NO13G01900, NO13G01900 (gene) Nannochloropsis oceanica

Overview
NameNO13G01900
Unique NameNO13G01900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1536
Alignment locationchr13:550329..551864 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:550329..551864 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO13G01900 vs. NCBI_GenBank
Match: CBN78754.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 133.3 bits (334), Expect = 2.200e-27
Identity = 119/405 (29.38%), Postives = 201/405 (49.63%), Query Frame = 0
Query:   17 AVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAEEVARTMA-ALAKREEEKAQEALRVKNLEVAALKIGKAVRRYTLQ 421
            A+AL P ++ R +A L + A+K+  LGS            I+PD             Q  DELSKFV DE  R + EQ  LEAR+  LI Q   L      + Y++               +Q E+ E+  AL  ++  L R LK+ P  SG  +K+ RER E   LL  + +++ +T +F AL + VE++R AQ   +++V +E+  T    +LE  L      H   V   +  +  LK  + +++ K  V +KY+R++  A+ S +  +Y Q E+ LE K   +   + +E       M +L +++ +LQ ++  W  +  ++ G+L+   +++   R    ++LE L+ R+++E  E+ AR  A ALA  EE+   E  R +N   AA +I + ++ Y L+
Sbjct:   22 ALALGPEQSHRIIAVLEEAAEKLGFLGS------------IMPDVL-----------QHRDELSKFVGDEISRIIQEQRQLEARYEKLIAQRSTLKGLANKSRYKE---------------IQAEIQEVSLALRESTKNLCRNLKDNPNISGNLLKIQRERTELIDLLTDSCRQIGETRSFQALVSVVEDSRLAQSQQSELVRREKEATQTVKKLEADLFAERADHSRQVTENKTTMVDLKQTLLKVKSKTSVDVKYSRKEHSARVSSLLRVYEQYERQLEGKVKEMERLKEVEAAVNVQTMEFLEKKRNQLQDEVDAWEERYVEEVGELERICDDLTNERNEMLIKLEGLKRRKQIETEEKQAREDAKALAVLEEQARTELERRQN--QAATQIQRVMKEYVLR 386          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: GBG27657.1 (IQ domain-containing protein G [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 120.9 bits (302), Expect = 1.100e-23
Identity = 108/365 (29.59%), Postives = 167/365 (45.75%), Query Frame = 0
Query:   13 MSSPAVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAE 378
            M+S A  L  V +QR +A L D  +K++ L            A I PD                DELS+FV DE  R + EQ  LE R+ +LI Q   L        Y+++               Q E+ E+ +AL  ++  L R LK+ P  +G  +K+  ER E   L+  T+ E+R+  TF AL   V+E R  Q+ L + + +E+ TT    +LE  LQ                IA LK E+  ++ K     +YTRR+AQAK S    +Y Q E +L     +L   +++E    +D + +L E++  L  Q +EW  +   D   LD++  ++   RE+    L  L+ R   ++AE
Sbjct:    1 MASTAEQLTLVSSQRVIAVLEDTLEKLSFL------------ASITPDVL-----------AHRDELSEFVGDEISRVIEEQRKLETRYEELISQRGMLKGLANKTKYKQN---------------QQEIQEVSRALRESTKNLCRNLKDNPNVTGNLLKIQHERNELEELIAKTVTEIREKRTFTALAMHVDETRHEQERLRETIEREKMTTNAVHELEEELQXXXXXXXXXXXXXXXXIAQLKEELQDIRSKLTFKTQYTRREAQAKLSSTARIYEQEETELRENIENLNRIKSMELSVHQDTVNFLTEKQERLIEQASEWGDRYTNDMEDLDSQLSDLTETRETALARLNELQARWDQQVAE 327          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_009839915.1 (hypothetical protein H257_13922 [Aphanomyces astaci] >ETV70532.1 hypothetical protein H257_13922 [Aphanomyces astaci])

HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19
Identity = 102/358 (28.49%), Postives = 168/358 (46.93%), Query Frame = 0
Query:   20 LAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTR--RKVEL 376
            L+P+EA RA A + +  +K++ LGS            I PD             Q  +ELS+ V DE  R + +Q  LEA++  LI Q   L      + ++++               Q E+ E+ +AL  ++  L R LK+ P F G  +K+  ER+    LLD T +EL+   T+ +L T V E + A D  A ++  E+       +L   L    I H   VA Q+AAIA LK ++ +++ K ++ ++Y R +A+AK +    LY+Q+  +   K + L  Q   E +   + +T+L  +   L  +   WT K + D      E   +   R +  ++LE L+ R   +VEL
Sbjct:   13 LSPIEATRASAIIEETIEKLSFLGS------------ITPDIL-----------QHREELSQVVGDEISRIIQDQRRLEAKYESLISQRSVLKGLANKSKFKEN---------------QREIQEVSRALRESTRSLCRNLKDNPNFGGNLLKIQYERQALVDLLDETKRELKMC-TYDSLVTYVTEGKNAADKAADLIETEKEAVEEVRRLTTELAREKIEHTRDVAEQKAAIAVLKEQLLQVKSKTQIDIRYARNEAKAKTASTSRLYQQLIAEQRDKISVLATQCDTETRVHDETVTFLRGKHERLTHEFTHWTDKYESDVAAKQKELARLTDERAANLIKLEGLQKRWVEEVEL 331          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_024584869.1 (IQ motif, EF-hand binding site [Plasmopara halstedii] >CEG48500.1 IQ motif, EF-hand binding site [Plasmopara halstedii])

HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15
Identity = 93/355 (26.20%), Postives = 172/355 (48.45%), Query Frame = 0
Query:   74 QDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAEEVARTMAALAKREEEK---AQEALRVKNLEVAAL--KIGKAVRRYTLQVRE 424
            Q  +ELS+ V D+  R + EQ  LE+++  LI Q   L      + ++K+               Q+++ E+ + L  ++  L R LKE P F+G   K+ +ER+    LL  T+ E++  GTF +L T V + +  ++   ++  +E+       +L + L    + HQ  VA  + AI  LK ++   + K +  ++Y R +A+AK S    +Y Q+ ++ + +   L  +   E +   + + +L +   +LQ ++AEW  K  QD      + +E+   R + S  LES + R + E+       +A   K+EE +     EAL+ K ++  +L  KI ++V R  +  +E
Sbjct:   36 QHREELSQVVGDDISRIIQEQRQLESKYEKLIAQRASLKGLANKSKFKKN---------------QSKIEEVSRLLRESTKSLCRNLKENPNFAGNLFKIQQEREGLLELLSHTLTEIKNRGTFESLVTFVADGKSTEEKAHEIFKKEREAVDEVKKLGVELAREKLEHQKAVADYKTAIFGLKEQILASKSKAQFDIRYARNEAKAKRSSTARMYHQLIEEQQDRIKDLQGKCDTEVKVHDESVLFLKKRHEQLQTELAEWNVKYQQDLQTKQTQLQELNDRRAANSQRLESYQKRWQQEM-------LANKLKQEERQRLLELEALKTKEIKAQSLAAKIIQSVFRAHMAKKE 368          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_009525644.1 (hypothetical protein PHYSODRAFT_299990 [Phytophthora sojae] >EGZ16586.1 hypothetical protein PHYSODRAFT_299990 [Phytophthora sojae])

HSP 1 Score: 82.0 bits (201), Expect = 5.800e-12
Identity = 100/416 (24.04%), Postives = 176/416 (42.31%), Query Frame = 0
Query:   17 AVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAEEVARTMAALAKREEEKAQ----EALRVKNLE---VAALKIGKAVRRYTLQVREQR 426
