NO13G01880, NO13G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01880 vs. NCBI_GenBank
Match: XP_009833182.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV77395.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 110.2 bits (274), Expect = 1.500e-20 Identity = 80/252 (31.75%), Postives = 128/252 (50.79%), Query Frame = 0 Query: 114 VLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVVGGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGSQAELVQCVTAASVVKLTADAARELLALVNPSLKQEEQERSLDGLAQQLADALRTKLCVVTDGSKGLALA 366 +L CGS++VD ++ P + +N+ V GG +NHL W +ALG +GLLA QG D G +R+ L + V+T + E++ T++S F + G+ +++ S +L M+L F ++H A V+TEI VPL+ V L A + LD+ P VA+ A LG L +C+ A+VV+ + AARE LV+ S + +Q+ +A +L D +T+ G+ LA Sbjct: 25 LLSCGSSLVDIVSHVKHLPTAHHTTYLHRKNLAHEVVAGG-AMNHLAWCQALGLNSGLLAFQGADKYGDMIREKLHEHQVNTDFLVQKEDFETTVSRTFVAASGDSCSILSGGSMLELPQHAMKLFFAEPLQH-AKCVSTEIRHVPLASVEETLDLASHS--VRFLDLATPPSVAVHDAGLGDWETLERCLAKATVVRASVAAARE---LVDDSASRTDQD-----IAHRLRDKFGIPFVALTNDVNGVVLA 264
BLAST of NO13G01880 vs. NCBI_GenBank
Match: XP_008874878.1 (hypothetical protein H310_10312 [Aphanomyces invadans] >ETV96615.1 hypothetical protein H310_10312 [Aphanomyces invadans]) HSP 1 Score: 106.7 bits (265), Expect = 1.700e-19 Identity = 74/252 (29.37%), Postives = 127/252 (50.40%), Query Frame = 0 Query: 114 VLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVVGGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGSQAELVQCVTAASVVKLTADAARELLALVNPSLKQEEQERSLDGLAQQLADALRTKLCVVTDGSKGLALA 366 +L CGS +VD ++ P + +NV V GG +NHL W +ALG +GLLA QG D G +R+ L + V+T + NE++ T++ F + G+ +++ S +L +++ F ++H A V+TEI +PL+ V L A + LD+ + P +A+ A LG L +C+ ++VVK + DAAREL + S + +A++L + +TD ++ + +A Sbjct: 25 LLSCGSALVDVVSHVKHLPGAHHTTYLHRKNVAKEVVAGG-AMNHLAWCQALGLNSGLLAFQGADKYGDMIREKLHEHQVNTDYLVQNEDFETTVLRTFVAASGDSCSILSGGSMLELPQHAVKMFFAEPLQH-AKCVSTEIRHLPLNSVEEALDLAVHS--IRFLDLALLPSIAVHDAGLGDWKTLERCIAKSTVVKASVDAAREL---------TNDPAASPEDIARRLHEKYNVPFVALTDNAREVVMA 263
BLAST of NO13G01880 vs. NCBI_GenBank
Match: OQS06795.1 (fructokinase [Thraustotheca clavata]) HSP 1 Score: 106.3 bits (264), Expect = 2.200e-19 Identity = 68/252 (26.98%), Postives = 127/252 (50.40%), Query Frame = 0 Query: 114 VLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVVGGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGSQAELVQCVTAASVVKLTADAARELLALVNPSLKQEEQERSLDGLAQQLADALRTKLCVVTDGSKGLALA 366 ++ CGS++V+ +++ P F ++ + V GG L+H W + LG + LL+LQG D G +R+T+ + T + + + +S+ F GE+ +M+ S L M+L F ++ +A ++ +I+QVPL+ + +L A AG LD+ + P VA+ A+LG L +C++ ++VVK + AA+EL + +D +A ++ + + +TDG+ G +A Sbjct: 22 LISCGSSLVNVISHVKKLPLPNSMVFNHKKTTQNEIVTGG-ALHHSAWVQVLGVNSSLLSLQGADKYGDMIRETMRKHNISTDFMVQKDEFESSVCRTFVDSMGEKCSIMSAGSMMDLPNNAMKLFFSEPIQ-KAKSISLDINQVPLASIEEMLDVALGAGSLRFLDITLLPSVAVHEAELGDWDTLERCISKSTVVKASLAAAKEL---------TNDPSAPIDEIAIRMREKFQIPYVAITDGANGAVIA 262
BLAST of NO13G01880 vs. NCBI_GenBank
Match: XP_008874879.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV96616.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 90.1 bits (222), Expect = 1.600e-14 Identity = 62/210 (29.52%), Postives = 109/210 (51.90%), Query Frame = 0 Query: 156 LNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGSQAELVQCVTAASVVKLTADAARELLALVNPSLKQEEQERSLDGLAQQLADALRTKLCVVTDGSKGLALA 366 +NHL W +ALG +GLLA QG D G +R+ L + V+T + NE++ T++ F + G+ +++ S +L +++ F ++H A V+TEI +PL+ V L A + LD+ + P +A+ A LG L +C+ ++VVK + DAAREL + S + +A++L + +TD ++ + +A Sbjct: 1 MNHLAWCQALGLNSGLLAFQGADKYGDMIREKLHEHQVNTDYLVQNEDFETTVLRTFVAASGDSCSILSGGSMLELPQHAVKMFFAEPLQH-AKCVSTEIRHLPLNSVEEALDLAVHS--IRFLDLALLPSIAVHDAGLGDWKTLERCIAKSTVVKASVDAAREL---------TNDPAASPEDIARRLHEKYNVPFVALTDNAREVVMA 198
