NO13G03120, NO13G03120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03120 vs. NCBI_GenBank
Match: CBN74178.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 437.2 bits (1123), Expect = 1.100e-118 Identity = 244/547 (44.61%), Postives = 350/547 (63.99%), Query Frame = 0 Query: 3 VADKRVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLE-AEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVGGG-NRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDI--NIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEE-MLARCLAAMTGRKLTISRSMITGQHGMTTLVAEADGPLKEWDVLDYVKSLYDGTDRLFIPEVK--FMWNRPSAAVFDLDSVKAKRVLAKAAELAVDAGGPVPLMALSVCKEMPRLE 543 V +K V P V AL I FTP+Q TYD + GRD+IG+SRTGTGKT+AFGLP+ + + + E + R +RGR+P +++ PTRELA+Q +L +G GL +GG Y Q+R L G D+LV TPGRIMDHL RG L L D++H +LDEADEML MGFA+DIE IFSY DV + Q+LLFSAT PSWV++IA KY NP+ VDAVG N+ ATT++H++++V + R ++LED+I + G +VFT +K+E DEL+ + ++VLHGDI+Q QR+ T+K FR F+VL+ATDVAARGID+S++DLV+QYRP D DSYVHRSGR XXXXXXG +V +Y+E E +R++E + +FE+ +PS E V+S V E++K V +++V +F+ A +L+A+ ++ +E +LA+CLAA+ + RSM+TG+ T+ A L DV+ V L G F P V + P+ AVFD+ + A +++ + E +++ + +C +P L+ Sbjct: 258 VEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRH--RSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRXXXXXXXGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKL--GRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLES------IEFKMCPVLPVLQ 794
BLAST of NO13G03120 vs. NCBI_GenBank
Match: CEL98204.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 431.8 bits (1109), Expect = 4.700e-117 Identity = 218/456 (47.81%), Postives = 309/456 (67.76%), Query Frame = 0 Query: 7 RVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG-GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDA---PVEEMLARCLAAMTGRKLTISRSMITGQHGMTTL 459 ++S + LA+ NI + TPIQ +T+ P++DG DMIGRSRTGTGKT+AFGLP+ E + + E+ + +R R P +++L PTRELAKQ + ++ + R + I I+GGVP+ Q L G D++VGTPGR++D + G L L ++HV+LDEADEML MGFAEDIE+IF FDV Q+L+FSATTP WV+D++R+YLKNP++VD VG R AT++RH+AV+VP+ + VLED++A S GG+ +VFTQTK EADEL++ + A + VLHGDI Q+ R+ T+++FR G FKVL+ATDVAARGID+ VDLV+Q P D D+YVHRSGRT GT V++YS+ E ++L +LE+ +KF+ PS + V+ +L V+ V+P+F A D++ +SD EE+LARCLA M ++ + RS++ G TT+ Sbjct: 96 QISGKTSDVLARKNIVNMTPIQAQTFTPIYDGSDMIGRSRTGTGKTVAFGLPLLERLRTDKESI-PEVQRDRDPKILVLEPTRELAKQVEVEIGDVARVHRMGITCIHGGVPFGPQENALRKGVDIVVGTPGRLLDLIQSGHLRLDSLRHVVLDEADEMLNMGFAEDIERIFGSFDVRSCQVLMFSATTPRWVKDMSRQYLKNPLDVDVVGKSTQRTATSVRHIAVQVPERIEDKAAVLEDIVAVESRGGQTIVFTQTKREADELASEGAFKAFSAAVLHGDIGQQTRDHTMQRFRKGLFKVLVATDVAARGIDVGNVDLVVQCSPPKDPDAYVHRSGRTGRAGREGTCVLLYSDREKWELSKLESSCGVKFDIKPPPSTQLVMESSASAVARQLDTVEGPVIPFFLETARDVLKRSDGVGMGQEELLARCLAVMAKKQELVERSLLNGMPDHTTM 550