            A  L P E+ RA   L +  +K++ LGS            I PD             Q  +ELS+ V +E  R + EQ  LE ++  LI Q    +     N  +  +N             Q E+ E+ + L  ++  L R LKE P F+G  +K+ +ER+    LL  T+ E+++ GTF  L T V + +  Q+   +++ +E+       +                                   K ++ ++Y R +A+AK S    +Y Q+ ++   +   L  + + E +   + + +L +   +LQ ++AEW  K  QD     A+  E+   + + ++ LE+ + R + E        M  + ++EEE+ +    EALR + L+    AA  I  A R Y  +  E+R
Sbjct:    2 AFKLTPTESLRACGVLEESLEKMSFLGS------------ITPDIL-----------QHREELSQVVGEEISRIIQEQRQLEGKYEKLIAQ--RAVLKGLANKSKFKEN-------------QREIQEVSRLLRESTKSLCRNLKENPNFAGNLLKIQQEREGLLELLGHTLTEMKKHGTFETLLTFVADGKSTQEKAHEILKKEREAVDEVKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTQIDIRYARNEAKAKRSSTARMYHQLMEEQHDRIKDLQGKCSTETKVHDETVHFLKDRHEQLQTELAEWNAKYQQDTQAKQAQLRELQERKAANALRLENFQKRWQQE--------MTTIKQKEEERQRLLELEALRKEELKAQNTAARIIQVAYRAYMAKKEEKR 371          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_012208187.1 (hypothetical protein SPRG_13801 [Saprolegnia parasitica CBS 223.65] >KDO21092.1 hypothetical protein SPRG_13801 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 73.9 bits (180), Expect = 1.600e-9
Identity = 87/358 (24.30%), Postives = 151/358 (42.18%), Query Frame = 0
Query:   20 LAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTR--RKVEL 376
            L+PVEA RA A L +  +K++ LGS            I PD             Q  +ELS+ V DE  R + EQ  LEA++  LI Q   L      + +++                Q ++ E+ +AL  ++  L R LK+ P F G  +K+  ER+    LL  T +ELR  G + +L T V E + A +  A ++  E+                                    ++ +++ K ++ ++Y R +A+AK +    LY+Q+  + + K   +  +   E +   + + +L  +   L      W  K ++D     AE  ++   R + + +LE L+ R   +VEL
Sbjct:    7 LSPVEATRACAILEETIEKLSFLGS------------ITPDIL-----------QHREELSQVVGDEISRIIQEQRRLEAKYESLISQRSVLKGLANKSKFKE---------------TQRDIQEVSRALRESTRSLCRNLKDNPNFGGNLMKIQYERQALIDLLTETTRELRGCG-YESLVTYVTEGKHAAEKAADLIETEKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLLQVKSKTQIDIRYARSEAKAKTASTARLYQQLITEEKAKIEAVTRECDSEARVHVETVGFLKAKHESLHKDFTHWNEKYERDMAAKQAELAKLTSERNANAAKLEGLQKRWVEEVEL 325          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: ETO65388.1 (hypothetical protein F444_17286 [Phytophthora parasitica P1976])

HSP 1 Score: 72.8 bits (177), Expect = 3.500e-9
Identity = 92/400 (23.00%), Postives = 160/400 (40.00%), Query Frame = 0
Query:   17 AVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAEEVARTMAALAKREEEKAQEALRVKNLEVAALKIGKAVRR 417
            A  L P+E+ RA   L +  +K++ LGS            I PD             Q  +ELS+ V +E  R + EQ  LE ++  LI Q    +     N  +  +N             Q E+ E+ + L  ++  L R LKE P F+G  +K+ +ER+    LL  T+ E+++ GTF  L T V E +  Q+   +++ +                                             K ++ ++Y R +A+AK S    +Y Q+ ++   +   L  + A E +   + + +L +   +LQ ++AEW  K  QD     A+ +       + +  LE+ + R + E+            K++EE+ Q  L ++ L    LK      R
