NO13G02870, NO13G02870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02870 vs. NCBI_GenBank
Match: EWM21952.1 (trna rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 468.0 bits (1203), Expect = 4.300e-128 Identity = 299/595 (50.25%), Postives = 344/595 (57.82%), Query Frame = 0 Query: 10 LLPS-LVLFTAAASSTIATLPLLR-FTFLSAVSSSFSLP----SLSSLIKR-SCSASTFVCPLSHQHQQLRQHSSNCHSKPRRFFSTS----SSSSAGTLPK--------KNAWGQRIVPLDNLPHPVPPXXXXXXXXXXXXXXXXXXDLTDPLLRRGLPEIGDIKEGIAFFHLQQEPQEGQSEQQQGATNSSDGSVLPSLSLAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIGIPIRDGCLVDPQSRPGTPRIHLLLPPTMDPSLPLAGLPSSTITVTWNGDKIRAGSSHRCAATRNDDVAPERKAALDAALVTLGIDVQALTEEDQVTGSGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAFEYKMEG 586 LLPS LVL T+ +I PL + ++ +SS+ SLP +L+ +R S + F H+ L + H RRF S S +S S LP KNAWGQRI+PL++L +PP DLTD LLRRG+PE+ DIKEG+ FF LQQ P G+ + +IR GSSHRCAATR D V P RKAALDAAL +L ID+QAL++EDQVTGSGSSALRSYFSFVQPRP+KQH PVDNA++ AA RAANQIAFLVRAYRAEQAE+LRNHDEAMS LQ MHPL+LILDN+RSAYNVGSLFRTAETAL+ E+ITCGFTPHPPH+KLKKTACRS+ENVPSRHF TTL+AV+ +KEEGF+V+AMETTSRS+CY HV FPEK ALVLGNEVIGVDT VLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWG F+ K EG Sbjct: 6 LLPSLLVLVTSRTIRSIPGPPLAKPARGVALLSSASSLPHPFSTLAGTSRRIFISRARFDSLPGHRRAPLTESYFYRHEVHRRFVSKSVLFAASPSPSALPPASSLDPPLKNAWGQRIIPLNDL--SLPP-------------SSAVLDLTDDLLRRGIPELADIKEGLVFFQLQQPPHSGR-----------------------------------------------------------------------------------------------------------------------------------DSARIRTGSSHRCAATREDAVVPARKAALDAALTSLDIDLQALSQEDQVTGSGSSALRSYFSFVQPRPHKQHAPVDNALEAAALRAANQIAFLVRAYRAEQAEFLRNHDEAMSRLQSFPRSMHPLVLILDNVRSAYNVGSLFRTAETALLQELITCGFTPHPPHEKLKKTACRSLENVPSRHFSTTLDAVRTMKEEGFVVFAMETTSRSQCYTHVAFPEKAALVLGNEVIGVDTAVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGTFD-KAEG 453
BLAST of NO13G02870 vs. NCBI_GenBank
Match: XP_005852777.1 (trna rrna methyltransferase [Nannochloropsis gaditana CCMP526] >EKU23059.1 trna rrna methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 291.2 bits (744), Expect = 7.200e-75 Identity = 142/171 (83.04%), Postives = 155/171 (90.64%), Query Frame = 0 Query: 415 MSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAFEYKMEG 586 MS LQ MHPL+LILDN+RSAYNVGSLFRTAETAL+ E+ITCGFTPHPPH+KLKKTACRS+ENVPSRHF TTL+AV+ +KEEGF+V+AMETTSRS+CY HV FPEK ALVLGNEVIGVDT VLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWG F+ K EG Sbjct: 1 MSRLQSFPRSMHPLVLILDNVRSAYNVGSLFRTAETALLQELITCGFTPHPPHEKLKKTACRSLENVPSRHFSTTLDAVRTMKEEGFVVFAMETTSRSQCYTHVAFPEKAALVLGNEVIGVDTAVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGTFD-KAEG 170
BLAST of NO13G02870 vs. NCBI_GenBank