BLAST of NO13G03120 vs. NCBI_GenBank
Match: KOO24136.1 (nucleolar RNA helicase 2-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 419.1 bits (1076), Expect = 3.200e-113 Identity = 231/467 (49.46%), Postives = 310/467 (66.38%), Query Frame = 0 Query: 3 VADKRVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG-GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSC-GGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTISRSMITGQHGMTTLVAEA-DGPL 467 +A V V LA+ ITHFTPIQ ++YD L G DM+GRSRTGTGKTLAF LP+ + +A+ E + ERGRAP +++L PTRELAKQ + + +GRP + + T GG PY Q R L +G DVLVGTPGRI+DHLN G L L +++HV+LDEADEML MGF ED+E+I Q +LFSAT P WV+D++R++ +PI +DAVG G + AAT++ H AV P + +AR + L DVIA + + +VFT TK E DEL SS +A + + LHGD +Q QR++TL++FR+G F VL+ATDVAARGIDI +DLV+QYR D DSYVHRSG XXXXXX S+++YSE E ++ LE N++F K G PS V++ + +LK V+ +V YF A AA+L+A D V +A+ LA + G+ RS++TG+ G TTL+ EA DG + Sbjct: 109 IAMFNVDETTVTMLAEKGITHFTPIQAQSYDMLRAGHDMLGRSRTGTGKTLAFALPLVQRLAE--EQRRERPERGRAPRMLVLVPTRELAKQVGEVIQMLGRPHRMEVHTFTGGTPYPPQERALRNGIDVLVGTPGRIIDHLNNGGLLLDNLRHVVLDEADEMLNMGFKEDVEQILEAASAQDRQTVLFSATHPPWVRDVSRQHQTDPIEIDAVGKGQSEAATSVDHRAVLTPAAETARCSTLADVIAVYGTENAKTIVFTSTKREVDELCASSALSALSPQALHGDFSQAQRDLTLRRFREGHFNVLVATDVAARGIDIQGIDLVVQYRLPQDPDSYVHRSGXXXXXXXXXXSLLLYSEREEREVTNLERRANVRFVKSGPPSTSTVMAAAAQLVPRRLKAVEPKVQKYFTAAAAELLAGDD--VVAHVAQALALVAGKVTLTQRSLLTGEEGQTTLLLEASDGSM 571
BLAST of NO13G03120 vs. NCBI_GenBank
Match: GAX26794.1 (hypothetical protein FisN_9Lh058 [Fistulifera solaris]) HSP 1 Score: 416.4 bits (1069), Expect = 2.100e-112 Identity = 245/594 (41.25%), Postives = 347/594 (58.42%), Query Frame = 0 Query: 12 VVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLP----ICEVVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIF---SYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVGGGN-RAATTIRHVAVKVPDSYSARKNVLEDVIAA--------------------------------------HSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDI--NIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTI-SRSMITGQHGMTTL-VAEADGPLKEWDVLDYVKSL----YDGTDRLFIPEV-KFMWNRPSAAVFDLDSVKAKRVLAKAAELAVDAGGPVPLMALSVCKEMPRLENNGRSFGR 551 V++ L ITHFT +Q E +DP+ GRD+IGRSRTGTGKTLAFGLP + +++A EA GR RGR P +++L PTRELA+Q D+L+ + PLGL++ +GGV Y+ Q R L