NO13G02200, NO13G02200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G02200 vs. NCBI_GenBank
Match: EWM21877.1 (hypothetical protein Naga_100159g13 [Nannochloropsis gaditana]) HSP 1 Score: 764.2 bits (1972), Expect = 2.800e-217 Identity = 390/539 (72.36%), Postives = 458/539 (84.97%), Query Frame = 0 Query: 38 PRQRTRPLHARDGAGDKERIAKFLRLKKIKEGGGDYNRLVEEGAGSSNALDEDF-YYDDDKNGDAAVGNLGDYSAEDKEMYDNLKRQEKQALVDKILKA---KEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVGISFDTINAALRAIHQEILRSDDSAGGPKRRLAPLPEEELDGRWRCRVTSYQENVQFLTKLNVWQRVETVAGTITGQLVVAPFEVIRDVNLKYTFDPLARVLNYGEQDKMASTFGLPTGLPHTLRVLAISDTLMVTARSSDKKGSTPRASYDARFAIWTRAG 573 P++ PL+A G GDKER+AK LRLKKIKEGGGDYNRL++ G S ED+ Y+D+D N DAA+ + +Y+AED+EMY+ LKRQEKQAL+DKILK+ GQPSPYL+RK++Q Q+VE+RFQ VETYKPQS+SWGEFARPKNIP+AFGGGVHIPEGGV+L+GDKEWLAKYD LMAQVREYKK VQGTVLTPLE+ DEERI VAR QARKYMLRGEYEAAK VLLPFR+ICSVRS+LGASTLMDLAMA+EA+YEFKEAQ+IYTQVRSSPVKDLR KAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQI+GSYGLYMKG S+ + DD+ + RIESVAQALE+LEDAVIAQGVG+ FD INAALR +HQ++LRSD ++ GP RRLAP+P ++LDGRWRCR+T++QE+V FLTK++VWQRVE+ TITG+LVV+PFEV+RDV + +TFD RVLNYG + MAST G+PTGLPHTLRVLAI+DT++VTARSSD KG+TP+ SY+ARFA+WTRAG Sbjct: 34 PKRHLHPLYA-GGGGDKERVAKLLRLKKIKEGGGDYNRLLDGGVSGSEGGQEDYRYWDNDANDDAALPDSSEYTAEDQEMYNELKRQEKQALLDKILKSXXXXXXXXXXXXXXXXXXXXXXGQPSPYLARKLQQLQDVEKRFQNVETYKPQSTSWGEFARPKNIPDAFGGGVHIPEGGVTLEGDKEWLAKYDTLMAQVREYKKGVQGTVLTPLEKADEERIKVARTQARKYMLRGEYEAAKAVLLPFRSICSVRSSLGASTLMDLAMAHEAVYEFKEAQDIYTQVRSSPVKDLRAKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIEGSYGLYMKGKSSPSPDDSMSGLRIESVAQALEVLEDAVIAQGVGVRFDAINAALRVVHQDVLRSDFASEGPSRRLAPVPVQDLDGRWRCRLTAHQESVDFLTKVDVWQRVESETRTITGKLVVSPFEVVRDVKVAFTFDGTGRVLNYGVEGSMASTLGIPTGLPHTLRVLAITDTMLVTARSSDAKGTTPKESYEARFAVWTRAG 571
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005856327.1 (hypothetical protein NGA_2010400, partial [Nannochloropsis gaditana CCMP526] >EKU20030.1 hypothetical protein NGA_2010400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 708.4 bits (1827), Expect = 1.800e-200 Identity = 360/488 (73.77%), Postives = 422/488 (86.48%), Query Frame = 0 Query: 89 EDF-YYDDDKNGDAAVGNLGDYSAEDKEMYDNLKRQEKQALVDKILKA---KEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVGISFDTINAALRAIHQEILRSDDSAGGPKRRLAPLPEEELDGRWRCRVTSYQENVQFLTKLNVWQRVETVAGTITGQLVVAPFEVIRDVNLKYTFDPLARVLNYGEQDKMASTFGLPTGLPHTLRVLAISDTLMVTARSSDKKGSTPRASYDARFAIWTRAG 573 ED+ Y+D+D N DAA+ + +Y+AED+EMY+ LKRQEKQAL+DKILK+ GQPSPYL+RK++Q Q+VE+RFQ VETYKPQS+SWGEFARPKNIP+AFGGGVHIPEGGV+L+GDKEWLAKYD LMAQVREYKK VQGTVLTPLE+ DEERI VAR QARKYMLRGEYEAAK