Match: XP_005833677.1 (hypothetical protein GUITHDRAFT_86637 [Guillardia theta CCMP2712] >EKX46697.1 hypothetical protein GUITHDRAFT_86637 [Guillardia theta CCMP2712]) HSP 1 Score: 224.2 bits (570), Expect = 1.100e-54 Identity = 122/250 (48.80%), Postives = 167/250 (66.80%), Query Frame = 0 Query: 328 RKAALDAALVTLGIDVQALTEEDQVTGSGSSALRSYFSFVQPRPNKQ-HGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQW 577 R+ ALD L LG+++ L T GS A ++Y+SFV PR Q H P++ + A R A+QI FL R +RA AE+LR DEA + +HP++L+LDN+RSA+NVGS+ RTAETA V +V+ CG TPHPP+ K+ KTA RS + V H D+TL AV+K+ + VYA+ETTS+S Y V F + AL++GNE++G+ VL+EC+ +IEIP +G KNS+NVA A PVV++EVLRQW Sbjct: 172 RQVALDEKLKDLGVNISELLFSK--TFDGSPARKAYWSFVNPREGIQTHSPLE-PFENAVKRYASQILFLDRGHRARLAEFLRTGDEAKAEKVNSCTVIHPVVLVLDNLRSAHNVGSIIRTAETAGVEKVVACGITPHPPNGKVLKTALRSADYVEVEHEDSTLNAVRKLLSRNYSVYALETTSQSRAYTLVNFSKPCALIVGNELLGISPEVLQECN-QLIEIPMYGFKNSMNVACACPVVLYEVLRQW 417
BLAST of NO13G02870 vs. NCBI_GenBank
Match: CBJ33268.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 220.7 bits (561), Expect = 1.200e-53 Identity = 134/325 (41.23%), Postives = 182/325 (56.00%), Query Frame = 0 Query: 322 DDVAPERKAALDAALVTLGIDVQALTEEDQVTGSGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHP---PHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFP-------------------------------------------------------------------EKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQW 577 ++ + R+ ALD ALVT+G+D + LTE D+ G++AL+SY +FV+PRP + + + AA R A+Q+AFLVR +RA++AEYLRN D +M+ ++R L HP+ L+ DN+RSAYNVGS+FR+A+TA V+EVITCGFTPHP +K++KT S++ V RHF+ EAV+ +K G V A+ETT + V+FP VALVLGNEV GVD VL CD ++E+P FG KNSLNVASA VV++EVLRQW Sbjct: 237 NEFSAARQEALDEALVTVGVDPRELTEADEF--FGTAALKSYNTFVRPRPKQLAKVMQEPVARAALRTASQVAFLVRRHRADRAEYLRNKDASMTEAERRGLVAHPVALVCDNVRSAYNVGSIFRSADTARVAEVITCGFTPHPGGHGEEKVRKTGFGSVDAVAHRHFEDPSEAVRSLKAAGAFVCALETTDNASSLFDVRFPLPPALEGKARPKNASAVDAGTAGGGDVVRGSFAAEDSENEARAPKTDGRAVERLDGGSRGGLELEEGGVVALVLGNEVTGVDERVLGLCD-LVVEVPVFGLKNSLNVASAGTVVLYEVLRQW 558
BLAST of NO13G02870 vs. NCBI_GenBank
Match: CEM37799.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 215.7 bits (548), Expect = 3.800e-52 Identity = 122/285 (42.81%), Postives = 168/285 (58.95%), Query Frame = 0 Query: 322 DDVAPERKAALDAALVTLGIDVQALTEEDQV--------------------------TGSGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAFE 581 ++ + RKAALD AL + + L E + G G SA R+Y+++V+P P+K G ++ +A R A QIA LVRAY+ + RN D L++ +PL+++LDN+RSA+NVGS+ RTAE V V+ CG TPHPPH KL KT+ + E++P H T +EAV+++KEEGF + +ETT RS+ + + FP K A+V GNEV GV T VL D + EIP FG KNS+NVA+AA +VVFEVLRQW AF+ Sbjct: 142 EEYSGRRKAALDVALRSFDLSPPQLANESTMHTTRDAXXXXXXXXXXXXXVDRCIDWDGFGMSAQRTYYTYVRPHPSKLAGLQREPLERSAWRTAAQIAGLVRAYQNSLNAFFRNQDSTRPKLREAG-GRNPLVVVLDNVRSAHNVGSIIRTAEAGGVERVVVCGITPHPPHPKLDKTSLGAHEHIPVHHVGTCVEAVRQLKEEGFTIVVLETTDRSQPHVDISFPPKTAVVFGNEVSGVATDVLHLAD-VLCEIPMFGVKNSINVANAASIVVFEVLRQWRAFD 424
BLAST of NO13G02870 vs. NCBI_GenBank