Sbjct:    2 AFKLTPIESLRACGVLEESLEKMSFLGS------------ITPDIL-----------QHREELSQVVGEEISRIIQEQRQLENKYEKLIAQ--RAVLKGLANKSKFKEN-------------QREIQEVSRLLRESTKSLCRNLKENPNFAGNLLKIQQEREGLLELLGHTLTEMKKHGTFDTLLTFVAEGKSTQEKAHEILKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTQIDIRYARNEAKAKRSSTARMYHQLMEEQHDRIKDLQGKCATETKVHDETVHFLKDRHEQLQTELAEWNAKYQQDIQAKQAQLQXXXXXXAANAQRLENFQKRWQEEM---------TTIKQKEEERQRLLELEALRKEELKAQNTAAR 354          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_012208183.1 (hypothetical protein SPRG_13796 [Saprolegnia parasitica CBS 223.65] >KDO21088.1 hypothetical protein SPRG_13796 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 72.8 bits (177), Expect = 3.500e-9
Identity = 87/358 (24.30%), Postives = 151/358 (42.18%), Query Frame = 0
Query:   20 LAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTR--RKVEL 376
            L+PVEA RA A L +  +K++ LGS            I PD             Q  +ELS+ V DE  R + EQ  LEA++  LI Q   L      + +++                Q ++ E+ +AL  ++  L R LK+ P F G  +K+  ER+    LL  T +ELR  G + +L T V E + A +  A ++  E+                                    ++ +++ K ++ ++Y R +A+AK +    LY+Q+  + + K   +  +   E +   + + +L  +   L      W  K ++D     AE  ++   R + + +LE L+ R   +VEL
Sbjct:    7 LSPVEATRACAILEETIEKLSFLGS------------ITPDIL-----------QHREELSQVVGDEISRIIQEQRRLEAKYESLISQRSVLKGLANKSKFKE---------------TQRDIQEVSRALRESTRSLCRNLKDNPNFGGNLMKIQYERQALIDLLTETTRELRGCG-YESLVTYVTEGKHAAEKAADLIETEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQLLQVKSKTQIDIRYARSEAKAKTASTARLYQQLITEEKAKIEAVTRECDSEARVHVETVGFLKAKHESLHKDFTHWNEKYERDMAAKQAELAKLTSERNANAAKLEGLQKRWVEEVEL 325          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_008616426.1 (hypothetical protein SDRG_12144 [Saprolegnia diclina VS20] >EQC30083.1 hypothetical protein SDRG_12144 [Saprolegnia diclina VS20])

HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9
Identity = 88/364 (24.18%), Postives = 153/364 (42.03%), Query Frame = 0
Query:   14 SSPAVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTR--RKVEL 376
            ++ A  L+PVEA RA A L +  +K++ LGS            I PD             Q  +ELS+ V DE  R + EQ  LEA++  LI Q   L      + +++                Q ++ E+ +AL  ++  L R LK+ P F G  +K+  ER+    LL  T +ELR  G + +L T V E + A +  A ++  E+                                    ++ +++ K ++ ++Y R +A+AK +    LY+Q+  + + K   +  +   E +   + + +L  +   L      W  K ++D     AE  ++   R   + +LE L+ R   +VEL
Sbjct:    3 AASAHRLSPVEATRACAILEETIEKLSFLGS------------ITPDIL-----------QHREELSQVVGDEISRIIQEQRRLEAKYESLISQRSVLKGLANKSKFKE---------------TQRDIQEVSRALRESTRSLCRNLKDNPNFGGNLMKIQYERQALIDLLTETTRELRGCG-YESLVTYVTEGKHAAEKAADLIETEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQLLQVKSKTQIDIRYARSEAKAKTASTARLYQQLITEEKAKIEAVTRECDSEARVHAETVGFLKAKHESLHKDYDHWNEKYERDMAAKQAELAKLTSERNGNAAKLEGLQKRWVEEVEL 327          
BLAST of NO13G01900 vs. NCBI_GenBank
