NO13G02450, NO13G02450 (gene) Nannochloropsis oceanica

Overview
NameNO13G02450
Unique NameNO13G02450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3514
Alignment locationchr13:677474..680987 +

Link to JBrowse

Properties
Property NameValue
DescriptionNudix hydrolase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:677474..680987 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR015376Znr_NADH_PPase
IPR015375NADH_PPase-like_N
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of NO13G02450 vs. NCBI_GenBank
Match: GAQ80262.1 (putative NUDIX hydrolase domain [Klebsormidium nitens])

HSP 1 Score: 203.8 bits (517), Expect = 1.000e-48
Identity = 114/276 (41.30%), Postives = 156/276 (56.52%), Query Frame = 0
Query:  146 GWAFAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLT------EEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRAC--TSCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAG-------------AKELVVSAALDPT--GE----------NPGGLSIPGPYAIAHHLIKHWL 388
            G   A    +  +  +E  A  +G     +  +R L+   T      +ED+A+ G   ++L WH  +Q+CG CG+   +V+ G RR C   SCR + YPR+DPVVI  V D  RD++LLGR   +   M+SCLAG++   ESLEEAVRRE +EE GI +GDV++HSSQPWP+G G   CQ+MVG+ A A +++I++D  EL D RWF+R+EV               A+E +  A  D    GE           P  L +PG YAIAHHLI  WL
Sbjct:  117 GGKSASSSGRSDERALEKFAAPSGGYQTAYLDLRTLMMATTFGNAERKEDLAIVGYARALLGWHAINQYCGKCGTKTASVQFGLRRVCQQDSCRLKLYPRIDPVVIMCVVDKERDVILLGRGARHPNNMYSCLAGFIEPGESLEEAVRRETREEVGIEIGDVVHHSSQPWPVGFGTQQCQLMVGFFAFAKTVEINVDEAELADARWFTRSEVRAAFSEEVYGSAQRDAQEKIAKACFDRVEGGEAKIADLRGRTEPSALFVPGAYAIAHHLILAWL 392          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: ADM52965.1 (nudix hydrolase [Triticum aestivum])

HSP 1 Score: 203.0 bits (515), Expect = 1.800e-48
Identity = 121/286 (42.31%), Postives = 155/286 (54.20%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-----------------KELV--------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            +AVDVS    E   ++   AGE +  F  +R L+      D      +AVAG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S+DI +D  ELED +W SR +V  A                 K++          S+ L    E P  + +PGPYAIAHHLI  W     P+  S   N
Sbjct:  120 WAVDVS----EVEGARFGGAGEESA-FVDLRTLMVAADWRDKDAMGELAVAGHARALLEWHNTAKFCGACGAKAVPTEAGTRKQCSNESCKKRIYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVIYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVKQICKGAERGQSTSSDLRVESEEPAPMFVPGPYAIAHHLISSWAFEGAPKVPSSFSN 400          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_017238000.1 (PREDICTED: nudix hydrolase 19, chloroplastic-like [Daucus carota subsp. sativus] >KZN00447.1 hypothetical protein DCAR_009201 [Daucus carota subsp. sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.800e-48
Identity = 133/373 (35.66%), Postives = 197/373 (52.82%), Query Frame = 0
Query:   59 ELKEVAAFESALKTDGAAFALFHGTSA------LITKERQTKIVYQTGDMLQ--KLYGISIEQLQPTNKSSRLTTSGNSSSAPYFPCVALGASVSGWA--FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAV------LTEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWL 388
            +L +  +F SA +T  A F+  HGT        ++   +   +V  +GD++    L  +S+ + Q     SR+  + NS        V LG+ ++     +A+DVS     D+E++     ++ + F  V +L+        L   D+A+AG   ++L WH     CG CG   + ++ G R+ C+  SC+ R YPRVDPVVI LV D  RD  LL RQ  + P M+S LAG++   ESLEEAV+RE  EE+GI VG+V+YHSSQPWP+G  +  CQ+MVG++A A S +I++D +ELED +WFSR +V  A                         K   +S   +        + IPGPYA+AHHLI  W+
Sbjct:   21 KLTDSVSFSSAFQTLKAYFSSDHGTQGSCPNFKVLPFRKGRPLVGSSGDLVPTWHLGWLSLSECQAFLGKSRVKLTENS-------FVYLGSELADEVVFWAIDVSDAG--DLENE---MSDMQLSFVDVMSLMVATDWTNQLVMADLAIAGQAKALLEWHITSCFCGKCGEKTVPIDAGRRKQCSNESCKKRIYPRVDPVVIMLVVDKQRDRALLSRQSKFVPRMWSTLAGFIEPGESLEEAVKRETWEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFLAYAKSFEINVDKNELEDAQWFSREDVKKALTFAEYEKAQTTTAVKVKQMSKGVEKSFNLSLDFNMESGELASMFIPGPYAVAHHLIASWV 381          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_020185384.1 (nudix hydrolase 19, chloroplastic [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 203.0 bits (515), Expect = 1.800e-48
Identity = 117/286 (40.91%), Postives = 148/286 (51.75%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            +AVDVS     +VE            F  +R L+      D      +A+AG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S+DI +D  ELED +W SR +V  A                              S+ L    E P  + +PGPYAIAHHLI  W     P+  S   N
Sbjct:  160 WAVDVS-----EVEGARFGGAGEGSAFVDLRTLMVAADWRDKDAMGELAIAGHARALLEWHNTAKFCGACGAKAVPTEAGTRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVIYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGQSTSSDLSVESEEPAPMFVPGPYAIAHHLISSWAFEGAPKVPSSFSN 440          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: NP_001149422.1 (hydrolase, NUDIX family protein [Zea mays] >ACG35392.1 hydrolase, NUDIX family protein [Zea mays])

