NO13G02710, NO13G02710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02710 vs. NCBI_GenBank
Match: EWM21930.1 (Protein of unknown function DUF3611 [Nannochloropsis gaditana]) HSP 1 Score: 397.9 bits (1021), Expect = 2.700e-107 Identity = 221/285 (77.54%), Postives = 241/285 (84.56%), Query Frame = 0 Query: 1 MTSRLLFLGAAAMTLLLSSEAFFFSRMPARLQQASKSPQLALIGHQLSLIPSSISTSKKRFALSSPLKAATLNVDSDPTTSLKNDGLKIELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA 286 ++S L L A++ L A+F S +PARL A ++ L H L L P S+ ++K F + LKAA+LN DSDP +LK+DGLKIELRQ+SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFV+PS G G LAA++IFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAM+RRVVRTAI INLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVIN A GGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA Sbjct: 5 LSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHL-YPRHNLKLAPPSLFATQKGFGVLPALKAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPS-GGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA 287
BLAST of NO13G02710 vs. NCBI_GenBank
Match: XP_005853665.1 (hypothetical protein NGA_0454000 [Nannochloropsis gaditana CCMP526] >EKU22697.1 hypothetical protein NGA_0454000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 396.4 bits (1017), Expect = 7.800e-107 Identity = 220/285 (77.19%), Postives = 241/285 (84.56%), Query Frame = 0 Query: 1 MTSRLLFLGAAAMTLLLSSEAFFFSRMPARLQQASKSPQLALIGHQLSLIPSSISTSKKRFALSSPLKAATLNVDSDPTTSLKNDGLKIELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA 286 ++S L L A++ L A+F S +PARL A ++ L H L L P S+ ++K F + L+AA+LN DSDP +LK+DGLKIELRQ+SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFV+PS G G LAA++IFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAM+RRVVRTAI INLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVIN A GGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA Sbjct: 5 LSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHL-YPRHNLKLAPPSLFATQKGFGVLPALEAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPS-GGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA 287
BLAST of NO13G02710 vs. NCBI_GenBank
Match: CBJ49000.1 (CHloroplast inner membrane protein TIC 21 [Ectocarpus siliculosus]) HSP 1 Score: 136.7 bits (343), Expect = 1.100e-28 Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 0 Query: 90 ELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRR--AVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAA 286 +L++ + +W SWWAQ I +TVA +IL F+N+ + S NI NG A L A SI WTWG+ AK R + E + +R +R ++IN+ G+L AL+GAEQ VG L+A+VL QGF P V+ AG +A + +D+F++QANTN LLSHF SL +SL LL R K+++ A Sbjct: 73 QLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSTRG-------NILGNGVALAVASLACSAASICWTWGYNLKAKGWRNLGTLAEVDDAQVRMRSSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGTAGAAEVAQAQFRALDVFIVQANTNTLLSHFCSLAASLWLLARTPKLAKLA 263
BLAST of NO13G02710 vs. NCBI_GenBank