VLLPFR+ICSVRS+LGASTLMDLAMA+EA+YEFKEAQ+IYTQVRSSPVKDLR KAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQI+GSYGLYMKG S+ + DD+ + RIESVAQALE+LEDAVIAQGVG+ FD INAALR +HQ++LRSD ++ GP RRLAP+P ++LDGRWRCR+T++QE+V FLTK++VWQRVE+ TITG+LVV+PFEV+RDV + +TFD RVLNYG + MAST G+PTGLPHTLRVLAI+DT++VTARSSD KG+TP+ SY+ARFA+WTRAG Sbjct: 5 EDYRYWDNDANDDAALPDSSEYTAEDQEMYNELKRQEKQALLDKILKSXXXXXXXXXXXXXXXXXXXXXXGQPSPYLARKLQQLQDVEKRFQNVETYKPQSTSWGEFARPKNIPDAFGGGVHIPEGGVTLEGDKEWLAKYDTLMAQVREYKKGVQGTVLTPLEKADEERIKVARTQARKYMLRGEYEAAKAVLLPFRSICSVRSSLGASTLMDLAMAHEAVYEFKEAQDIYTQVRSSPVKDLRAKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIEGSYGLYMKGKSSPSPDDSMSGLRIESVAQALEVLEDAVIAQGVGVRFDAINAALRVVHQDVLRSDFASEGPSRRLAPVPVQDLDGRWRCRLTAHQESVDFLTKVDVWQRVESETRTITGKLVVSPFEVVRDVKVAFTFDGTGRVLNYGVEGSMASTLGIPTGLPHTLRVLAITDTMLVTARSSDAKGTTPKESYEARFAVWTRAG 492
BLAST of NO13G02200 vs. NCBI_GenBank
Match: EJK48943.1 (hypothetical protein THAOC_32220 [Thalassiosira oceanica]) HSP 1 Score: 83.6 bits (205), Expect = 2.200e-12 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 0 Query: 181 YKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGD-KEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM 341 Y+P+ +WG F RP+NI A+GGG + G ++ D K+ ++ ++R Y++ + ++ E +++E I+ A A + MLRG Y L CS +S LG ++LAMAYEA + +A +Y + SP++ +++ A L G EAM Sbjct: 334 YQPKVGTWGAFPRPRNISTAYGGGKRV---GADVRTDEKKRQESIESTKERLRAYRERM--GIVVQSEIDNKEIIDEALALAGRAMLRGSYSVGVSALEKVTQYCSTKSKLGGKVFLELAMAYEAEGKTDQAIGLYAALTKSPIEQIKMNADKLLYGLEAM 489
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005536320.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM80034.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 79.7 bits (195), Expect = 3.200e-11 Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 162 SRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGL 346 S + +++E YKP+ S+WG F RP ++ + FGGG IP GGVS+ D + L + Y+ + T E+ ++ A A + + G+YE+A + L R + VR LG+ L+ +A+ +AL ++A+++Y +++ S ++R AK L +A K LG+ Sbjct: 79 SENNMEPEKLERAAPPDSVYKPRVSTWGVFPRPLDVSQTFGGGRSIPIGGVSVPDDAA-QKREQRLRVLLERYRMKRNENAET---EEERSALSAALESAERMLQAGKYESALEQLTAVRPLARVRGELGSRVLLQVALCQDALGSCEDARKLYGELQHSSEPNVRDAAKQLFYSFQAAKWLGV 258
BLAST of NO13G02200 vs. NCBI_GenBank