Match: XP_005836254.1 (hypothetical protein GUITHDRAFT_104804 [Guillardia theta CCMP2712] >EKX49274.1 hypothetical protein GUITHDRAFT_104804 [Guillardia theta CCMP2712]) HSP 1 Score: 203.0 bits (515), Expect = 2.600e-48 Identity = 128/328 (39.02%), Postives = 170/328 (51.83%), Query Frame = 0 Query: 312 SSHRCAATR-NDDVAPERKAALDAALVTLGIDVQALTEEDQVTGSGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLI--------------------------------------------------------LDNIRSAYNVGSLF-----RTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWG 578 +SH R D +P R ALD AL LG + + + + G+ A R+Y S+V PR N+ V+ + AA R A Q++FL+R +RA A+YLRN D A + L HP+ L+ + F RT+E A +V+TCGFTPHPPH+KL KTA +IE VPSRHF+TT EA++ +K EG + METTSRS+ Y + +P+ ALVLGNE+ G+ T V+++CD ++EIPTFG KNSLNVASA PVVVFEVLRQWG Sbjct: 10 ASHVLGTPREGDSSSPLRARALDEALRRLGENPEDILSD---MFQGTPAKRAYMSYVNPRANRTPNNVETMEESAA-RTAKQVSFLMREHRATLADYLRNVDAARQEQESLGLEPHPITLVGLSETLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDQFTTWEAFSDRRDRTSERAADQQVVTCGFTPHPPHEKLSKTALSAIEFVPSRHFETTAEAIRVLKSEGVHIIGMETTSRSKSYVRLSYPQPCALVLGNELTGICTQVMQDCD-ELVEIPTFGVKNSLNVASACPVVVFEVLRQWG 332
BLAST of NO13G02870 vs. NCBI_GenBank
Match: GAX12629.1 (tRNA (guanosine-2'-O-)-methyltransferase [Fistulifera solaris]) HSP 1 Score: 193.4 bits (490), Expect = 2.000e-45 Identity = 123/286 (43.01%), Postives = 171/286 (59.79%), Query Frame = 0 Query: 321 NDDVA----PERKAALDAALVTLGIDVQALTE------EDQVTG----SGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPP---HDKLKKTACRSIENVPSRHFDTTLEAVKKVKEE--GFLVYAMETTSRSECYAHVQFPEK-VALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAFEYKMEGN 587 NDD+ ER+ L +L L ID Q L + ED G G SA+R+Y SF+ +A AANR A QI FL+ +++ QAE++R+HD QQ S P++L+LDN+RSA+NVGS+FRTA+ VS V+T G TPHP +KL K+A + VPS HF TT +A++ ++ E + + METT RS+ Y++ +P V L+LGNEV GVDT V+ + D I+EIP +G KNSLN+A+ APVV++EVLRQW + + E N Sbjct: 52 NDDITKEIFDERRNRLWTSLQELEIDAQELDQAAISSLEDPTMGYDNRYGKSAIRTYRSFLFSTKQPTSFSTISA-TAAANRCARQIQFLLNRHKSHQAEFVRHHDTP----QQSSRKTFPIILLLDNVRSAFNVGSIFRTADACGVSLVVTVGITPHPEGSGQEKLNKSALGAERLVPSVHFATTRQALEFLRNEKSDYQIIGMETTERSQLYSNYSYPASGVVLLLGNEVTGVDTDVMNDLD-AIVEIPMYGAKNSLNIAACAPVVLYEVLRQWSWSKCEGESN 331
BLAST of NO13G02870 vs. NCBI_GenBank
Match: GAX27796.1 (tRNA (guanosine-2'-O-)-methyltransferase [Fistulifera solaris]) HSP 1 Score: 191.8 bits (486), Expect = 5.900e-45 Identity = 120/271 (44.28%), Postives = 168/271 (61.99%), Query Frame = 0 Query: 323 DVAPERKAALDAALVTLGIDVQALTE------EDQVTG----SGSSALRSYFSFVQPRPNKQHGPVDN-AIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHP---PHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEE--GFLVYAMETTSRSECYAHVQFPEK-VALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQW 577 ++ ER+ L +L L ID Q L E ED G G SA+R+Y SF+ KQ P+ + AA+R A QI FL+ +++ QAE++R+HD QQ S P++L+LDN+RSA+NVGS+FRTA+ VS V+T G TPHP +KL+K+A + VPS HF TT +A++ ++ E + + METT RS+ Y+ +P V L+LGNEV GVDT V+ + D I+EIP +G KNSLN+A+ APVV++EVLRQW Sbjct: 68 EIIDERRNRLWKSLRELEIDAQELDEAAISSLEDPTLGYDNRYGKSAIRTYRSFLY--STKQPTPLSTISATAAAHRCARQIQFLLNRHKSHQAEFVRHHDAP----QQSSRRTFPIILLLDNVRSAFNVGSIFRTADACGVSLVVTVGITPHPGGSGQEKLQKSALGAERLVPSVHFATTRQAMEFLRNEKSDYQIIGMETTERSQLYSDYSYPASGVVLLLGNEVTGVDTDVMNDLD-AIVEIPMYGAKNSLNIAACAPVVLYEVLRQW 331