HSP 1 Score: 202.6 bits (514), Expect = 2.300e-48
Identity = 123/303 (40.59%), Postives = 162/303 (53.47%), Query Frame = 0
Query:  138 VALGASVSGWA------FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA--------KELVVSAALD------PTGENPGG-----------LSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            V LGA V G        +AVDVS+     V   A+  G  A  F  +R L+      D      +A+AG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPR+DPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S++I++D  ELED +W +R +V  A         +   +A +D        G+NP             + +PGPYAIAHHLI  W     P+  S   N
Sbjct:   96 VFLGALVEGDGKEAAAYWAVDVSEGEGARVGGPADGDGPSA--FVDLRTLMVATDWSDKDAMAELAIAGHARALLEWHSTAKFCGACGAKAVPTEAGRRKQCSNDSCKKRIYPRIDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVVYHSSQPWPVGPNTMPCQLMVGFFAYAKSLEINVDKQELEDAQWHNREDVKKALTFAEYEKAQRTSAAKVDQICKGAEKGQNPSADFKVGSGEPAPMFVPGPYAIAHHLISSWAFEGAPKLPSSFSN 396          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: AQL02222.1 (Zinc finger protein [Zea mays])

HSP 1 Score: 202.6 bits (514), Expect = 2.300e-48
Identity = 123/303 (40.59%), Postives = 162/303 (53.47%), Query Frame = 0
Query:  138 VALGASVSGWA------FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA--------KELVVSAALD------PTGENPGG-----------LSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            V LGA V G        +AVDVS+     V   A+  G  A  F  +R L+      D      +A+AG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPR+DPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S++I++D  ELED +W +R +V  A         +   +A +D        G+NP             + +PGPYAIAHHLI  W     P+  S   N
Sbjct:   96 VFLGALVEGDGKEASAYWAVDVSEGEGARVGGPADGDGPSA--FVDLRTLMVATDWSDKDAMAELAIAGHARALLEWHSTAKFCGACGAKAVPTEAGRRKQCSNDSCKKRIYPRIDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVVYHSSQPWPVGPNTMPCQLMVGFFAYAKSLEINVDKQELEDAQWHNREDVKKALTFAEYEKAQRTSAAKVDQICKGAEKGQNPSADFKVGSGEPAPMFVPGPYAIAHHLISSWAFEGAPKLPSSFSN 396          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EMS48510.1 (Nudix hydrolase 19, chloroplastic [Triticum urartu])

HSP 1 Score: 201.8 bits (512), Expect = 3.900e-48
Identity = 104/233 (44.64%), Postives = 132/233 (56.65%), Query Frame = 0
Query:  189 DIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQ 394
            ++A+AG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S+DI +D  ELED +W SR +V  A                              S+ L    E P  + +PGPYAIAHHLI  W     P+
Sbjct:    3 ELAIAGHARALLEWHNTAKFCGACGAKAVPTEAGTRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVIYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGTERGQSTSSDLRVESEEPAPMFVPGPYAIAHHLISSWAFEGAPK 235          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_003557199.1 (nudix hydrolase 19, chloroplastic [Brachypodium distachyon] >KQK19885.1 hypothetical protein BRADI_1g51060v3 [Brachypodium distachyon])

