NO13G02310, NO13G02310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_004231298.1 (PREDICTED: Werner Syndrome-like exonuclease [Solanum lycopersicum]) HSP 1 Score: 109.8 bits (273), Expect = 2.600e-20 Identity = 63/185 (34.05%), Postives = 101/185 (54.59%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T++ V AN W + + L K SG VGLD EWKPTF ++++A LQL CL++QL L +P+ L++ LA+P + VGV V +D+ KL+ ++G+V + + D+ V + F ++++A+++ G+ + K D + NWE LS QVEYA +DA A I Sbjct: 23 QTIETTVTNKAAVANEWANAM---LSKYSGRQ---KVVGLDSEWKPTF-----SNKSATLQLCIANTCLIVQLFYLDEIPQSLKKFLANPNFVFVGVEVAEDILKLKNEYGLVCNSHEDIRDVAMNKW--PGRFSRPGLKDLASAISGLYMTKPDHVCQSNWEASVLSEAQVEYACIDAYASYKI 194
BLAST of NO13G02310 vs. NCBI_GenBank
Match: CDM81772.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 109.4 bits (272), Expect = 3.400e-20 Identity = 64/187 (34.22%), Postives = 95/187 (50.80%), Query Frame = 0 Query: 115 HSGPRQYETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDV-GRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDA 301 H+ P + V DT A+ W R +R + P G G VGLD EWKP + + S+ A+LQL CLV+Q+ VP +R +L DP + VG+ V +D AKL D+G+V + VD+ GR L R + ++ A + G+ + K + + NWE +L QV+YA +DA Sbjct: 6 HTVPFGSALINTTVTSDTGAADEWVRR----VRAANDPAGRGLIVGLDCEWKPNY-SSWTTSKVAILQLCVGTSCLVLQMFYANRVPAAIRSLLGDPAVRCVGIGVGEDAAKLADDYGLVCASPVDLEGRCNEYLGIGGLGRRRLGLKGYAREVLGLTMEKPRHVTMINWERRQLDVAQVQYACIDA 187
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_020616399.1 (uncharacterized protein LOC110054354 [Orbicella faveolata]) HSP 1 Score: 108.6 bits (270), Expect = 5.800e-20 Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 0 Query: 153 DGGGGAVGLDLEWKPTFRARQ---AASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIYQ 309 D AVG D+EWKP + +++ ++ AVLQL CLV+ L ++ P+ LR +L D +LKVG + D+ KL+RD G++ G VD ++ + N R + ++ +A GI+L K ++ NWE+ L+ +Q+ YAALDA G IYQ Sbjct: 397 DCSAQAVGFDIEWKPQYVSKKKGGVENKTAVLQLGVESSCLVLHLYNMKSPPQLLRSVLNDKKILKVGSGILQDVVKLKRDTGLICLGMVDTQKMAKSM--GTNAPRKLGLKALAQHFLGINLEKPKSVSRSNWENYPLTIRQIHYAALDAWIGLKIYQ 553
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_015081936.1 (PREDICTED: Werner syndrome ATP-dependent helicase homolog [Solanum pennellii]) HSP 1 Score: 108.2 bits (269), Expect = 7.500e-20 Identity = 63/185 (34.05%), Postives = 100/185 (54.05%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T++ V AN W + + L K SG VGLD EWKPTF + ++++A LQL CL++QL L +P+ L++ LA+P + VGV V +D+ KL+ ++G+V + Y D+ + F ++++A+ + G+ + K D + NWE LS QVEYA +DA A I Sbjct: 23 QTIETTVTNKAAVANEWANAM---LSKYSGRQ---TVVGLDNEWKPTF-SPYTSNKSATLQLCIDSSCLIVQLFYLDEIPQILKKFLANPNFVFVGVEVAEDILKLKNEYGLVCNSYDDIRDFAMNEW--PGRFSRPGLKDLASEICGLRMTKPDHVCQSNWEASVLSEAQVEYACIDAYASYKI 198
BLAST of NO13G02310 vs. NCBI_GenBank
Match: KXG32361.1 (hypothetical protein SORBI_3003G143300 [Sorghum bicolor]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 0 Query: 124 VKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDV-GRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDA 301 + V +D A+ W + + + P G VGLD EWKP +R+ S+ A+LQL CLV+QL + VP +R LADP +L VG+ V +D+AKL D+G+ + +VD+ R L + R + ++ A + G+ + K + + NWE +L Q+ YA +DA Sbjct: 23 IDTTVTRDAAVADDWVRTV-----RAANPRGARLIVGLDCEWKPNYRS-WTTSKVAILQLCAGTRCLVLQLLYVDRVPASVRSFLADPDVLFVGIGVGEDVAKLDADYGLTCAAHVDLESRCNDYLGRYTGVGRRLGLKGYAEEVLGLFMEKPRGVTMSNWEKHDLEEAQIRYACIDA 194
