 TPA: endoglucanase [Pyrococcus abyssi GE5])

HSP 1 Score: 260.0 bits (663), Expect = 1.300e-65
Identity = 137/343 (39.94%), Postives = 202/343 (58.89%), Query Frame = 0
Query:   69 KPFHIKGISWFGLEKGEEMLHGLNKRPMGDILDFVKS-NFNVIRLPFSVKFALSDQRSKRPDP----YIVGFGLEDLTSWEVLDKFMDECAERGLFVMLDQHDIVGDKAE-LWYEGVYTEEYSIKAWEVMFERYGNHYNMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLVEGTQYNNEGYEPPVPQ------WWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGPSVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSCIGKDQVVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLL 400
            KP ++ G+SWFG E  + +++GL+KR   DIL  VK   FN IRLPF  +   S +   RP P    Y +   L++LTS E+++K ++     GL+++LD H I  ++ E LWY   Y+EE  IK W  + +R+G + N+  AD++NEPHG A WG      D+  + E++   + +  P W  L  VEGTQY +      + +      +WG NL G K +P++L       ++VY+PH+YGPSVY   Y K PDFPNN+P IWE  +G+ + DL   ++IGEWGG+  G D+V Q    +WL +K + N  +W LNP S DTGG+   DW TV++ KM ++
Sbjct:   48 KPLYLHGVSWFGFELKDHVVYGLDKRNWKDILKDVKRLGFNAIRLPFCSE---SIRPDTRPSPERINYELNPDLKNLTSLEIMEKIIEYANSIGLYILLDYHRIGCEEIEPLWYTENYSEEQYIKDWIFLAKRFGKYPNVIGADIKNEPHGEAGWGTGDE-RDFRLFAEKVGREILKVAPHW--LIFVEGTQYTHVPNIDEIIEKKGWWTFWGENLMGVKDYPVRLPR----GKVVYSPHVYGPSVYMMDYFKSPDFPNNMPIIWETHFGY-LTDLNYTLVIGEWGGNYEGLDKVWQDAFVKWLIKKKIYNFFYWCLNPESGDTGGIFLDDWKTVNWEKMRVI 379          
The following BLAST results are available for this feature:
BLAST of NO13G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ADV58320.12.100e-7141.13cellulase 2, partial [Pristionchus pacificus][more]
EWM26893.12.100e-7138.06cellulase 2 [Nannochloropsis gaditana][more]
ADV58316.13.600e-7140.59cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58322.16.100e-7140.32cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58328.16.100e-7140.32cellulase 2, partial [Pristionchus pacificus][more]
ADV58313.11.800e-7040.32cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58315.12.300e-7040.32cellulase 2, partial [Pristionchus pacificus][more]
ADV58333.18.700e-7039.78cellulase 2, partial [Pristionchus pacificus][more]
PDM75351.14.800e-6840.05hypothetical protein PRIPAC_42528 [Pristionchus pa... [more]
WP_010868063.11.300e-6539.94endoglucanase [Pyrococcus abyssi] >CAB49854.1 Majo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL130nonsL130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR096ngnoR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03350.1NO13G03350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673790gene_8965Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03350.1NO13G03350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03350 ID=NO13G03350|Name=NO13G03350|organism=Nannochloropsis oceanica|type=gene|length=4642bp