Match: GAX28851.1 (hypothetical protein FisN_20Lh148 [Fistulifera solaris]) HSP 1 Score: 79.0 bits (193), Expect = 5.500e-11 Identity = 73/266 (27.44%), Postives = 132/266 (49.62%), Query Frame = 0 Query: 87 LDEDFYYDDDKNGDAAVGNLGDYSAEDK-EMYDNLKRQEKQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM--KKLGLGSKS 350 +D + D ++ D +L + A+ E + +R E + V++ + ++ L S ++ S + G+ P L+ + + E + VE YKP+ SWG FARPK+I +A+GGG + G ++ A + ++++Y+++V V + E++ I++A + M RG Y AA L CS S +G ++LAMAYEA +EA +Y + S ++++++ A L G EAM + +GSK+ Sbjct: 65 IDPSLFDDMEEESDLPEEDLIELVAQKMLEKEEQKRRMEMETAVERSQRTEQPKL----SKTTYSTDDDGE-LPQLTTGVGGSWKKNETLE-VEYYKPKVGSWGAFARPKDISKAYGGGRRV---GPGYSNEELSEASVEATRERLQQYREKVGIDVKS--EKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKA 319
BLAST of NO13G02200 vs. NCBI_GenBank
Match: GAX23940.1 (hypothetical protein FisN_20Hh148 [Fistulifera solaris]) HSP 1 Score: 79.0 bits (193), Expect = 5.500e-11 Identity = 79/281 (28.11%), Postives = 133/281 (47.33%), Query Frame = 0 Query: 82 GSSNALDEDFYYDDDKNGDAAVGNLGDYSA-EDKEMYDNLKRQEKQALVDKILKAKEAGLIKPSSSS----------SSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM--KKLGLGSKS 350 G+ + E + DD + L D S +D E +L ++ LV + + KE I+ +++ SS + G P L+ + + E + VE YKP+ SWG FARPK+I +A+GGG + G ++ A + ++++Y+++V V + E+E I++A + M RG Y AA L CS S +G ++LAMAYEA +EA +Y + S ++++++ A L G EAM + +GSK+ Sbjct: 45 GALPTVAEPYQQPDDSTAPSPRKQLIDPSLFDDMEEETDLPEEDLVELVAQKMLEKEEQRIRMETAAVERPQRTEQPKSSSTDDGGELPQLTTGVGGSWKKNETLE-VEYYKPKVGSWGAFARPKDISKAYGGGRRV---GPGYSNEELSEASVEATRERLQQYREKVGIDVKS--EKEHAAEIDLALRKGAYAMQRGMYSAAVADLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAMLFMRDNVGSKA 319
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_002297244.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86451.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 78.6 bits (192), Expect = 7.200e-11 Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 0 Query: 178 VETYKP-QSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAM 341 VE Y P +S +WG F RP+NI A+GGG I G + + ++ ++ ++R Y++ + V + E++ + I+ A A + M RG Y L CS +S +G ++LAMAYEA + +A +Y + SP++ +++ A+ L G EAM Sbjct: 250 VENYNPSKSGTWGAFPRPRNISVAYGGGKRIGAGVRTDEAKRQ--QSIEDTKEKLRAYRERMGIEVQS--EKDHADVIDEALAIAGRAMQRGSYSTGVSALEKVTQYCSTKSKVGGKVFLELAMAYEAEGKTDQAISLYAALTKSPIEQIKMNAEKLLYGLEAM 409
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_005788105.1 (hypothetical protein EMIHUDRAFT_227468 [Emiliania huxleyi CCMP1516] >EOD35676.1 hypothetical protein EMIHUDRAFT_227468 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.4 bits (189), Expect = 1.600e-10 Identity = 78/287 (27.18%), Postives = 134/287 (46.69%), Query Frame = 0 Query: 125 KQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPRNMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAVIAQGVG 412 K+A+ DK+ + +E G + +S + S+ G +G YKP+ +WG F RP +I +A+GGG + GG + D+E AK ++ + +G LT LE E + I A+ +AR+ M G+ A L C+ + LG STL++LA+A +A EA++++ +++SS K+ R K A G+EA + L + + + R ++ DG L A T+P +ES+++A +L A + + G Sbjct: 64 KKAIEDKMRQLREQGKVASNSIMTDSMAELGAAK-----------------EGESGYKPKVGTWGVFERPADISKAYGGGKRVGLGG--YQEDEETRAKKRAETEELLRQYRRSRGMDLT-LELEHADEIAAAQEEARQLMRFGDRRGAISQLEAVTEWCTSNTPLGGSTLLELAIALDADGRRDEARKLFVKLQSSEDKNTR-KVDASGAGSEA-EYAKLATPTLMAARQFRTYS----TTDGVPRLC-----------AETRPPVESISEARMVLRTAAVRRDAG 313