HSP 1 Score: 201.4 bits (511), Expect = 5.100e-48
Identity = 104/243 (42.80%), Postives = 134/243 (55.14%), Query Frame = 0
Query:  186 TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            T  ++A+AG   ++L WH   + CG CG+  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG+V+YH SQPWP+G     CQ+MVG+ A A S+DI +D  ELED +W SR +V  A                              S+ L    +    + +PGPYAIAHHLI  W     P+  S   N
Sbjct:  151 TMGELAIAGHARALLEWHNTAKFCGACGAKAVPTEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETLEETGIEVGEVIYHGSQPWPVGPNTMPCQLMVGFFAYAKSLDICVDKQELEDAQWHSREDVKKALTFAEYEKAQRSNALKVNQICKGAERGQNTSSGLGVESQEAAPMFVPGPYAIAHHLISSWAFEGAPKVPSSFSN 393          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: KNA13558.1 (hypothetical protein SOVF_115600 [Spinacia oleracea])

HSP 1 Score: 201.4 bits (511), Expect = 5.100e-48
Identity = 115/284 (40.49%), Postives = 153/284 (53.87%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGG 399
            +A+DVS+  K       +  G+    F  +R L+            D+AVAG   ++L WH   + CG CG   + +E G R  C++  C+ R YPRVDPVVI LV D   D  LL RQ  Y P M+SCLAG++   ESLEEAVRRE  EE+GI VG+V+YHSSQPWP+G  +  CQ+MVG+ A A S++IS+D DELED +W SR +V  A                             +S+  +        + IPGPYAIAHHLI +W+    P  +  G
Sbjct:  147 WAIDVSEDDK-----LVDELGKKYFSFVELRTLMVATDWSDSRAMADLAVAGHARALLEWHGTSRFCGHCGCKTVLMEAGKRVQCSNELCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRYVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPSSMPCQLMVGFYAYAKSLEISVDKDELEDAQWHSREDVKKALTFAEYEKAQRTAAFKVEQICKGVTQNQNLSSDFNTESGELASMFIPGPYAIAHHLISNWVFQGVPVSSCDG 425          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_010688038.1 (PREDICTED: nudix hydrolase 19, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 200.7 bits (509), Expect = 8.800e-48
Identity = 117/285 (41.05%), Postives = 153/285 (53.68%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGR 400
            +A+DVS+  K       +  G+    F  +R L+            D+AVAG   ++L WH   + CG CGS  I +E G R  C+  SC+ R YPRVDPVVI LV D   D  LL RQ  Y P M+SCLAG+    ESLEEAVRRE  EE+GI VG+V+YHSSQPWP+G  +  CQ+MVG+ A A S++I++D DELED +W SR +V  A                             +S+  +        + IPGP+AIAHHLI  W+    P  +S  R
Sbjct:  143 WAIDVSEDDK-----LVDELGKKYFSFVELRTLMVATDWCDPNAMADLAVAGHARALLEWHGLSRFCGHCGSTTIPMEAGRRVQCSNESCKKRIYPRVDPVVIMLVIDRENDRALLSRQSRYVPRMWSCLAGFTEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEINVDKDELEDAQWHSREDVKKALSFAEYEKAQKTASAKVEQICKGVKQSQNLSSDFNTESGELAPMFIPGPFAIAHHLISTWVFQGAPVSSSDSR 422          
The following BLAST results are available for this feature:
BLAST of NO13G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAQ80262.11.000e-4841.30putative NUDIX hydrolase domain [Klebsormidium nit... [more]