G D++VGTPGR+MDHL+RGTLSL +++ V+LDEADEML MGFAED+E I + + Q LLFSATTP WV +I R+Y +N + +DA G + R A+T+RH+AV+VP SA+K +LED+IA G+ +VF +TK ADEL + + + + LHGD++Q+QR+ TL FR G F VL+ATDVAARGIDI +VDLV+Q P D D+YVHRSGRT G SV++++ + + R+E D+ N +F+ G PSIE ++ + + EEV +F+ AA L+A D +++ARCLAA++ R + SRS++TG+ GM T+ + + DVL V L + D F ++ K + A+FD+ AK+++ + + VDAGG S+ KEM G +FGR Sbjct: 102 VLDVLNSRGITHFTKVQGEAFDPVLAGRDVIGRSRTGTGKTLAFGLPSIARLNKLLANRREANGRL-PRGRLPGMLVLCPTRELARQVKDELAAVAEPLGLYVDVFHGGVSYDPQSRALSQGLDIVVGTPGRVMDHLDRGTLSLNELQIVVLDEADEMLNMGFAEDVEVILEGAGKSNKDKTQCLLFSATTPKWVNEIGRRYQRNVLEIDATGNQDARVASTVRHLAVQVPPGVSAKKAILEDIIAVEISKDAGGDSESATDESENEFHNPVAAAAKKAKKQHLQQKIFGKTIVFCETKKMADELVSGGVFKSLTAQALHGDVSQKQRDATLNAFRAGAFNVLVATDVAARGIDIQDVDLVVQMDPPRDVDTYVHRSGRTGRAGNKGVSVLMFNPQQSRDIVRIERDLGHNFRFQLTGPPSIEAALNAAAKTSALACQGIPEEVSTHFEESAAALLADEDEDPVKVVARCLAAISRRATQVESRSLLTGEVGMVTVQMMNERRSVAPNDVLFTVSKLARLSRESADLTFENDIGKILARDDKTAIFDMSLEDAKKLVEFSKD--VDAGG----NTFSILKEME--VERGNNFGR 686
BLAST of NO13G03120 vs. NCBI_GenBank
Match: XP_005776221.1 (hypothetical protein EMIHUDRAFT_443976 [Emiliania huxleyi CCMP1516] >EOD23792.1 hypothetical protein EMIHUDRAFT_443976 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 412.9 bits (1060), Expect = 2.300e-111 Identity = 251/573 (43.80%), Postives = 341/573 (59.51%), Query Frame = 0 Query: 3 VADKRVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG-GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGG--RVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTISRSMITGQHGMTTLVAEA-DG-PLKEWD----VLDYVKSLYDGTDRLFIPEVKFMWNRPSAAVFDLDSVKAKRVLAKAAELAVDAGG-----------PVPL----MALSVCKEMPRLENNGRSFGRG 552 +A V V LA ITHFTPIQ +++ L G DM+GRSRTGTGKTLAF LP+ +A+ L+ G + RGR P +++LAPTRELA+Q + S + P L +GGVPY Q R L G DVL+GTPGRI+DHLN G L L ++ +LDEADEML MGF +D+E I D + Q +LFSAT P WV+ +AR+Y K+P +D VG G + AA+T++H+AV PD+ ++R L D+I+ H+ G R +VFT TK E DEL S+ A + + LHGDI+Q+ RE TL++FRDG F VL+ATDVAARGIDI VDL++QYR DS+SYVHRSG XXXXXX T+++++SE E + LE I+F K G PS++ V+ + ++ VD ++PYFK AA L+ DA ++++ A C A + G+ S++TG+ + TL+ EA DG PL+ D V V SL I +++ P VFDL A V+A LA GG P L +++S C E+P L G G G Sbjct: 125 IASFDVGAATVAVLAAKGITHFTPIQAKSFSLLKGGADMLGRSRTGTGKTLAFALPLITALAE-LQEPGERLPRGRTPRMVVLAPTRELARQVSEVCSMLAAPHRLRTVLFHGGVPYPPQQRALRDGVDVLIGTPGRIIDHLNEGALDLSAVRFAVLDEADEMLNMGFKDDVETILQATDDSLRQTVLFSATHPPWVKSVAREYQKSPELIDVVGRGRSEAASTVQHIAVLTPDAEASRARTLADLISVHATGADTRTIVFTATKREVDELCVSAALAPLSAQPLHGDISQKARETTLQKFRDGHFPVLVATDVAARGIDIEGVDLIVQYRLPQDSESYVHRSGXXXXXXXXXTAILLHSERERRSVGDLERRTGIRFAKQGPPSVQTVMGAAAALVPRRIGTVDPRLLPYFKEAAAALLEGDDA-LQKVAAMC-AVVAGQSSLSQHSLLTGEEHLKTLLVEATDGAPLEARDAVASVAQLVPSLNGERCADSIGKIR-QCASPCKVVFDLPDEMADAVVAAFDALAATDGGEDGAARPSGRRPTLLDSGVLSISACAELPELRPLGGRGGGG 693