ATTCGAAGGGTACATGCTGGTGCACCATCCTCCACCTTCTAAAAGTTTAT
ACTTTTCCAAAGCTCGTCACAATGCATCCATGTAACGGGGAAATTGTGAG
GCGAACAGCCAGGCACTGTTTCTTCCCTGAATCTGCTCTTTTTATGTTGG
TCCAGCACCACATACTTTCTCAGCTCAGCGATGCTATTACGGAGGTCGGG
TACTTTAGCCTCCCGAATGCAAACAGCGGCGACTACGGGCAGGGGACAAT
GCAGCCACCCACGCACGCAGTTACGAAGGTATATTTCTAGGAATATTATC
TTTCCTTGATCCCGGGCTTGCCATGACCAAGAGTCCGGTTTAATGGTCGA
CGCGAGCCAAGCCCCCCGCGCGTACGAACGCTTGCTGGATACGGCTGGCG
CTGTGCCGTCTCGCTTGATCTTTTCCGCATTCCGATCGCGTTCCAAGGCA
CCACTACGCCTGCCCAACCTCTTACTAGCTCCACTCACTGCTTCTCCTCT
TATCTTCTCTTCCTCATGACCATCTCTAAGCCCCTGCTCCCACCTCCAGA
GGACCTAAACTGTCGAGGAACAGCAAAAACCCTGCGAGCATCTGCAGGAC
GAGGCACATGTGCAAAGCGACTCACGTACCCTGTATTTTCCGCACCCCTG
TCTACACCACATGCCCATGCATGCGACTCGCGCACATCTTCTTCTTACCC
TGCCCGGCCCCTCCTCATCTCTTTCCACCCATCCCTACAGGCAAGCCGAG
GCAGCACTCACAGCTCGCCCGCCTCTTTTCCGTCTCGTCGGCCTATTGGA
GTCCGCCAGCAACAGCACCACTCTACACAGCGCTCTTCCTCCTGCCCCTC
AACCACCAACCTAATCTGCAAGCACAAAAATGGCAAGACTGTCTTCCTCC
TCCGTCCTCCTCTCAGGTCTCCTGTTGAGCGCCATCCTTCTTGGCCATGT
CTCTTCCGAGTCCACCGGCGCATTGCGAGGCGGGAACAGCACCACCACAC
GGGCCCTGGCGCCTGCGCAGgtaagatagaaggaagagagggaggaacgg
agagaggggaaggaggacaatgccgggcgggggttgaggaaagggagata
gatagatgattgtctgaaagcgggtgcgtggtgggggtggaacagctcgg
ctcgactgccacaagacctacattccttgcagcgaatgagggagggaggg
aggggcggagggtcgggactgtcgctcgcgaatcacaggagaagatgcca
tgggtgcgatgatgtgatcacagcggtttatcgtgaaaggaagggaggcc
tgcattgcctgcatcgcccaaacactatgcagcggataggacagcttcca
ctaacttccccgtcttcccttcctccccttctccctctctccctccctct
ctccctctttccatcagTGTCTGGACAAGGCCACGTTGGATTGGACTTCC
TCACCCAACGGCGCTGTACTCTTGAACGGGAAGCCTTTCCACATCAAGGg
taggtggggggagggagggaaggagaggggggagggagggcaggaaagga
gggacggagacacatttggctatatgtgtagctcgggacgctacttttaa
gacgacagcatcacaatcgtggcgcctttccccctctcttctcacctccc
tccttccttccttccttccctccctccctccctccctcgcctgcagGCAT
CTCGTGGTTCGGCCTGGAGAAGGGCGAGGAAATGCTGCACGGCCTCAACA
AGCGGCCCATGGGCGACATTCTGGACTTTGTCAAGgtatacccttcatcg
gtccctccctcccgccctccctccctccttgccatcctggctttccttct
cttgtcactctctccccctcccttcctcctcccaagctgccaaatctcac
ccctccctccctccctccctccctctctccagTCCAACTTCAATGTCATC
CGTCTTCCCTTCTCCGTCAAATTCGCGCTCTCGGACCAACGCTCCAAGAG
ACCCGACCCCTACATCGTGGGCTTCGGCCTCGAGgtaagcccgccctccc
tccctccctcccttcctccctccctccctctcaccctctagtttatcgag
acctcaacccccccctaacagtcctcaccccctccctctctccccccctc
cttccctccttgcagGACCTGACCTCCTGGGAGGTGCTTGATAAGTTCAT
GGACGAGTGCGCCGAGCGCGGCCTCTTCGTCATGCTGGACCAGCACGACA
TCGTGGGTGACAAGGCCGAGTTGTGGTATGAGgtacgtcctccctccctc
cctccctccctccctccctcccaccctccctccctctttcgatccctctc
tccctttctcgatctccttcgactctcccttcctccctctatccccccgc
cctcgacgtactcctccgcatctcacccttcctccgtccctccctcccct
cctgcccccctacctggtagGGCGTATACACGGAGGAGTACAGCATTAAG
GCCTGGGAGGTTATGTTCGAGCGTTACGGCAACCATTACAACATGTTCGC
GGCTGATCTCCGgtgcgccctccctccctccctccgtccgcatctcatcc
ttcctccctccctccctccgtcccttcctcccttttttttattcattctt
