NO13G03330, NO13G03330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03330 vs. NCBI_GenBank
Match: ACS28523.1 (fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28524.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28525.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28526.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28527.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.]) HSP 1 Score: 94.7 bits (234), Expect = 6.800e-16 Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 189 LGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDS 368 LGLFS A Q GP+WW+SKH RHHK+C+N P+ DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S Sbjct: 1 LGLFSTLAYQGGPIWWASKHRRHHKHCDN--PH---DPHSVVQ-TNFFYSFVGWTIMKKEQSIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYTTCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELVRPS 164
BLAST of NO13G03330 vs. NCBI_GenBank
Match: ACS28520.1 (fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28521.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28522.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.]) HSP 1 Score: 94.0 bits (232), Expect = 1.200e-15 Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 189 LGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDS 368 LGLFS A Q GP+WW+SKH RHHK+C+N P+ DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S Sbjct: 1 LGLFSTLAYQGGPIWWASKHRRHHKHCDN--PH---DPHSVVQ-TNFFYSFVGWTIMKKEQSIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYATCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELVRPS 164
BLAST of NO13G03330 vs. NCBI_GenBank
Match: ACS28528.1 (fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28529.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.] >ACS28530.1 fatty acid desaturase, partial [Emiliania huxleyi virus sp.]) HSP 1 Score: 93.2 bits (230), Expect = 2.000e-15 Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 189 LGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRY-YIWDLNNVLLHINFTGMWVLITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTI-DLLAELDHVDHHLYPRKAKRDS 368 LGLFS A Q GP+WW+SKH RHHK+C++ PY DPHS + NFFY+++GWTI E+ +D FV E+ L++ +++P I Y YI +L + ITL+ N + H + S P KC A+ AR + D + E H HH++P + R S Sbjct: 1 LGLFSTLAYQGGPIWWASKHRRHHKHCDD--PY---DPHSVVQ-TNFFYSFVGWTIMKKEQPIDTEFVQKFMTFPELVLIDRFWYMIPWTIWTISYMYIGSYVTCVLFVAPMLGCRFITLLFNVEYHTPNRHSIPG------KCLALD-----TARFLGDCVGESGHARHHIHPSELVRPS 164
BLAST of NO13G03330 vs. NCBI_GenBank
Match: WP_017841650.1 (acyl-CoA desaturase [Methylomicrobium buryatense]) HSP 1 Score: 93.2 bits (230), Expect = 2.000e-15 Identity = 88/310 (28.39%), Postives = 136/310 (43.87%), Query Frame = 0 Query: 116 DTINWAINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHP--FEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINF-----TGMWVLI-------------TLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSY-MGIDVFYWTFLWPGEKLGIFWDVRSDAKGRVVKKQL 405 + ++W FP L+ VAC+ + V P F++ + R HR FSH+A+ SR FL GL TA QRGP+WW+S H RHH+Y + + D HS K F+++++GW + F R W V K E+ ++ ++P +L +W L L ++F TG +L+ TL +N H G N RY+ + +LA + L E H +HH YP A++ Y ID+ Y+ L G+ WD++ R+ K+L Sbjct: 27 EKVDWLRVFPFILVHVACL---LVFVVGWSPIVIVVALFSY---FIRMFAITAFYHRYFSHKAFRTSRVCQFLFGLLGATATQRGPIWWASHHRRHHRYSDTDR-----DMHSPR--KGFWWSHMGWFLSSKHFTTREQW--VRDLIKFPELRFLDRFDVVIP---VLYAVALWGLGK-WLEVSFPELGTTGWQMLVWGYFVSTIVLLHCTLSINSLSHVWG--------NQRYQTGDDSRNNGFLA--LITLGEGWHNNHHHYPVSARQGFYWWEIDISYY-LLKLMSWCGLIWDLQPVPVARLNSKRL 306