BLAST of NO13G03120 vs. NCBI_GenBank
Match: EJK48957.1 (hypothetical protein THAOC_32204 [Thalassiosira oceanica]) HSP 1 Score: 411.4 bits (1056), Expect = 6.600e-111 Identity = 251/615 (40.81%), Postives = 356/615 (57.89%), Query Frame = 0 Query: 8 VSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLP----ICEVVAKNLEAEGRKN-----ERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIF---SYFDVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG--GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAA-------------------------------------------HSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDI--NIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTI-SRSMITGQHGMTT--LVAEADGPLKEWDVLDYVKSL-----YDGTDRLFIPEV-KFMWNRPSA-AVFDLDSVKAKRVLAKAAELAVDAGGPVPLMALSVCKEM--PRLENNGRSFGRG 552 VS V++ L+ IT+FTP+Q + P+ GRD+IGRSRTGTGKTLAFG+P + E+ N +AE ++ RGR PS+I+L PTRELA+Q ++LS + +PLGL+ +GGV Y+ Q R+L G DVLVGTPGRI+DHL+RG L L++ K +LDEADEML MGFAED+E I + + Q LLFSATTP WV++I +Y K+ +++D G G R A T+RH A++VP A+K +LED+IA G+ +VFT+TK+E D+L + S + + +HGDI Q+QR+ TL FR G F VL+ATDVAARGIDI +VDLVIQ+ P D+D+YVHRSGRT G SV+++ + + + R+E + KFE +G PS E + K+V +E +F+ A L+A DA E+++ARCLAA++ R + + SRS++TG+ G +T + P+ DV+ V L +G D F +V K NR + AVFD+ AK+++ +AE ++AGG V S+ KEM R N G+++GRG Sbjct: 213 VSQDVIDVLSHKGITNFTPVQAKAMRPVLAGRDVIGRSRTGTGKTLAFGIPAITRLVEIAKDNGDAEVMRDGSIRMRRGRLPSMIVLCPTRELARQVGEELSAVCKPLGLFATVFHGGVSYDPQSRNLRQGIDVLVGTPGRIIDHLDRGNLDLRECKVAVLDEADEMLNMGFAEDVEVILEGAGNANDEKFQCLLFSATTPPWVREIGSRYQKDALSIDITGEQTGARTAKTVRHTAIQVPFGIDAKKAILEDIIAVEISKDVKLDASQDXXXXXXXXXXXXXXXXXXXXXXXXXXSALQQKIFGKTIVFTETKAECDQLVSGSVFKTLTAQTIHGDIGQKQRDATLAAFRAGSFNVLVATDVAARGIDIKDVDLVIQFHPPRDTDTYVHRSGRTGRAGAKGISVVLFQQNQARDIVRMERSLGHGFKFELLGPPSTEAALIAAAKTSAIACKSVADETAEHFREAAGILLATDDA--EDVVARCLAAISRRAVQVESRSLLTGEAGFSTVEMTNSRGRPVSPGDVMFTVSKLSRMSQKEGGDLSFDGDVGKIQTNRETGNAVFDMGVEDAKKLVEFSAE--IEAGGAV----FSLMKEMEISRGRNFGQTYGRG 819
BLAST of NO13G03120 vs. NCBI_GenBank