Match: XP_008912608.1 (hypothetical protein PPTG_16848 [Phytophthora parasitica INRA-310] >ETI36661.1 hypothetical protein F443_17249 [Phytophthora parasitica P1569] >ETK76885.1 hypothetical protein L915_16782 [Phytophthora parasitica] >ETL83543.1 hypothetical protein L917_16514 [Phytophthora parasitica] >ETM36755.1 hypothetical protein L914_16617 [Phytophthora parasitica] >ETN02225.1 hypothetical protein PPTG_16848 [Phytophthora parasitica INRA-310] >ETP06491.1 hypothetical protein F441_17119 [Phytophthora parasitica CJ01A1] >ETP34581.1 hypothetical protein F442_17118 [Phytophthora parasitica P10297] >KUG01598.1 IQ domain-containing protein G [Phytophthora nicotianae])

HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9
Identity = 92/400 (23.00%), Postives = 159/400 (39.75%), Query Frame = 0
Query:   17 AVALAPVEAQRALACLHDLAQKVALLGSMPTSSSLAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEARHRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALAHNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVALKTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQAAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQAHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAENEEVAVARESYSVELESLRTRRKVELAEEVARTMAALAKREEEKAQEALRVKNLEVAALKIGKAVRR 417
            A  L P+E+ RA   L +  +K++ LGS            I PD             Q  +ELS+ V +E  R + EQ  LE ++  LI Q    +     N  +  +N             Q E+ E+ + L  ++  L R LKE P F+G  +K+ +ER+    LL  T+ E+++ GTF  L T V E +  Q+   +++                                               K ++ ++Y R +A+AK S    +Y Q+ ++   +   L  + A E +   + + +L +   +LQ ++AEW  K  QD     A+ +       + +  LE+ + R + E+            K++EE+ Q  L ++ L    LK      R
Sbjct:    2 AFKLTPIESLRACGVLEESLEKMSFLGS------------ITPDIL-----------QHREELSQVVGEEISRIIQEQRQLENKYEKLIAQ--RAVLKGLANKSKFKEN-------------QREIQEVSRLLRESTKSLCRNLKENPNFAGNLLKIQQEREGLLELLGHTLTEMKKHGTFDTLLTFVAEGKSTQEKAHEILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTQIDIRYARNEAKAKRSSTARMYHQLMEEQHDRIKDLQGKCATETKVHDETVHFLKDRHEQLQTELAEWNAKYQQDIQAKQAQLQXXXXXXAANAQRLENFQKRWQEEM---------TTIKQKEEERQRLLELEALRKEELKAQNTAAR 354          
The following BLAST results are available for this feature:
BLAST of NO13G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
CBN78754.12.200e-2729.38conserved unknown protein [Ectocarpus siliculosus][more]
GBG27657.11.100e-2329.59IQ domain-containing protein G [Aurantiochytrium s... [more]
XP_009839915.11.300e-1928.49hypothetical protein H257_13922 [Aphanomyces astac... [more]
XP_024584869.11.100e-1526.20IQ motif, EF-hand binding site [Plasmopara halsted... [more]
XP_009525644.15.800e-1224.04hypothetical protein PHYSODRAFT_299990 [Phytophtho... [more]
XP_012208187.11.600e-924.30hypothetical protein SPRG_13801 [Saprolegnia paras... [more]
ETO65388.13.500e-923.00hypothetical protein F444_17286 [Phytophthora para... [more]
XP_012208183.13.500e-924.30hypothetical protein SPRG_13796 [Saprolegnia paras... [more]