BLAST of NO13G03330 vs. NCBI_GenBank
Match: WP_014150305.1 (acyl-CoA desaturase [Methylomicrobium alcaliphilum] >CCE25556.1 fatty-acid desaturase [Methylomicrobium alcaliphilum 20Z]) HSP 1 Score: 92.4 bits (228), Expect = 3.400e-15 Identity = 88/310 (28.39%), Postives = 136/310 (43.87%), Query Frame = 0 Query: 116 DTINWAINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHP--FEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINF-----TGMWVLI-------------TLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSY-MGIDVFYWTFLWPGEKLGIFWDVRSDAKGRVVKKQL 405 + ++W FP L+ VAC+ + V P F++ + R HR FSH+A+ SR FL G+ TA QRGP+WW+S H RHH+Y + E D HS K F+++++GW + F R W V K E+ ++ ++P +L +W L L ++F TG +L+ TL +N H G N RY+ + +LA + L E H +HH YP A++ Y ID+ Y+ L G+ WD++ R+ K+L Sbjct: 27 EKVDWLRVFPFILVHVACL---LVFVVGWSPIVIIVALFSY---FIRMFAITAFYHRYFSHKAFRTSRVCQFLFGMLGATATQRGPIWWASHHRRHHRYSDTER-----DIHSPR--KGFWWSHMGWFLSSKHFPTREQW--VRDLIKFPELRFLDRFDVVIP---LLYAVALWGLGK-WLEVSFPELGTTGWQMLVWGYFVSTIVLLHCTLSINSLSHVWG--------NQRYQTGDDSRNNGFLA--LITLGEGWHNNHHHYPVSARQGFYWWEIDISYY-LLKLMSWCGLIWDLQPVPVARLNSKRL 306
BLAST of NO13G03330 vs. NCBI_GenBank
Match: KTD46482.1 (fatty acid desaturase [Legionella quateirensis]) HSP 1 Score: 92.0 bits (227), Expect = 4.400e-15 Identity = 80/284 (28.17%), Postives = 121/284 (42.61%), Query Frame = 0 Query: 118 INW--AINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINFTGMWVL------ITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSY-MGIDVFYWTFLWPGEKLGIFWDVR 393 INW I +Y CV Y F + ++ AFC LLHR F+H+ + SR F+ GLF+ T QRGPLWW S H RHH++ + G DPH+ + FFY++LGW + D +++ + E+ ++ WL P + +++ Y L N T W + I+ + G R+ N ++W LA + L E H +HH Y K+ Y ID+ Y+ EKL I ++R Sbjct: 31 INWRFVIEQIIYHAGALCVVYVGVSKTALFSFLFFDIFRAFCVTV--------LLHRYFTHRCFETSRGIQFIFGLFALTPLQRGPLWWVSHHRRHHQFTDKPG-----DPHTPK--QGFFYSHLGWYFTINDSATDKSYLKDWLRYPELIWIDRLEWLAPLVMMVLAYSYGALINHFYPELGTNGWQMVVWLYFISTVCVLHGSCIVNSVLHHVGYRRFNTNDNSRNMWLLA--LFTLGEGFHNNHHRYQASCKQGIYWWEIDLSYYVIKLL-EKLNIISNLR 296
BLAST of NO13G03330 vs. NCBI_GenBank
Match: WP_083501333.1 (acyl-CoA desaturase [Legionella quateirensis]) HSP 1 Score: 92.0 bits (227), Expect = 4.400e-15 Identity = 80/284 (28.17%), Postives = 121/284 (42.61%), Query Frame = 0 Query: 118 INW--AINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINFTGMWVL------ITLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSY-MGIDVFYWTFLWPGEKLGIFWDVR 393 INW I +Y CV Y F + ++ AFC LLHR F+H+ + SR F+ GLF+ T QRGPLWW S H RHH++ + G DPH+ + FFY++LGW + D +++ + E+ ++ WL P + +++ Y L N T W + I+ + G R+ N ++W LA + L E H +HH Y K+ Y ID+ Y+ EKL I ++R Sbjct: 33 INWRFVIEQIIYHAGALCVVYVGVSKTALFSFLFFDIFRAFCVTV--------LLHRYFTHRCFETSRGIQFIFGLFALTPLQRGPLWWVSHHRRHHQFTDKPG-----DPHTPK--QGFFYSHLGWYFTINDSATDKSYLKDWLRYPELIWIDRLEWLAPLVMMVLAYSYGALINHFYPELGTNGWQMVVWLYFISTVCVLHGSCIVNSVLHHVGYRRFNTNDNSRNMWLLA--LFTLGEGFHNNHHRYQASCKQGIYWWEIDLSYYVIKLL-EKLNIISNLR 298