BLAST of NO13G02200 vs. NCBI_GenBank
Match: CBJ49175.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.0 bits (188), Expect = 2.100e-10 Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 0 Query: 178 VETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEA 340 V+T+KP S+WG F RPK++ +AFGGG + D E + D + + G L E+E E I A Q+++ M G+ A L + CS+ LGA ++LAMA EA +AQ+IY +R S ++++ +AK LN G EA Sbjct: 191 VDTHKPVVSTWGVFERPKDMSKAFGGG----RDPTLKRLDPEEKRRRDEETKAILNSYRGSTGEDL-KREKESETEIKAALAQSKRAMKFGDTFGAVSALEGVKQECSIHGPLGAVVFLELAMALEATGRSYQAQDIYKVLRRSKNREIKSQAKRLNEGLEA 347
BLAST of NO13G02200 vs. NCBI_GenBank
Match: XP_002179976.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48167.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.1 bits (183), Expect = 7.900e-10 Identity = 80/330 (24.24%), Postives = 140/330 (42.42%), Query Frame = 0 Query: 88 DEDFYYDDDKNGDAAVGNLGDYSAE----DKEMYDNLKRQEKQALVDKILKAKEAGLIKPSSSSSSSVPNKGQPSPYLSRKMKQEQEVEERFQGVETYKPQSSSWGEFARPKNIPEAFGGGVHIPEGGVSLKGDKEWLAKYDNLMAQVREYKKEVQGTVLTPLEREDEERINVARGQARKYMLRGEYEAAKDVLLPFRTICSVRSALGASTLMDLAMAYEALYEFKEAQEIYTQVRSSPVKDLRVKAKALNLGAEAMKKLGLGSKSNVNPR--------NMINFAYIPGQIDGSYGLYMKGSSNSNYDDAPTKPRIESVAQALELLEDAV 406 DED Y+ D++ ++ + + + E +K D +E +A + + + +P SS+S L+ + + E + Y+P+ SWG F RP++I +A+GGG I G ++ + +++ Y+++V + E+ + I A M RG Y A L CS S +G+ ++LAMAYEA+ +EA +YT + ++D++ AK L G EAM+ + KS+ R + A I D Y + NY T+ + S +A ++L AV Sbjct: 244 DEDTQYEADQDEESLIDLVAEKMMEQQLREKSEKDRALMEETRARLQALELERRVETAEPPLSSTSVT--------QLTSGVGGSWDRNETAATQDVYQPKMGSWGAFPRPRDISKAYGGGRRI---GPGFSNEQARVESTAATRERLQRYREKV--GIEVESEKLHADEIAEALRIGSLAMERGIYSTAVSALEKVTRYCSSNSKVGSKVFLELAMAYEAVGRTEEAIAVYTTLSKCRMEDIKHNAKRLLYGLEAMQFMQKNVKSSEFSRKRAKNVFVDTTGLANIAEAFDDKYNMAYLDLEKGNYYKKLTEAVVRSPREARQILLKAV 560 The following BLAST results are available for this feature:
BLAST of NO13G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02200 ID=NO13G02200|Name=NO13G02200|organism=Nannochloropsis oceanica|type=gene|length=1719bpback to top protein sequence of NO13G02200.1 >NO13G02200.1-protein ID=NO13G02200.1-protein|Name=NO13G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bpback to top Synonyms
Publications
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