Match: XP_002183847.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44516.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.0 bits (297), Expect = 2.400e-23 Identity = 79/204 (38.73%), Postives = 113/204 (55.39%), Query Frame = 0 Query: 75 DSDPTTSLKNDGLKIELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLA----MIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLL 275 D +P D + +++ S L +WFSWW+Q+I TV+ VIL F+ S V +A G P+ + ++ + G+ + A SI WTW G R+ R +L PT+ + M RR VR + +NL+GLL L+ AE+ VG L +VL+ + F P G+ G + QP+DI V+QANTN LLSHF SLVS L L Sbjct: 181 DEEPPFQATTD---LVVKETSLVLKRVSWFSWWSQIILTTVSAVILSFSRSVVGRNATVG-PVPS-------FLLSGAGVLISACSIIWTW---GNGARLSRRLLRRPTTRSQAADMFRRAVRVGVTLNLIGLLVTLLAAEEIVGALAIKVLTNRNFGPQAALLGSVEGQL-----QPLDILVVQANTNTLLSHFCSLVSLLYL 365
BLAST of NO13G02710 vs. NCBI_GenBank
Match: XP_002289047.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94483.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 113.6 bits (283), Expect = 1.000e-21 Identity = 77/232 (33.19%), Postives = 129/232 (55.60%), Query Frame = 0 Query: 45 HQLSLIPSSISTSKKRFALSSPLKAATLNVDSDPTTSLKNDGLKIELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKR-IRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAG-GGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLL 275 H + L SS++ R ++ + ++ N+ S + D L ++ SK L +++W SWW+Q+I V+ + F + + + + SPL + S ++ G+ +SI WTWG +A+R +RR+ + ++RRV+ + INL+GLLT+L+GA+ VG L+A+ + V+ G G GG +AS T+QP+D+ V+QANTNIL SHF+S+ L L Sbjct: 40 HTVPLSLSSLTPHHHRVVPTTQPRVSSTNLSSSAFDG-QVDSLVLKA---SKSLTASSWLSWWSQLILTVVSSITFVFARNVM--ESQTVSPLEFSKVASK-FVLPGVGIVTSVMSIIWTWGGRRLARRFVRRSQTSRVEAANLLRRVITVGVTINLIGLLTSLLGAQYIVGTLVAKAMQN------VVGFGGGMGGMVASQTLQPLDVLVVQANTNILTSHFVSMACLLWL 258
BLAST of NO13G02710 vs. NCBI_GenBank
Match: GAX27140.1 (hypothetical protein FisN_13Lh310 [Fistulifera solaris]) HSP 1 Score: 107.8 bits (268), Expect = 5.600e-20 Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 0 Query: 95 SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWG-FTGVAKRIRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSK 281 SK L +WFSWW+QVI +V+GVIL F + + + S + F +G GL + A+SI WTWG + +++R+ R L + M+RR V+ + INL+GLL L+ AE+ VG L VL+ + G VQP+D+ V+QANTN LLSHF SL S LL Y+K Sbjct: 78 SKSLRRVSWFSWWSQVILTSVSGVILGFARRTLVQRSTALSTGGTSSFFLSGI-----GLLVSAVSILWTWGNGSRLSRRLVRRSLPRAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALHVLTSSSSRNAMFPEG---------LVQPLDVLVVQANTNSLLSHFCSLAS----LLFYTK 246
BLAST of NO13G02710 vs. NCBI_GenBank
Match: GAX27601.1 (hypothetical protein FisN_13Hh310 [Fistulifera solaris]) HSP 1 Score: 107.5 bits (267), Expect = 7.300e-20 Identity = 74/187 (39.57%), Postives = 102/187 (54.55%), Query Frame = 0 Query: 95 SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWG-FTGVAKRIRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSK 281 SK L +WFSWW+QVI +V+GVIL F + + S + F +G GL + A+SI WTWG + +++R+ R L + M+RR V+ + INL+GLL L+ AE+ VG L +VL+ + G VQP+DI V+QANTN LLSHF SL S LL Y+K Sbjct: 69 SKSLRRVSWFSWWSQVILTSVSGVILGFARRTLVQRNTALSTGGTSSFFLSGI-----GLIVSAVSILWTWGNGSRLSRRLIRRPLPRAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALQVLTSSSSRNAMFPEG---------LVQPLDILVVQANTNSLLSHFCSLAS----LLFYTK 237
BLAST of NO13G02710 vs. NCBI_GenBank
