NO13G02200, NO13G02200 (gene) Nannochloropsis oceanica

Overview
NameNO13G02200
Unique NameNO13G02200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1719
Alignment locationchr13:617154..618872 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:617154..618872 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO13G02200 vs. NCBI_GenBank
Match: EWM21877.1 (hypothetical protein Naga_100159g13 [Nannochloropsis gaditana])

HSP 1 Score: 764.2 bits (1972), Expect = 2.800e-217
Identity = 390/539 (72.36%), Postives = 458/539 (84.97%), Query Frame = 0
Query:   38 PRQRTRPLHARDGAGDKERIAKFLRLKKIKEGGGDYNRLVEEGAGSSNALDEDF-YYDDDKNGDAAVGNLGDYSAEDKEMYDNLKRQEKQALVDKILKA---KEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVGISFDTINAALRAIHQEILRSDDSAGGPKRRLAPLPEEELDGRWRCRVTSYQENVQFLTKLNVWQRVETVAGTITGQLVVAPFEVIRDVNLKYTFDPLARVLNYGEQDKMASTFGLPTGLPHTLRVLAISDTLMVTARSSDKKGSTPRASYDARFAIWTRAG 573
            P++   PL+A  G GDKER+AK LRLKKIKEGGGDYNRL++ G   S    ED+ Y+D+D N DAA+ +  +Y+AED+EMY+ LKRQEKQAL+DKILK+                      GQPSPYL+RK++Q Q+VE+RFQ VETYKPQS+SWGEFARPKNIP+AFGGGVHIPEGGV+L+GDKEWLAKYD LMAQVREYKK VQGTVLTPLE+ DEERI VAR QARKYMLRGEYEAAK VLLPFR+ICSVRS+LGASTLMDLAMA+EA+YEFKEAQ+IYTQVRSSPVKDLR KAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQI+GSYGLYMKG S+ + DD+ +  RIESVAQALE+LEDAVIAQGVG+ FD INAALR +HQ++LRSD ++ GP RRLAP+P ++LDGRWRCR+T++QE+V FLTK++VWQRVE+   TITG+LVV+PFEV+RDV + +TFD   RVLNYG +  MAST G+PTGLPHTLRVLAI+DT++VTARSSD KG+TP+ SY+ARFA+WTRAG
Sbjct:   34 PKRHLHPLYA-GGGGDKERVAKLLRLKKIKEGGGDYNRLLDGGVSGSEGGQEDYRYWDNDANDDAALPDSSEYTAEDQEMYNELKRQEKQALLDKILKSXXXXXXXXXXXXXXXXXXXXXXGQPSPYLARKLQQLQDVEKRFQNVETYKPQSTSWGEFARPKNIPDAFGGGVHIPEGGVTLEGDKEWLAKYDTLMAQVREYKKGVQGTVLTPLEKADEERIKVARTQARKYMLRGEYEAAKAVLLPFRSICSVRSSLGASTLMDLAMAHEAVYEFKEAQDIYTQVRSSPVKDLRAKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIEGSYGLYMKGKSSPSPDDSMSGLRIESVAQALEVLEDAVIAQGVGVRFDAINAALRVVHQDVLRSDFASEGPSRRLAPVPVQDLDGRWRCRLTAHQESVDFLTKVDVWQRVESETRTITGKLVVSPFEVVRDVKVAFTFDGTGRVLNYGVEGSMASTLGIPTGLPHTLRVLAITDTMLVTARSSDAKGTTPKESYEARFAVWTRAG 571          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005856327.1 (hypothetical protein NGA_2010400, partial [Nannochloropsis gaditana CCMP526] >EKU20030.1 hypothetical protein NGA_2010400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 708.4 bits (1827), Expect = 1.800e-200
Identity = 360/488 (73.77%), Postives = 422/488 (86.48%), Query Frame = 0
Query:   89 EDF-YYDDDKNGDAAVGNLGDYSAEDKEMYDNLKRQEKQALVDKILKA---KEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVGISFDTINAALRAIHQEILRSDDSAGGPKRRLAPLPEEELDGRWRCRVTSYQENVQFLTKLNVWQRVETVAGTITGQLVVAPFEVIRDVNLKYTFDPLARVLNYGEQDKMASTFGLPTGLPHTLRVLAISDTLMVTARSSDKKGSTPRASYDARFAIWTRAG 573
            ED+ Y+D+D N DAA+ +  +Y+AED+EMY+ LKRQEKQAL+DKILK+                      GQPSPYL+RK++Q Q+VE+RFQ VETYKPQS+SWGEFARPKNIP+AFGGGVHIPEGGV+L+GDKEWLAKYD LMAQVREYKK VQGTVLTPLE+ DEERI VAR QARKYMLRGEYEAAK VLLPFR+ICSVRS+LGASTLMDLAMA+EA+YEFKEAQ+IYTQVRSSPVKDLR KAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQI+GSYGLYMKG S+ + DD+ +  RIESVAQALE+LEDAVIAQGVG+ FD INAALR +HQ++LRSD ++ GP RRLAP+P ++LDGRWRCR+T++QE+V FLTK++VWQRVE+   TITG+LVV+PFEV+RDV + +TFD   RVLNYG +  MAST G+PTGLPHTLRVLAI+DT++VTARSSD KG+TP+ SY+ARFA+WTRAG