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_021311809.1 (Werner Syndrome-like exonuclease [Sorghum bicolor]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 0 Query: 124 VKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDV-GRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDA 301 + V +D A+ W + + + P G VGLD EWKP +R+ S+ A+LQL CLV+QL + VP +R LADP +L VG+ V +D+AKL D+G+ + +VD+ R L + R + ++ A + G+ + K + + NWE +L Q+ YA +DA Sbjct: 23 IDTTVTRDAAVADDWVRTV-----RAANPRGARLIVGLDCEWKPNYRS-WTTSKVAILQLCAGTRCLVLQLLYVDRVPASVRSFLADPDVLFVGIGVGEDVAKLDADYGLTCAAHVDLESRCNDYLGRYTGVGRRLGLKGYAEEVLGLFMEKPRGVTMSNWEKHDLEEAQIRYACIDA 194
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_015081928.1 (PREDICTED: Werner Syndrome-like exonuclease [Solanum pennellii]) HSP 1 Score: 107.1 bits (266), Expect = 1.700e-19 Identity = 62/186 (33.33%), Postives = 98/186 (52.69%), Query Frame = 0 Query: 124 VKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIYQE 310 ++ V AN W A +L K SG VGLD EWKP F ++ ++ A LQL CL++QL L +P+ L++ LA+P VGV V +D+ KL+ ++G+V D+ V + + + ++++A + +++PK + + NWE ELS QVEYA +DA A I Q+ Sbjct: 25 IETTVTNKAAVANEWA---ASMLSKYSGKQ---TVVGLDNEWKPNF-SKYTNNKLATLQLCIDNTCLIVQLFYLDEIPQTLKRFLANPNFTFVGVEVGEDILKLKNEYGLVCYNQADIRDVAKKKW--PCRYSRPGLKDLAYDICSLNMPKPKHVSMSNWEARELSVSQVEYACIDAYASFKIGQK 201
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_016581900.1 (PREDICTED: Werner Syndrome-like exonuclease [Capsicum annuum] >PHT63067.1 hypothetical protein T459_33087 [Capsicum annuum]) HSP 1 Score: 107.1 bits (266), Expect = 1.700e-19 Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 0 Query: 122 ETVKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAI 307 +T+ V N W S + L K +G VGLD EW+PTF + ++++A LQL CL++QL L +P+ L++ LA+P + VGV V +D++KL+ ++G+V S D+ V + F ++ +A+ + G+ +PK + NWE LS QVEY +DA A I Sbjct: 18 QTIVTTVTSKAAVVNEWASEM---LSKYAGKQ---TVVGLDSEWRPTF-SPYTSNKSATLQLCIDNTCLIVQLFYLDEIPQVLKKFLANPNFIFVGVEVAEDISKLKNEYGLVGSSMADIRDVAKNKW--PGRFSRPGLKELASDICGLYMPKPKHVCQSNWEARFLSEAQVEYGCIDAYASYKI 193
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_020606340.1 (Werner Syndrome-like exonuclease [Orbicella faveolata]) HSP 1 Score: 106.7 bits (265), Expect = 2.200e-19 Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 0 Query: 159 VGLDLEWKPTFRARQ---AASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDVGRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDAMAGRAIY 308 VG D+EW+P F +++ ++ AVLQL CLV+ + + +PR L IL D +LKVGV +++D +KLRR G+V G D+ ++ + ++ +A GI+L KS I + NWE+ L+ +Q+EYAALDA AG Y Sbjct: 99 VGFDIEWRPQFVSKRDGGTENQTAVLQLGVEASCLVLHIFHMNELPRLLISILGDENILKVGVGIEEDASKLRRHRGLVCEGMTDI----QKMVQTTERGQQFGLKALAQRFLGIELEKSKRITMSNWENFPLTLRQIEYAALDAWAGVKTY 246
BLAST of NO13G02310 vs. NCBI_GenBank
Match: XP_004971519.1 (Werner Syndrome-like exonuclease [Setaria italica]) HSP 1 Score: 105.5 bits (262), Expect = 4.900e-19 Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 0 Query: 124 VKVAVIQDTTCANYWCSRLAHVLRKESGPDGGGGAVGLDLEWKPTFRARQAASRAAVLQLSGPGLCLVIQLQQLRHVPRQLRQILADPTLLKVGVSVDDDLAKLRRDWGMVSSGYVDV-GRVGGRLFFHDNPFRTMSVQNMAASLWGIDLPKSDAIRLGNWEHPELSTKQVEYAALDA 301 + V +D A+ W + + + P G VGLD EWKP + S+ A+LQL CL++QL + +P +R +LADP + VG+ V +D AKL D+G+ + VD+ GR L + R + ++ A + G+ + K + + NWE +L Q++YA +DA Sbjct: 29 IDTTVTRDAAAADEWVRAV-----RAASPRGAPLIVGLDCEWKPNY-CSWTTSKVAILQLCAGARCLILQLLYVDRIPASVRGLLADPDVRLVGIGVGEDAAKLAADYGLECAAPVDLEGRCNDHLGLYGGGGRRLGLKGFAREVLGLVMEKPRHVTMSNWEKHDLDVAQIQYACIDA 200 The following BLAST results are available for this feature:
BLAST of NO13G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02310 ID=NO13G02310|Name=NO13G02310|organism=Nannochloropsis oceanica|type=gene|length=2578bpback to top protein sequence of NO13G02310.1 >NO13G02310.1-protein ID=NO13G02310.1-protein|Name=NO13G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top Synonyms
Publications
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