ADM52965.11.800e-4842.31nudix hydrolase [Triticum aestivum][more]
XP_017238000.11.800e-4835.66PREDICTED: nudix hydrolase 19, chloroplastic-like ... [more]
XP_020185384.11.800e-4840.91nudix hydrolase 19, chloroplastic [Aegilops tausch... [more]
NP_001149422.12.300e-4840.59hydrolase, NUDIX family protein [Zea mays] >ACG353... [more]
AQL02222.12.300e-4840.59Zinc finger protein [Zea mays][more]
EMS48510.13.900e-4844.64Nudix hydrolase 19, chloroplastic [Triticum urartu... [more]
XP_003557199.15.100e-4842.80nudix hydrolase 19, chloroplastic [Brachypodium di... [more]
KNA13558.15.100e-4840.49hypothetical protein SOVF_115600 [Spinacia olerace... [more]
XP_010688038.18.800e-4841.05PREDICTED: nudix hydrolase 19, chloroplastic [Beta... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001649NSK001649Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02450.1NO13G02450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100070g22gene8527Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02450.1NO13G02450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02450 ID=NO13G02450|Name=NO13G02450|organism=Nannochloropsis oceanica|type=gene|length=3514bp
GCATTTATCTGACAATTGTACTTCTCATCGATTTTCTGCAAGCCTCTTCA
TGTCTTCGTGACGTTAGTCGCTCGGGGGGGTGTCTCACTATAAACATCCA
ATCCTATTTCGTTCGCTCTGTTCAAGCATCATGTTCCTTTCTTTGCCACT
CTACAACTACGTTCTTTTATTTCTGTGTTTGTGTGTATCCCTTCATCGTC
TCCTTTTCAATACTCTCTTTCAATCTCCTCCACTCCTTCCTCCGCAACTA
TATTCACGCGGAAAAGGGGTCCAATTCCGAAGGTCGCCATCACATGATGT
TGGGTCCTCGCCATTCCCCTCGTGGAAAGCGGAGAAGAGTCTCATTATCC
ATTCACTCCTCCATTTCCCCCCCAACCAGGCCTAAAACCCCTCCTCCTCA
AATTTGACCGCCTCATCCTTTAAAGCTGGTCGCCGCATTCCCCAAAATCG
CGCCAAAGGCACCCCTTCCCCTTCATTCGATTCACCACAAAATGTAAACA
GCCAGCCCAAATGTAAGCTGCATCGCCAACAATAAGCAATCGTCCACGCA
TACCCTTTAAACCACGAATTGTCCCTCTCGGGCTCCCCTTCCAACGCTAC
TGCCTCTTCCCCCACATCTGCCCCTTTCAGCAGCTCTCGCAGCGTCAACG
TCTGGTGCACGATTCCCGCAGGATTACTGTACGCCCCCACCGTACCCTCC
GCACCAGGCACGCTAAAAACGGCATCTTTGCTCGCCATGGGATTATCGCA
TCCCGCGCAGCAAAGCCTGCGTTCCGCTGTGTTTTTCAGTAATTCGATCT
CTTTTCGAAGCCTGTACACAGCTGATTCCATCGACAGCAACTCCTGTCGT
GCTATGTCGTCAAGTGGTAAATTGGCAGCCAAGCGAAATGAAAACGCCAC
CGGTTCCACCGTCAAACCTGCAATGTCCTCCCCCCCTCTGCCGTGCCTTT
CGCCTTCTCCTTCTTGGCTCTCCAGCAAGCGCGTGAATGCCAAACCGGAC
GCACCCATAATCCCCTCCCAAGCCGCCACCGATTGGATGATGCCCTGTGC
TTTCTGCACCAAATTGGGAGCATATAAAAAGCTCGATCGAAACCAGTACA
TTGATTGGTGTTGCTTGATGGCTGCCGTACTCAGGGGTCTTTGCCATTGT
GGCAAGCGCGGTGGTGCTATGATGCAGTCCTCGGGGAGAATGCGGACATG
AGCGTGTGGGACTCCATGACGCGTCTCCATATTCCGATCTCCATCGAGGT
CTAGAAATTGAAACCGTTGACGGCCCCGTGTCTGAACAACAAATGCGCTG
TGGCCATCCCATTCTGATTCCATCTCGACAAGTTCGCATGTGCAACCCAC
TCTCGCTGTGCCTCGGCCGGACTCAAAACGCGCGTTGAGAATGCCGAGAA
AGGCTGCTTGACCCCCTCGTTGTGCCGAAGCAATCGCGAGGACAAGACGG
ATGTGGTGAAGTTTCCAGAGTCGTAATGGCAACGTCTCACCCGGAAAAAG