BLAST of NO13G02870 vs. NCBI_GenBank
Match: XP_005778727.1 (hypothetical protein EMIHUDRAFT_469008 [Emiliania huxleyi CCMP1516] >EOD26298.1 hypothetical protein EMIHUDRAFT_469008 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 186.8 bits (473), Expect = 1.900e-43 Identity = 111/261 (42.53%), Postives = 159/261 (60.92%), Query Frame = 0 Query: 328 RKAALDAALVTLGIDVQALTEEDQVTGSGSSALRSYFSFVQPRPNKQHGPVDNAIDLAANRAANQIAFLVRAYRAEQAEYLRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRS-ECYAHVQFPEK---VALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAFEYKME 585 R AA+DA L LG+ D + + ++Y +F +PR + D+ + A A Q+AFL R +A + E LRN D+A L++ + P H + ++LDN+RSA NVGS+FRTA+ V V+TCGFT PP KL+KTA ++ +VP HF+ T+ AV+ ++ G V A+ETT + Q ++ VA+VLGNEV GVD V+EECD ++EIP FG KNSLNVA A V ++EVLR+WG +E ++E Sbjct: 72 RAAAIDAELSRLGV-----ASPDAL--APGPPRKAYETFARPREGEPCD--DDYVRRKAPLMAQQVAFLHRHEQARRNELLRNVDDATQALERAARPRHNVTVVLDNLRSAENVGSIFRTADATRVCRVVTCGFTTTPPDRKLEKTALGALSSVPCDHFEATIAAVRHLRSRGVYVVALETTEDAIPLGVAPQLGDEGRGVAIVLGNEVTGVDKAVMEECD-AVVEIPVFGVKNSLNVACCASVALYEVLRRWGKWESRVE 322
BLAST of NO13G02870 vs. NCBI_GenBank
Match: ERP38996.1 (RNA methylase, SpoU family [Chitinivibrio alkaliphilus ACht1]) HSP 1 Score: 165.2 bits (417), Expect = 6.000e-37 Identity = 82/172 (47.67%), Postives = 117/172 (68.02%), Query Frame = 0 Query: 408 LRNHDEAMSLLQQRSLPMHPLLLILDNIRSAYNVGSLFRTAETALVSEVITCGFTPHPPHDKLKKTACRSIENVPSRHFDTTLEAVKKVKEEGFLVYAMETTSRSECYAHVQFPEKVALVLGNEVIGVDTMVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQWGAF 580 +R D + + + R+LP H L +ILDN+RSA+NVG++FR A+T V+E+ CG+T +PPH KL KT+ +I+ VP RHF TT++AV + + ++ ETTS S Y V+ P KVAL+LGNE +G+ VL+ CD +IEIPTFG KNSLNVA+A V+ + +L + F Sbjct: 14 VRTFDVDIPVEEYRALPRHNLYIILDNLRSAFNVGAIFRLADTMRVAELFLCGYTAYPPHTKLAKTSLGTIDYVPWRHFPTTMDAVAHCRAQDIHLWGAETTSHSHLYTEVRPPRKVALILGNEALGISEPVLKACD-LLIEIPTFGYKNSLNVATACSVLGYTILEKMEVF 184 The following BLAST results are available for this feature:
BLAST of NO13G02870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02870 ID=NO13G02870|Name=NO13G02870|organism=Nannochloropsis oceanica|type=gene|length=2649bpback to top protein sequence of NO13G02870.2 >NO13G02870.2-protein ID=NO13G02870.2-protein|Name=NO13G02870.2|organism=Nannochloropsis oceanica|type=polypeptide|length=588bpback to top protein sequence of NO13G02870.1 >NO13G02870.1-protein ID=NO13G02870.1-protein|Name=NO13G02870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=580bpback to top Synonyms
Publications
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