Match: OSX73812.1 (hypothetical protein BU14_0326s0006 [Porphyra umbilicalis]) HSP 1 Score: 407.9 bits (1047), Expect = 7.300e-110 Identity = 239/558 (42.83%), Postives = 342/558 (61.29%), Query Frame = 0 Query: 7 RVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGRKN---ERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYFDVT--QAQMLLFSATTPSWVQDIARKYLK-NPINVDAVGGGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSC---GGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTIS-RSMITGQHGMTTLVAEADGPLKEWDVLDYVKSL---YDGTDRLFIPEVKFMWNRPSAAVFDLDSVKAKRVLAKAAELAVDAGGPVPLMALSVCKEMPRLENNGRSFGRG 552 R++P VV+ LA ITH T +Q T+D L++GRDMI RSRTGTGKTLAF LPI E +A + A+G RG ++LAPTRELA Q +++ G+PL + + YGG Y Q+ L G DV+VGTPGR+MD ++RG + L D++ +LDEADEML MGFAED+E++F F T + Q +LFSAT PSWV+ +A ++ K + I D+VG G+ A +RHVAV+VPD S R ++L DV+A + GGR +VFT+TK E DEL+ S VLHGD++Q+QRE+TL QFR G F VL+ATDVAARG+DIS V++V+QYR D+++YVHR+GRTXXXXXX SV+++S+ E LRRLE D+ +KFE+ P+ E + + + +K+VD VV + A +++A+ P+ A C+ A+ GR+ + RS+++G+ G L+ PL V+ +V L D L + ++ + SA V D + A + A + D ++L + E+P L+ FGRG Sbjct: 155 RITPAVVDNLANRGITHMTDVQAGTFDLLYEGRDMIARSRTGTGKTLAFALPILERLAASKAADGSAGGGYRRGAKTRCLVLAPTRELANQVAREMTLTGKPLRISVECFYGGASYGAQVSALRRGVDVVVGTPGRVMDLMDRGDMDLSDVEFAVLDEADEMLSMGFAEDVERVFGAFSRTEMERQTVLFSATVPSWVKKLASQHQKRDVITYDSVGKGDMTAVNVRHVAVRVPDRDSTRASLLADVLAVYGSGHGGGRAIVFTETKRECDELAASGALEGCGAAVLHGDVSQKQREVTLAQFRSGRFAVLVATDVAARGLDISGVEVVVQYRLPSDTEAYVHRAGRTXXXXXXXVSVVLHSDREAGGLRRLERDVGLKFERTSAPAPEAALDAAAMHVSAAMKDVDAAVVAHLLPTAKEVLAQYKHPI-AAFAACM-ALAGRRTKLEYRSVLSGESGKRALLVSGTIPLTPAVVVRFVSRLARKIGVDDELEVGMIRVCADGRSAVV-DTGAAAADALAKAAVKHNSDE------LSLKLATELPPLQE--ERFGRG 701
BLAST of NO13G03120 vs. NCBI_GenBank
Match: XP_005535707.1 (nucleolar RNA helicase II/Gu [Cyanidioschyzon merolae strain 10D] >BAM79421.1 nucleolar RNA helicase II/Gu [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 403.7 bits (1036), Expect = 1.400e-108 Identity = 250/583 (42.88%), Postives = 344/583 (59.01%), Query Frame = 0 Query: 8 VSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICE-VVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYF-DVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG-GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGG--RVMVFTQTKSEADELS-TSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVD-EEVVPYFKAFAADL-VAKSDAPVEEMLARCLAAMTGRKLTISRSMITGQHGMTTLVAEAD-GPLKEWDVLDYVKSLYDGTDRLFIPEV--KFMWNRPSAAVFDLDSVKAKRVL---------------------AKAAELAVDAGGPV-------PLMALSVCKEMPRLENNGRSFGRG 552 +S AL + IT T IQ T++ + GRD+IGRS TGTGKT AFG+P+ E +V + R+ GR+P ++L PTRELAKQ +QL IG+P GL + YGG Y +Q L GFDVLVGTPGRI+DHL+RGTL+L +I+ +LDEADEML +GFAED+E+IF + Q +LFSAT P WVQ IA ++ + P+ D VG RAA +RHVAV+VPD+ AR +LED++ AH+ G R +VFT TK EADE++ T+S + + +VLHGD++QRQRE+TL+QFRDG F +L+ATDVAARG+DI EVD+++Q RP D D+Y+HR+GR XXXXXX T+VI+YS+ E LR LE +I+FE+ G P++E V+ + VVPYF+ A +L A+ + LA LA ++GR RS++TG+ G+ TL+ + + DVL V+ L + +LF ++ + P AVFD+ A +L A A AGG P + VC +P L + F G Sbjct: 109 LSEATAAALRKKGITELTEIQAITFNDMRSGRDVIGRSHTGTGKTFAFGVPLVERMVEARVSNGSRRGAPGRSPCALVLTPTRELAKQVTEQLRLIGQPHGLAVDCFYGGASYTQQEEALRRGFDVLVGTPGRILDHLDRGTLNLSNIRIAVLDEADEMLSLGFAEDVERIFQKMPPKEERQTVLFSATIPPWVQKIAAQHQRAPVVHDVVGRTETRAAKNVRHVAVRVPDADFARFAMLEDIVFAHAETGNQRCIVFTDTKREADEIAMTASIFRSSVAQVLHGDVSQRQRELTLQQFRDGRFSILVATDVAARGLDIHEVDVIVQMRPPRDVDTYIHRAGRXXXXXXXXTAVIMYSDSERGLLRALERGASIRFEQAGPPTLERVLDVAAQNAARAVGEASTNRVVPYFQRAADELAAAQFEGDARRALAAALAVISGRTHIEHRSLLTGEAGLRTLLLTMNRAGVTPRDVLGIVRRL-SQSGKLFTDDIGKVRLCRDPRQAVFDVSVEAADEILRCMEPQSTTDATSSDAENGTTASHASTGAAAGGGTGDRRTRYPDFTIEVCAALPELRVDDYRFSSG 690
BLAST of NO13G03120 vs. NCBI_GenBank
Match: XP_005718016.1 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 21-like, putative [Chondrus crispus] >CDF38147.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21-like, putative [Chondrus crispus]) HSP 1 Score: 402.5 bits (1033), Expect = 3.100e-108 Identity = 236/548 (43.07%), Postives = 328/548 (59.85%), Query Frame = 0 Query: 7 RVSPGVVEALAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGRKNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYF-DVTQAQMLLFSATTPSWVQDIARKY-LKNPINVDAVGGGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCG----------GRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDINIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTISRSMITGQHGMTTLVAEADGPLKEWDVLDYVKSLYDGTDRLFIPEVKFMWNRPSAAVFDLDSVKAKRVLAKAAELAVDAGGPVPLMALSVCKEMPRLE 543 R+SP ++ L + +ITH T +Q T+D LF+G+D+I +SRTGTGKTLAFGLPI E +A + G RG P I+LAPTRELAKQ ++S +G+ LGL + YGGV Y Q L G DV+VGTPGRIMDHLN+G L L +I +LDEADEML MGFA+D+E IF + Q++LFSAT P WV+++A ++ K+ + DAV G+ A+TT+RH AV+VP+ AR +L DVIA HS G R +VFT+TK EADEL+TS VLHGD++Q+QRE+TL QFR G F+VL+ATDVAARG+DIS VD+VIQYR +D++SY+HR+G XXXXXX YS+ E LR LE + I+F+ P+ E + V + + VDE V+ + A +++A E LA LA R RS+++G+ GM T+V + + + ++ L + + M R +AV D+ S A ++ + +L DA + L V +P+L+ Sbjct: 9 RLSPRTIQMLKKNDITHTTEVQAGTFDLLFEGKDIIAKSRTGTGKTLAFGLPIMERLAIIRKERGGPKPRGEGPGCIVLAPTRELAKQVSREMSHLGQGLGLSVECFYGGVGYGPQENALRRGVDVVVGTPGRIMDHLNKGNLRLDNISFAVLDEADEMLSMGFAQDVETIFETLPPENERQVILFSATVPRWVKNLASQFQKKDVVTFDAVTSGSMASTTVRHCAVRVPERDEARAGLLADVIAVHSQGRCEDTIKRGPSRAIVFTETKREADELATSGSLDGCGAAVLHGDVSQKQREVTLSQFRQGQFQVLVATDVAARGLDISGVDVVIQYRVPNDAESYIHRAGXXXXXXXXXXXXXXYSDRESRNLRNLERECRIRFDMEVAPAPETALEAAVNVALDNISGVDERVIKHLLPRAEEMLASGAEDTAEKLAAILAIAGRRTRLEDRSILSGEKGMRTVVVSGEREISPGLAMRFISDLARAAETESRVGLIRMC-RDGSAVVDVISDAALGLVGASEKLGEDAE-----IKLRVASGVPQLK 550