Match: XP_005833341.1 (translocon at the inner envelope membrane of chloroplast 21 like protein, partial [Guillardia theta CCMP2712] >EKX46361.1 translocon at the inner envelope membrane of chloroplast 21 like protein, partial [Guillardia theta CCMP2712]) HSP 1 Score: 102.8 bits (255), Expect = 1.800e-18 Identity = 74/203 (36.45%), Postives = 101/203 (49.75%), Query Frame = 0 Query: 98 LHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMIR---RVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTV-----------------------QPVDIFVIQANTNILLSHFISLVSSLLL 275 + ++W SWWAQVI + ++ + LFF N+ P G NI +NG A GL L I++ WT G+ +RI LE P + R R VR + + L G+ L+GAEQ VG L+A+ +S S L+ N GG IA+ T Q +DIFV+QANTN LLSH SLV+SL + Sbjct: 1 IRQSSWLSWWAQVILSVISAITLFFANAVRGPMQG--------NILANGVFMAGLGLALSFINVIWTTGY----QRIAAKQLETPEAAMSFRSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAKSISG---SILIAN----GGGIAAQTASLQLQVCSFIDPRQLGFRTECCWQALDIFVVQANTNTLLSHLSSLVNSLFI 184
BLAST of NO13G02710 vs. NCBI_GenBank
Match: CEL92434.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 99.0 bits (245), Expect = 2.600e-17 Identity = 63/199 (31.66%), Postives = 104/199 (52.26%), Query Frame = 0 Query: 90 ELRQFSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGG-----GAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISR 284 +L+ + L + AW+SWW Q+ V+ IL F N+ L NG A + +S+ WT+G+T ++ +RR P ++ I+ +R+ ++INL+GLL +++ AEQ VG L +++L S LV G GG T+QP+DI V+QANTN ++H + L++SL L R ++ + Sbjct: 33 QLQVVRRALWNVAWWSWWPQLALTVVSASILIFANTI-------SEYLTLTQAILNGTALAGVAVFFSILSLIWTYGYTRLSLDLRRTA--PSKAVVSIKHWLRSGVWINLIGLLLSMVSAEQIVGVLFSKILR---MSQLVFGGGPGGVVRFSAPTGGLTLQPLDILVVQANTNTSVAHLVGLLTSLWLATRNERLQQ 219
BLAST of NO13G02710 vs. NCBI_GenBank
Match: NP_001312912.1 (protein TIC 21, chloroplastic-like [Nicotiana tabacum] >XP_009801482.1 PREDICTED: protein TIC 21, chloroplastic [Nicotiana sylvestris] >AIK29632.1 permease in chloroplast [Nicotiana tabacum]) HSP 1 Score: 98.2 bits (243), Expect = 4.400e-17 Identity = 91/285 (31.93%), Postives = 145/285 (50.88%), Query Frame = 0 Query: 14 TLLLSSEAFFFSRMPARLQQASKSPQLALIGHQLSLI--PSSISTSK-KRFALSSP-----------LKAATLNVDSDPTTSLKNDGLKIELRQFSKFLHSTAWF-------SWWAQVICNTVAGVILFFTNSFVSPSAGSGSPLAARNIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTS--LAMIRRVVRTAIFINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINPGAGGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLL 276 TLLL S P+ L A K + +G Q++LI PSS+S S K LS P L +A L S P TS ++ K +L Q +K L +TA + +W Q++C VA VIL F+ V + SP + AGG+ +S+FW++G+ +++++RR EP + A + + ++ I +NLLG+ A++G + VG+L+A+ L+ +P I PG S V +D+F++QA+ N +++HF+ LV SL LL Sbjct: 3 TLLLPSAHSVTGSAPSALSSAGKPCRHNFLGRQITLISSPSSLSLSPLKTKPLSLPQFSLINKRSRILASAPL---SPPYTSPNDESEKAKLAQVAKRLQNTARYFKRLGSLGFWGQLVCTLVAAVILSFS---VVITGNITSPFT--------FYSTAGGIAAAFVSVFWSFGYIRLSEKLRRTANEPSKAPPRADVVKSLKNGIVVNLLGMGAAVLGMQATVGSLVAKALTTSA-NPYSITPG-------SSPVLALDVFLVQASANTIVAHFLGLVFSLELL 265 The following BLAST results are available for this feature:
BLAST of NO13G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02710 ID=NO13G02710|Name=NO13G02710|organism=Nannochloropsis oceanica|type=gene|length=1738bpback to top protein sequence of NO13G02710.1 >NO13G02710.1-protein ID=NO13G02710.1-protein|Name=NO13G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
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