ggcaatccactcacatccctccctacctccttccctccgtccctctctca
ttcccccctccctcagCAACGAGCCGCACGGACTGGCGTCCTGGGGCGAA
TCCTCCCCCCTCACGGACTACAATCACTACTACGAGAGGCTCATCAACCG
CCTCGCCCGCAAGTTCCCGGATTGGAAGgtacgcccgctctccctccctc
cctccctccctccctccctcgaaccagaccaataaggaaacatcctcacc
ctccctcccttcctcccaccctccctcccaccctccctccctccctcccc
cctatccagGGCCTCTGGCTAGTGGAAGGCACTCAGTACAATAATGAGGG
GTATGAGCCTCCTGTGCCGCAATGGTGGGGAGgtgcgtgtcaggcggggg
aggagggagggagggagggagggagggagggagaggaagaggaaagaggt
gggagcaacacctggaccaagttgataggtttacatggcttcctcaccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccagGTAACCTGGAGGGGGCCAAGCAGTGGCCCATCAAGCTTGACACAGC
CGCCGCTGgtacgtctcccttccttcctccctcctctcctccctccgcat
cccctctattcacatcaatcccctgccctccgccctccgcccttccgccc
tccagATGCGCGCCTGGTGTACGCTCCCCACATTTATGGCCCATCGGTCT
ACGAACACGGCTACATGAAGGAGCCTGACTTTCCCAACAATCTCCCCGCC
gtacgtgccctgcctccctccctcccttcctcccccccttccttcctccc
tccctccccctcgacacaaacaccctcttatccttccttcctttctcttt
cttccacccttattgcctccctccccatcgacacacatcaccctcttgac
ctttcctccctccctccctccctccctccttcagATCTGGGAAAAAATGT
ACGGCTTTATCATTCCCGACTTGAAGAAAGGCGTCATCATCGGCGAGTGG
GGCGGCTCCTGCATCGgtacggcctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctcct
tccctgcttttccctctctctgtctctctctatcgcccaggatcgtcaca
atgacacttttctccctcatccccaccttccttcaacttcccctccctcc
ctcccgcccgccctcccccctccctccctccaagctcagcgagtggccca
agcagaaggacatggctaacatcaccgttcacccctccctcccctcctcc
ctccctccctcctccagGCAAAGACCAGGTGGTGCAGTACAAGCTCGGTG
AGTGGCTCAGGCAGAAGTGCATGGCCAATAACGTCTGGTGGGCGCTCAAT
CCGGGTTCCGACGACACGGGCGGCCTCCTCAAGgtgtgtgtcctcccccc
ctccctccctccctccctccttgatgagcgcagctcgacaccgcggaggc
ccgtcatagcacccacacccacctacccctccctccctccctccctccct
ccctccctccctccctccctccctccctcccgcagCCCGATTGGTACACA
GTGGATTACGTCAAGATGAACCTCCTCGATATGGTCCAGCCCCACCCTAC
CCGGGTGCAATACGTCACCAAAGACCAGgtaggccctccctccccccctt
cctccctccctccctccctccctctgtgcgtccagtgctcctgatctcag
ccattcaaccatcccccttcgcccccccccttccctctctccctccctcc
ctccctccctccctccctccctctcagATTTGCATGGACTGGGGCGCCTT
CAGCAACCCCAACTGCAAGCCCTAAACTGAGAGGCGCACCCA
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protein sequence of NO13G03350.1

>NO13G03350.1-protein ID=NO13G03350.1-protein|Name=NO13G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MARLSSSSVLLSGLLLSAILLGHVSSESTGALRGGNSTTTRALAPAQCLD
KATLDWTSSPNGAVLLNGKPFHIKGISWFGLEKGEEMLHGLNKRPMGDIL
DFVKSNFNVIRLPFSVKFALSDQRSKRPDPYIVGFGLEDLTSWEVLDKFM
DECAERGLFVMLDQHDIVGDKAELWYEGVYTEEYSIKAWEVMFERYGNHY
NMFAADLRNEPHGLASWGESSPLTDYNHYYERLINRLARKFPDWKGLWLV
EGTQYNNEGYEPPVPQWWGGNLEGAKQWPIKLDTAAADARLVYAPHIYGP
SVYEHGYMKEPDFPNNLPAIWEKMYGFIIPDLKKGVIIGEWGGSCIGKDQ
VVQYKLGEWLRQKCMANNVWWALNPGSDDTGGLLKPDWYTVDYVKMNLLD
MVQPHPTRVQYVTKDQICMDWGAFSNPNCKP*
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Synonyms
Publications