Sbjct:    5 EDYRYWDNDANDDAALPDSSEYTAEDQEMYNELKRQEKQALLDKILKSXXXXXXXXXXXXXXXXXXXXXXGQPSPYLARKLQQLQDVEKRFQNVETYKPQSTSWGEFARPKNIPDAFGGGVHIPEGGVTLEGDKEWLAKYDTLMAQVREYKKGVQGTVLTPLEKADEERIKVARTQARKYMLRGEYEAAKAVLLPFRSICSVRSSLGASTLMDLAMAHEAVYEFKEAQDIYTQVRSSPVKDLRAKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIEGSYGLYMKGKSSPSPDDSMSGLRIESVAQALEVLEDAVIAQGVGVRFDAINAALRVVHQDVLRSDFASEGPSRRLAPVPVQDLDGRWRCRLTAHQESVDFLTKVDVWQRVESETRTITGKLVVSPFEVVRDVKVAFTFDGTGRVLNYGVEGSMASTLGIPTGLPHTLRVLAITDTMLVTARSSDAKGTTPKESYEARFAVWTRAG 492          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: EJK48943.1 (hypothetical protein THAOC_32220 [Thalassiosira oceanica])

HSP 1 Score: 83.6 bits (205), Expect = 2.200e-12
Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 0
Query:  181 YKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGD-KEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM 341
            Y+P+  +WG F RP+NI  A+GGG  +   G  ++ D K+     ++   ++R Y++ +   ++   E +++E I+ A   A + MLRG Y      L      CS +S LG    ++LAMAYEA  +  +A  +Y  +  SP++ +++ A  L  G EAM
Sbjct:  334 YQPKVGTWGAFPRPRNISTAYGGGKRV---GADVRTDEKKRQESIESTKERLRAYRERM--GIVVQSEIDNKEIIDEALALAGRAMLRGSYSVGVSALEKVTQYCSTKSKLGGKVFLELAMAYEAEGKTDQAIGLYAALTKSPIEQIKMNADKLLYGLEAM 489          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005536320.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80034.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 79.7 bits (195), Expect = 3.200e-11
Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 0
Query:  162 SRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGL 346
            S    + +++E        YKP+ S+WG F RP ++ + FGGG  IP GGVS+  D     +   L   +  Y+ +      T    E+   ++ A   A + +  G+YE+A + L   R +  VR  LG+  L+ +A+  +AL   ++A+++Y +++ S   ++R  AK L    +A K LG+
Sbjct:   79 SENNMEPEKLERAAPPDSVYKPRVSTWGVFPRPLDVSQTFGGGRSIPIGGVSVPDDAA-QKREQRLRVLLERYRMKRNENAET---EEERSALSAALESAERMLQAGKYESALEQLTAVRPLARVRGELGSRVLLQVALCQDALGSCEDARKLYGELQHSSEPNVRDAAKQLFYSFQAAKWLGV 258          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: GAX28851.1 (hypothetical protein FisN_20Lh148 [Fistulifera solaris])

HSP 1 Score: 79.0 bits (193), Expect = 5.500e-11
Identity = 73/266 (27.44%), Postives = 132/266 (49.62%), Query Frame = 0
Query:   87 LDEDFYYDDDKNGDAAVGNLGDYSAEDK-EMYDNLKRQEKQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM--KKLGLGSKS 350
            +D   + D ++  D    +L +  A+   E  +  +R E +  V++  + ++  L    S ++ S  + G+  P L+  +    +  E  + VE YKP+  SWG FARPK+I +A+GGG  +   G     ++   A  +    ++++Y+++V   V +  E++    I++A  +    M RG Y AA   L      CS  S +G    ++LAMAYEA    +EA  +Y  +  S ++++++ A  L  G EAM   +  +GSK+