XP_008616426.16.000e-924.18hypothetical protein SDRG_12144 [Saprolegnia dicli... [more]
XP_008912608.16.000e-923.00hypothetical protein PPTG_16848 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001737NSK001737Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01900.1NO13G01900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01900.1NO13G01900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01900 ID=NO13G01900|Name=NO13G01900|organism=Nannochloropsis oceanica|type=gene|length=1536bp
ATGATTACAACAAATTTGGATGCCTCAAGCGGAGGTATGTCTTCTCCCGC
TGTGGCGTTGGCGCCTGTCGAGGCGCAAAGGGCGCTGGCCTGCCTCCACG
ATTTAGCCCAAAAAGTGGCCTTGTTGGGGTCCATGCCCACATCATCGAGC
CTGGCAGCCAAGGCTCAAATACTCCCTGACAGTTTCAATGACAATATGCA
TCCCTACGCGCGCCACCATCAGGACGAGGATGAGCTCTCCAAATTTGTGA
GGGACGAATTCCATCGGCACCTAACCGAGCAACATTGTCTCGAAGCCCGC
CACCGAGACCTCATTCGCCAATGGCACGACCTCATGGCAAATGACTATGG
AAACAATTATGAGAAAGATGACAATACGAACCCCAAGAGCCCATCTCCAC
TCCTTGACACATTGCAAACGGAAATGACCGAGATTGGCCAGGCACTTGCG
CACAACTCCGGCATCCTATTGCGGCAGCTCAAGGAACGCCCGCGCTTCAG
TGGCTTTGGTGTGAAAATGGACCGGGAACGCAAAGAATTTGCTTGCCTTC
TTGACATTACCATACAAGAATTAAGACAAACGGGCACATTTGTCGCCCTG
AAGACGGCTGTGGAGGAGGCACGACAGGCGCAGGACCTTCTTGCCCAAGT
GGTATACCAGGAGCAAAGCACGACATGGAGGGCGAGTCAGCTCGAGCTAG
CCTTGCAAGATGCCATCATCACCCACCAAGATCATGTGGCGATGCAGCAG
GCCGCTATTGCTGCTTTGAAAGTGGAGATGGATAGATTACAATACAAACA
CGAGGTCACCCTGAAATACACCCGACGGAAAGCCCAAGCGAAGGCGAGCG
GGGTGCAACACCTTTATCGCCAGGTAGAAAAAGATCTCGAACGCAAGCAG
GCCCATCTTCTAGCTCAACAGGCACTGGAGAGGCAGAGCTTTCGGGACTT
GATGACATATCTGATGGAGGAAAAACTGGAGCTTCAGGGCCAAATTGCTG
AGTGGACCACCAAGGCGGACCAGGACTTTGGGAAGCTCGACGCCGAGAAC
GAGGAGGTTGCTGTTGCGCGTGAATCGTATTCAGTAGAACTGGAATCTTT
GAGGACTCGTCGAAAGGTTGAACTGGCCGAGGAAGTGGCGCGGACAATGG
CGGCGTTGGCAAAGCGGGAGGAGGAGAAGGCGCAGGAGGCACTACGGGTA
AAGAATCTGGAAGTGGCTGCCTTGAAGATTGGCAAGGCGGTGAGGCGGTA
CACTCTGCAAGTGAGAGAGCAGCGGAATAATCCGTCAGCGAAAGCGACGG
ACAAGAAGGAGAAGAAAGGAAAGGGGAAAAGTGAGAGGGGTACGTTGCCT
AAGGCTGGAGGAGCAGAAGGCAAGAAGGCACCTGCAGTTGCGTCGAACGA
GAAGCCCGGAGCAAAGTCTGCCTCTTCCAAGCCGGCCACTAGTGCAAGAG
AAGCAGCAAGTAAAGCGCAAGTAGCTACAGTGGCGGCAACGACGGCAGCA
GGAGGAGCAGTGGCGAAGAATAATCAGGGGTTTTGA
back to top

protein sequence of NO13G01900.1

>NO13G01900.1-protein ID=NO13G01900.1-protein|Name=NO13G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bp
MITTNLDASSGGMSSPAVALAPVEAQRALACLHDLAQKVALLGSMPTSSS
LAAKAQILPDSFNDNMHPYARHHQDEDELSKFVRDEFHRHLTEQHCLEAR
HRDLIRQWHDLMANDYGNNYEKDDNTNPKSPSPLLDTLQTEMTEIGQALA
HNSGILLRQLKERPRFSGFGVKMDRERKEFACLLDITIQELRQTGTFVAL
KTAVEEARQAQDLLAQVVYQEQSTTWRASQLELALQDAIITHQDHVAMQQ
AAIAALKVEMDRLQYKHEVTLKYTRRKAQAKASGVQHLYRQVEKDLERKQ
AHLLAQQALERQSFRDLMTYLMEEKLELQGQIAEWTTKADQDFGKLDAEN
EEVAVARESYSVELESLRTRRKVELAEEVARTMAALAKREEEKAQEALRV
KNLEVAALKIGKAVRRYTLQVREQRNNPSAKATDKKEKKGKGKSERGTLP
KAGGAEGKKAPAVASNEKPGAKSASSKPATSAREAASKAQVATVAATTAA
GGAVAKNNQGF*
back to top
Synonyms
Publications