BLAST of NO13G03120 vs. NCBI_GenBank
Match: XP_002289813.1 (RNA helicase, partial [Thalassiosira pseudonana CCMP1335] >EED93350.1 RNA helicase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 399.1 bits (1024), Expect = 3.400e-107 Identity = 210/460 (45.65%), Postives = 297/460 (64.57%), Query Frame = 0 Query: 16 LAQANITHFTPIQRETYDPLFDGRDMIGRSRTGTGKTLAFGLPICEVVAKNLEAEGR---------KNERGRAPSVIILAPTRELAKQCDDQLSRIGRPLGLWIRTIYGGVPYERQIRDLESGFDVLVGTPGRIMDHLNRGTLSLKDIKHVILDEADEMLKMGFAEDIEKIFSYF---DVTQAQMLLFSATTPSWVQDIARKYLKNPINVDAVG--GGNRAATTIRHVAVKVPDSYSARKNVLEDVIAAHSCGGRVMVFTQTKSEADELSTSSPYAAENTRVLHGDITQRQREITLKQFRDGFFKVLIATDVAARGIDISEVDLVIQYRPCDDSDSYVHRSGRTXXXXXXGTSVIIYSEPEWFKLRRLENDI--NIKFEKVGMPSIEDVISGLCLVQTEKLKNVDEEVVPYFKAFAADLVAKSDAPVEEMLARCLAAMTGRKLTI-SRSMITGQHGMTTL 459 L+ ITHFTP+Q + P+ GRD+IGRSRTGTGKTLAFG+P + + + +G + +GR PS+I+L PTRELA+Q +D+LS + +PLGL+ +GGV Y+ Q R L G DV+VGTPGR++DH++RG L L + V+LDEADEML MGFAED+E I + + Q LLFSATTP WV++I Y ++ +++D G G+R A+T+RH A++VP A+K +LED+IA G+ +VFT+TK EADEL + S + + + +HGDI Q+QR+ TL FR G F VL+ATDVAARGIDI +VDLVIQ+ P D D+YVHRSGRT G SV+++ + + + R+E + KFE +G PS E ++ + V +E +FK A L+A S +P E+++ARCLAA+ R + + SRS++TG+ G T+ Sbjct: 1 LSHKGITHFTPVQAKAMSPVLAGRDVIGRSRTGTGKTLAFGMPALTRMVERAKEKGNLEQGRDGSTRMRKGRLPSMIVLCPTRELARQVEDELSAVCKPLGLFSSCFHGGVSYDPQARALRQGVDVIVGTPGRVIDHIDRGNLDLSECDTVVLDEADEMLNMGFAEDVEVILEGVGSKNREKTQCLLFSATTPPWVKEIGSHYQRDVLSIDITGEQTGSRVASTVRHTAIQVPFGADAKKAILEDIIALF---GKTIVFTETKKEADELVSGSVFKTLSAQAIHGDIGQKQRDATLAAFRAGAFNVLVATDVAARGIDIKDVDLVIQFEPPRDVDTYVHRSGRTGRAGASGISVLLFQQNQARDIVRIEKSLGHGFKFELLGPPSTEAALNAAAKTSALACRGVADETAAHFKDAAVSLLASSGSP-EDVVARCLAAIARRTVQVNSRSLLTGEEGYATV 456 The following BLAST results are available for this feature:
BLAST of NO13G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03120 ID=NO13G03120|Name=NO13G03120|organism=Nannochloropsis oceanica|type=gene|length=5453bpback to top protein sequence of NO13G03120.1 >NO13G03120.1-protein ID=NO13G03120.1-protein|Name=NO13G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=817bpback to top Synonyms
Publications
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