Sbjct:   65 IDPSLFDDMEEESDLPEEDLIELVAQKMLEKEEQKRRMEMETAVERSQRTEQPKL----SKTTYSTDDDGE-LPQLTTGVGGSWKKNETLE-VEYYKPKVGSWGAFARPKDISKAYGGGRRV---GPGYSNEELSEASVEATRERLQQYREKVGIDVKS--EKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKA 319          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: GAX23940.1 (hypothetical protein FisN_20Hh148 [Fistulifera solaris])

HSP 1 Score: 79.0 bits (193), Expect = 5.500e-11
Identity = 79/281 (28.11%), Postives = 133/281 (47.33%), Query Frame = 0
Query:   82 GSSNALDEDFYYDDDKNGDAAVGNLGDYSA-EDKEMYDNLKRQEKQALVDKILKAKEAGLIKPSSSS----------SSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM--KKLGLGSKS 350
            G+   + E +   DD    +    L D S  +D E   +L  ++   LV + +  KE   I+  +++           SS  + G   P L+  +    +  E  + VE YKP+  SWG FARPK+I +A+GGG  +   G     ++   A  +    ++++Y+++V   V +  E+E    I++A  +    M RG Y AA   L      CS  S +G    ++LAMAYEA    +EA  +Y  +  S ++++++ A  L  G EAM   +  +GSK+
Sbjct:   45 GALPTVAEPYQQPDDSTAPSPRKQLIDPSLFDDMEEETDLPEEDLVELVAQKMLEKEEQRIRMETAAVERPQRTEQPKSSSTDDGGELPQLTTGVGGSWKKNETLE-VEYYKPKVGSWGAFARPKDISKAYGGGRRV---GPGYSNEELSEASVEATRERLQQYREKVGIDVKS--EKEHAAEIDLALRKGAYAMQRGMYSAAVADLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKA 319          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_002297244.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86451.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 78.6 bits (192), Expect = 7.200e-11
Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  178 VETYKP-QSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM 341
            VE Y P +S +WG F RP+NI  A+GGG  I  G  + +  ++     ++   ++R Y++ +   V +  E++  + I+ A   A + M RG Y      L      CS +S +G    ++LAMAYEA  +  +A  +Y  +  SP++ +++ A+ L  G EAM
Sbjct:  250 VENYNPSKSGTWGAFPRPRNISVAYGGGKRIGAGVRTDEAKRQ--QSIEDTKEKLRAYRERMGIEVQS--EKDHADVIDEALAIAGRAMQRGSYSTGVSALEKVTQYCSTKSKVGGKVFLELAMAYEAEGKTDQAISLYAALTKSPIEQIKMNAEKLLYGLEAM 409          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005788105.1 (hypothetical protein EMIHUDRAFT_227468 [Emiliania huxleyi CCMP1516] >EOD35676.1 hypothetical protein EMIHUDRAFT_227468 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 77.4 bits (189), Expect = 1.600e-10
Identity = 78/287 (27.18%), Postives = 134/287 (46.69%), Query Frame = 0
Query:  125 KQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVG 412
            K+A+ DK+ + +E G +  +S  + S+   G                    +G   YKP+  +WG F RP +I +A+GGG  +  GG   + D+E  AK      ++    +  +G  LT LE E  + I  A+ +AR+ M  G+   A   L      C+  + LG STL++LA+A +A     EA++++ +++SS  K+ R K  A   G+EA +   L + + +  R    ++      DG   L            A T+P +ES+++A  +L  A + +  G
Sbjct:   64 KKAIEDKMRQLREQGKVASNSIMTDSMAELGAAK-----------------EGESGYKPKVGTWGVFERPADISKAYGGGKRVGLGG--YQEDEETRAKKRAETEELLRQYRRSRGMDLT-LELEHADEIAAAQEEARQLMRFGDRRGAISQLEAVTEWCTSNTPLGGSTLLELAIALDADGRRDEARKLFVKLQSSEDKNTR-KVDASGAGSEA-EYAKLATPTLMAARQFRTYS----TTDGVPRLC-----------AETRPPVESISEARMVLRTAAVRRDAG 313          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: CBJ49175.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 77.0 bits (188), Expect = 2.100e-10
Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 0
Query:  178 VETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEA 340
            V+T+KP  S+WG F RPK++ +AFGGG          + D E   + D     +    +   G  L   E+E E  I  A  Q+++ M  G+   A   L   +  CS+   LGA   ++LAMA EA     +AQ+IY  +R S  ++++ +AK LN G EA
Sbjct:  191 VDTHKPVVSTWGVFERPKDMSKAFGGG----RDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDL-KREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEA 347          
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_002179976.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48167.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 75.1 bits (183), Expect = 7.900e-10
Identity = 80/330 (24.24%), Postives = 140/330 (42.42%), Query Frame = 0
Query:   88 DEDFYYDDDKNGDAAVGNLGDYSAE----DKEMYDNLKRQEKQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPR--------NMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAV 406
            DED  Y+ D++ ++ +  + +   E    +K   D    +E +A +  +   +     +P  SS+S           L+  +    +  E     + Y+P+  SWG F RP++I +A+GGG  I   G     ++  +        +++ Y+++V   +    E+   + I  A       M RG Y  A   L      CS  S +G+   ++LAMAYEA+   +EA  +YT +    ++D++  AK L  G EAM+ +    KS+   R        +    A I    D  Y +        NY    T+  + S  +A ++L  AV
Sbjct:  244 DEDTQYEADQDEESLIDLVAEKMMEQQLREKSEKDRALMEETRARLQALELERRVETAEPPLSSTSVT--------QLTSGVGGSWDRNETAATQDVYQPKMGSWGAFPRPRDISKAYGGGRRI---GPGFSNEQARVESTAATRERLQRYREKV--GIEVESEKLHADEIAEALRIGSLAMERGIYSTAVSALEKVTRYCSSNSKVGSKVFLELAMAYEAVGRTEEAIAVYTTLSKCRMEDIKHNAKRLLYGLEAMQFMQKNVKSSEFSRKRAKNVFVDTTGLANIAEAFDDKYNMAYLDLEKGNYYKKLTEAVVRSPREARQILLKAV 560          
The following BLAST results are available for this feature:
BLAST of NO13G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14
Match NameE-valueIdentityDescription
EWM21877.12.800e-21772.36hypothetical protein Naga_100159g13 [Nannochlorops... [more]
XP_005856327.11.800e-20073.77hypothetical protein NGA_2010400, partial [Nannoch... [more]
EJK48943.12.200e-1231.68hypothetical protein THAOC_32220 [Thalassiosira oc... [more]
XP_005536320.13.200e-1128.80hypothetical protein, conserved [Cyanidioschyzon m... [more]
GAX28851.15.500e-1127.44hypothetical protein FisN_20Lh148 [Fistulifera sol... [more]
GAX23940.15.500e-1128.11hypothetical protein FisN_20Hh148 [Fistulifera sol... [more]
XP_002297244.17.200e-1131.10predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005788105.11.600e-1027.18hypothetical protein EMIHUDRAFT_227468 [Emiliania ... [more]
CBJ49175.12.100e-1033.95conserved unknown protein [Ectocarpus siliculosus][more]