CACGACTTGGGGCAGAATCAGCAGGGGAAGTTCCATCACAGTGTTAGCAG
GGAGTAAGTGAGCCCGCGTCAGGCTCTCCATTCTGCAGCGTCCGATGGGA
CTCACAGTGTATAACGTTCTTCAGGTGTGTTCAGCAGCAACGTGAATGGG
CTGTCCTTGCATCCTGTGTTGAGATAGCCAGCATCTCTGGTGCATGCAGG
GAGATGGATTCGATGAGAAAGTGATCCCGTTGCTTCGGGTTTTTGGGGAA
GGGTTGGTTGCTGTGTCGGGGGGAGGTTGGAGAGTTATGAGTTATGCCGA
TGTCCTCGAGGCGACCAAACGCATGCTAGGATTTCACGTCCAGCCCTAAG
GAATCCCAGTACTTTTGGGGGGGGCATTCGTTTTCTTCGCCTCAGGTAGC
GTCTGCCCGCAAAGACGGCAGCCAACTGGAGCGTACCCGGCCCGTTGCGC
TCGATTCTCCCACACCGCTCTCGCTCACATTCTGATATAAATAAATATAT
ATATATATTTATATACCCACAATATGTACACAGGAGTGTAGGAGAGCGTC
CTCTTCTAGGGTTAAGTGCATGTGGAGGACAGGGCTTGGCATTTTGATGT
TTTGGGCCCGCTTTTCCAAGGCCTCCTTCATTGCCTCACCGTACACTGTC
GACAGCATCAAAGCTATGGCCTCCCGCCGCACTCCGCTTGGCATCGCGCA
CACCTTCAGCGGCTTGGGGCTGGACCGCAGCCGCGTGGAGACGGAGCTGA
AAGAGGTGGCGGCCTTTGAAAGTGCACTGAAAACCGATGGCGCGGgtacg
tggttaaggacgagaggtcggcagagccggtgtgtgggttgtactagcgc
acactttattctacgcataccgcctttctagcccgacagcacaccgataa
acaaatccattttaatctgaagctgataggcacacaaaatcgaaagccca
ccaatcgtccgcatcatccacgttttatgcctccccatctccgtttccct
tccttccgcagCCTTTGCCTTGTTCCACGGAACGTCAGCCCTAATCACGA
AAGAGAGACAAACCAAGATTGTCTATCAGACTGGCGACATGCTCCAAAAG
CTTTATGGAATTTCCATCGAACAACTGCAGCCAACCAACAAAAGCAGCAG
ACTAACCACCAGCGGTAATAGCTCTTCTGCACCATACTTTCCGTGTGTCG
CGCTCGGTGCATCCGTGAGCGGATGGGCTTTCGCCGTAGATGTCTCCAAG
CGATCCAAAGAGGATGTGGAGAGCAAGGCAGAGGCAGCTGGAGAAGTCGC
CGTCCAGTTTGAACCCGTACGGGCGCTGTTAGCAGTCCTCACGGAAGAGG
ACATTGCAGTGGCAGGGCTGGGTGCGTCTATTTTGGCCTGGCACCGTCAG
CACCAGCACTGTGGAGTGTGTGGCAGTCCAATGATAGCGGTGGAAGGAGG
AGGGCGTCGCGCCTGTACAAGCTGCCGAAATCGCGCGTATCCGCGCGTTG
ATCCCGTCGTAATTGCTTTGGTGACGGACCCTGCGAGGGATATGGTGTTG
TTAGGACGTCAGAGAGTGTATCGGCCCGGGATGTTCTCATGTTTAGCTGG
GTACGTGAGTCAGTGCGAAAGCTTGGAGGAGGCTGTACGAAGAGAGGTAA
AGGAAGAATCAGGAATCAGCGTGGGGGATGTAATGTATCACAGCTCGCAG
CCCTGGCCGATTGGGCGGGGGGCGTCGTGTCAGATAATGGTGGGCTATAT
CGCGACTGCTACCAGTATGGATATCTCCATGGACACGGACGAACTGGAGG
ATTGCCGGTGGTTTTCTCGGGCCGAAGTGGCGGGCGCAAAGGAGCTGGTT
GTGTCCGCAGCGTTGGACCCAACGGGGGAAAACCCGGGTGGGTTGAGTAT
TCCTGGGCCTTACGCGATAGCGCATCATTTGATCAAGCACTGGCTGTTGA
CGACGACGCCGCAAGAAGCGTCAGGAGGACGTAATAAATTATGAAAAATG
TATTTGGGCCGAGG
back to top

protein sequence of NO13G02450.1

>NO13G02450.1-protein ID=NO13G02450.1-protein|Name=NO13G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MWRTGLGILMFWARFSKASFIASPYTVDSIKAMASRRTPLGIAHTFSGLG
LDRSRVETELKEVAAFESALKTDGAAFALFHGTSALITKERQTKIVYQTG
DMLQKLYGISIEQLQPTNKSSRLTTSGNSSSAPYFPCVALGASVSGWAFA
VDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASIL
AWHRQHQHCGVCGSPMIAVEGGGRRACTSCRNRAYPRVDPVVIALVTDPA
RDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVM
YHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAG
AKELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN
KL*
back to top
Synonyms
Publications