BLAST of NO13G03330 vs. NCBI_GenBank
Match: PNH03724.1 (Acyl-CoA Delta(11) desaturase, partial [Tetrabaena socialis]) HSP 1 Score: 90.9 bits (224), Expect = 9.800e-15 Identity = 64/172 (37.21%), Postives = 88/172 (51.16%), Query Frame = 0 Query: 170 LHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHPFEKRVDWAFVHPHY-KTWEMALVESCTWLVPALEILIRYYIWDL--NNVLLHINFTGMWV--LITLMLNFKGHDDGKPSEPPAANGRYKCNAVPI 337 LHR FSH A+ SR FLLG+ +C A Q GP+WW+SKH RHH+YC+ DPHS+ F+Y+++GWT+ E VD FV + K E+ L++S W VP L +W L +++ + M + LITL N H P A KC + I Sbjct: 111 LHRFFSHGAFQTSRPFQFLLGVVACMAYQNGPIWWASKHNRHHRYCDTA-----ADPHSWLE-TGFWYSWVGWTLGRKEIPVDTTFVPMQFRKAPELWLLDS-FWCVPVL--AANLLVWHLAGYEAMIYCLYIPMMLCRLITLGFNVGFH----PMHKRAKEEDAKCKSTDI 269
BLAST of NO13G03330 vs. NCBI_GenBank
Match: PKM37772.1 (acyl-CoA desaturase [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-10]) HSP 1 Score: 89.0 bits (219), Expect = 3.700e-14 Identity = 88/298 (29.53%), Postives = 129/298 (43.29%), Query Frame = 0 Query: 116 DTINWAINFPMYLLFVACVCYTVTLAVQGHPFTWQEVTFAFCHAYWRAIMSWGLLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHSYHRIKNFFYAYLGWTIHP--FEKRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINF-----TGMWVLI-------------TLMLNFKGHDDGKPSEPPAANGRYKCNAVPIDVWYLARTIDLLAELDHVDHHLYPRKAKRDSY-MGIDVFYWTFLWPGEKLGIFWDVR 393 + ++W P L+ VAC+ + V P F++ + R HR FSH+A+ SR FL GL TA QRGP+WW+S H RHH+Y + E D HS K F+++++GW + F R W V K E+ ++ ++P +L +W L L I F TG +LI TL +N H G N RYK + +LA + L E H +HH YP A++ Y ID+ Y+ L G+ WD++ Sbjct: 27 EAVDWFRVIPFILMHVACL---LVFVVGWSPIVIIVALFSY---FIRMFAITAFYHRYFSHKAFRTSRVCQFLFGLLGSTATQRGPIWWASHHRRHHRYSDTER-----DMHSPR--KGFWWSHMGWFLSTKHFVTREQW--VRDLIKFPELRFLDRFDIVIP---VLYAVALWGLGK-WLEIAFPALGTTGWQMLIWGYFVSTIVLIHCTLFINSLSHVWG--------NQRYKTGDDSRNNGFLA--LITLGEGWHNNHHHYPVSARQGFYWWEIDISYY-LLKLMSWCGLIWDLQ 294
BLAST of NO13G03330 vs. NCBI_GenBank
Match: BBD52743.1 (putative desaturase [Emiliania huxleyi]) HSP 1 Score: 88.6 bits (218), Expect = 4.900e-14 Identity = 60/167 (35.93%), Postives = 79/167 (47.31%), Query Frame = 0 Query: 169 LLHRLFSHQAWACSRFTTFLLGLFSCTAAQRGPLWWSSKHCRHHKYCENEGPYPFCDPHS---YHRIKNFFYAYLGWTIHPFE--KRVDWAFVHPHYKTWEMALVESCTWLVPALEILIRYYIWDLNNVLLHINFTGMWV--LITLMLNFKGHDDGKPSEPPAANGR 329 +LHR SH A+ T+ LLG C A Q GPLWW S+H HHKYC+ DPHS I F + G T + VD +V H T M ++S WL P LE + Y ++ L ++FT WV + TL N + H G +E AA G+ Sbjct: 195 VLHRYASHAAFKVGPATSLLLGCLGCFAYQGGPLWWGSRHRSHHKYCDTTAR----DPHSPALMGVINAFTFFLSGATFDDVRSVQAVDEQYVPHHIDTPGMRAIDSMAWLFPCLEFALAYRLFGSGG--LFVSFTSSWVGMVATLWFNVRNHPIG-GAEDKAATGK 354 The following BLAST results are available for this feature:
BLAST of NO13G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03330 ID=NO13G03330|Name=NO13G03330|organism=Nannochloropsis oceanica|type=gene|length=3481bpback to top protein sequence of NO13G03330.1 >NO13G03330.1-protein ID=NO13G03330.1-protein|Name=NO13G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bpback to top Synonyms
Publications
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