XP_002179976.17.900e-1024.24predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001676NSK001676Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02200.1NO13G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672241gene_6790Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100159g13gene8550Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02200.1NO13G02200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02200 ID=NO13G02200|Name=NO13G02200|organism=Nannochloropsis oceanica|type=gene|length=1719bp
ATGGTGGGGCTGCTTCGACCTCGTCGATCCTGCGCAGGACTTGTCATCTT
CACACCACTACTCCTCCTGCTCATCGACATTGCCCTGGCCTTCATTTTCC
CCTACGCGGCACCACGACAGCGTACCCGCCCTCTACACGCTCGAGATGGT
GCCGGGGATAAGGAGCGCATTGCCAAGTTTCTGAGGCTGAAAAAGATCAA
GGAAGGAGGAGGAGATTACAATCGGTTGGTCGAAGAGGGAGCCGGCAGCA
GCAATGCGCTTGACGAGGACTTTTACTACGATGACGATAAGAATGGCGAT
GCTGCCGTGGGGAATTTAGGAGACTACTCGGCTGAGGACAAGGAAATGTA
CGACAATTTAAAGCGGCAAGAAAAGCAGGCATTGGTAGATAAGATCCTCA
AGGCCAAAGAAGCGGGGCTAATCAAGCCGTCATCCTCGTCTTCTTCAAGC
GTGCCTAACAAGGGGCAGCCGTCCCCATATCTCTCGCGCAAAATGAAGCA
GGAACAGGAAGTGGAAGAGCGATTCCAGGGCGTTGAGACGTACAAGCCAC
AAAGCTCGTCGTGGGGGGAGTTCGCGCGCCCCAAAAATATTCCTGAGGCT
TTTGGTGGTGGCGTCCATATTCCGGAAGGCGGCGTGAGCCTTAAAGGCGA
CAAGGAATGGCTAGCAAAGTACGACAACCTCATGGCCCAAGTCCGCGAGT
ACAAGAAGGAAGTGCAAGGAACGGTGTTGACCCCCTTGGAAAGGGAGGAC
GAGGAGAGAATCAATGTCGCAAGAGGACAAGCACGGAAATACATGCTGCG
CGGGGAGTACGAGGCCGCCAAAGACGTACTCTTGCCCTTTCGTACAATTT
GCTCGGTGCGCAGTGCCTTAGGGGCTTCGACGCTTATGGATTTGGCAATG
GCTTACGAGGCGCTGTACGAATTCAAGGAAGCCCAGGAGATTTACACGCA
AGTGCGGAGTTCGCCTGTGAAAGACTTGCGGGTCAAGGCCAAGGCTCTCA
ACCTAGGGGCGGAGGCGATGAAAAAGCTAGGACTTGGTTCTAAGAGTAAT
GTCAACCCCCGCAACATGATCAACTTTGCCTATATTCCCGGACAGATAGA
CGGGAGCTATGGTTTGTATATGAAGGGGAGTAGCAATTCCAACTACGACG
ATGCGCCCACCAAGCCACGGATCGAGTCAGTGGCTCAAGCCTTGGAGCTT
TTGGAAGATGCTGTCATCGCGCAAGGGGTGGGGATAAGCTTTGACACCAT
AAATGCGGCTTTGCGTGCTATCCATCAAGAGATTTTGCGGAGCGACGACT
CGGCCGGCGGACCCAAGCGGAGATTGGCGCCATTGCCTGAAGAAGAACTC
GATGGCCGATGGCGTTGTCGCGTGACATCGTATCAAGAGAACGTGCAATT
TCTGACTAAATTGAATGTGTGGCAGCGAGTGGAAACGGTGGCCGGGACTA
TCACGGGCCAGCTGGTCGTAGCACCATTCGAGGTCATAAGGGACGTAAAC
CTGAAGTACACTTTTGACCCGCTTGCGCGTGTTCTCAATTATGGCGAGCA
GGATAAGATGGCCAGTACGTTTGGTTTGCCTACGGGACTTCCGCATACTT
TGCGTGTCCTGGCGATAAGTGACACTTTGATGGTGACTGCGCGGTCCTCT
GACAAAAAGGGCTCGACGCCGCGGGCTTCCTACGACGCGCGGTTTGCCAT
ATGGACGCGAGCAGGTTGA
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protein sequence of NO13G02200.1

>NO13G02200.1-protein ID=NO13G02200.1-protein|Name=NO13G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MVGLLRPRRSCAGLVIFTPLLLLLIDIALAFIFPYAAPRQRTRPLHARDG
AGDKERIAKFLRLKKIKEGGGDYNRLVEEGAGSSNALDEDFYYDDDKNGD
AAVGNLGDYSAEDKEMYDNLKRQEKQALVDKILKAKEAGLIKPSSSSSSS
VPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEA
FGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLERED
EERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAM
AYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSN
VNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALEL
LEDAVIAQGVGISFDTINAALRAIHQEILRSDDSAGGPKRRLAPLPEEEL
DGRWRCRVTSYQENVQFLTKLNVWQRVETVAGTITGQLVVAPFEVIRDVN
LKYTFDPLARVLNYGEQDKMASTFGLPTGLPHTLRVLAISDTLMVTARSS
DKKGSTPRASYDARFAIWTRAG*
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Synonyms
Publications