BLAST of NO13G01880 vs. NCBI_GenBank
Match: WP_040924413.1 (ribokinase, partial [Saccharomonospora paurometabolica]) HSP 1 Score: 70.5 bits (171), Expect = 1.300e-8 Identity = 60/186 (32.26%), Postives = 85/186 (45.70%), Query Frame = 0 Query: 114 VLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVV---GGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGS 297 VL GS VD P RR P G E V V GG N V A LG LL G D++G +R +LE GVD SA+R + T +++ +P GE +IL++P + L ++ SM ++PL V L+ A +AG+P +L ++S LG A LG+ Sbjct: 5 VLVVGSANVDLVVPARRRPGAG-------ETVLGGDTVIHPGGKGANAAVAAARLGADVALLGAVGADEHGRQLRTSLERSGVDLSAVRRVHDRPTGVAYITVTPDGENSILVSPGANEALRPADVDEALPGAQLMVVSM------EIPLETVEHALRAAARAGVPTVL--NLSSVAELGGAALGA 175
BLAST of NO13G01880 vs. NCBI_GenBank
Match: WP_019810958.1 (ribokinase, partial [Saccharomonospora halophila]) HSP 1 Score: 67.8 bits (164), Expect = 8.500e-8 Identity = 58/186 (31.18%), Postives = 84/186 (45.16%), Query Frame = 0 Query: 114 VLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVV---GGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGS 297 VL GS +D P RR P G E V V GG N V A LG LL G D++G VR +LE GVD SA+R + T +++ +P GE +IL++P + L ++ SM ++PL V L+ A +AG+ +L ++SP + A LG+ Sbjct: 5 VLVVGSANIDLVVPARRRPGAG-------ETVLGGDTVIHPGGKGANTAVAAARLGADVALLGAIGADEHGRRVRTSLERSGVDVSAVRHVRDRPTGVAYITVTPDGENSILVSPGANEALRPADVDEALPGAQLMVVSM------EIPLETVEHALRAAARAGVGTVL--NLSPVTGVSGAALGA 175
BLAST of NO13G01880 vs. NCBI_GenBank
Match: WP_055835764.1 (ribokinase [Leifsonia sp. Root4] >KQW08390.1 hypothetical protein ASC66_05715 [Leifsonia sp. Root4]) HSP 1 Score: 65.5 bits (158), Expect = 4.200e-7 Identity = 75/256 (29.30%), Postives = 115/256 (44.92%), Query Frame = 0 Query: 110 TSKLVLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVVGGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERTILMAPASTAKLEATTMELEFGSIVRHRASMVTTEISQVPLSGVLFLLQTARQAGMPAMLDVDVSPEVALGPAQLGSQAELVQCVTAASVVKLTADAARELLALVNPSLKQEEQERSLDGLAQQLADALRTKLCVVTDGSKGLALA 366 T +LV+ GS VD + +P G+ E+ A +GG N V A G T L+A GTD +G TL+ +GVDTS I+ + TT ++ + GE T+++ + L + + +I AS+V T+ ++P + V L +A AG +L +++P VA+ PA L LV A V L DAA + +L E ++ LA A + V+T GS G A Sbjct: 6 TPRLVV-VGSLNVDSTSYVGHFPAPGE----TVESTGFAVALGGKGTNQAVAAHLAGVGTELIARVGTDSSGDFALSTLDQLGVDTSGIQRIADVTTGVAQITVAASGENTVIVTAGANGLLGPELSDADAAAIA--AASLVLTQ-GEIPAATVEALAASASAAGTRYVL--NLAPPVAVAPAALAVCDPLVVNEHEARAVGLVPDAA------ADDTLSIERWQQ----LAASAVAAGHCRSLVITLGSAGAVAA 241
BLAST of NO13G01880 vs. NCBI_GenBank
Match: WP_105302362.1 (carbohydrate kinase family protein [Anaerotruncus sp. Marseille-P4302]) HSP 1 Score: 64.3 bits (155), Expect = 9.400e-7 Identity = 39/111 (35.14%), Postives = 55/111 (49.55%), Query Frame = 0 Query: 110 TSKLVLGCGSNVVDKFYPLRRWPKEGQKGFFLEENVCSARVVGGVTLNHLVWARALGTPTGLLALQGTDDNGVAVRQTLEDMGVDTSAIRVNENYTTSISHCFSSPGGERT 221 +S + G GS +D+ + L WPKE L + GG +V AR LG ++A GTD+ G +R+ LE GVDTS +++ E T+ S SP G RT Sbjct: 40 SSMKITGIGSACLDRIHQLEAWPKEDGSTHILS----TITQGGGAAATAIVTARRLGQKAAMIAAIGTDEAGAEIRRGLEQEGVDTSCLQIYEG-TSPHSEIMVSPDGSRT 145 The following BLAST results are available for this feature:
BLAST of NO13G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01880 ID=NO13G01880|Name=NO13G01880|organism=Nannochloropsis oceanica|type=gene|length=1632bpback to top protein sequence of NO13G01880.1 >NO13G01880.1-protein ID=NO13G01880.1-protein|Name=NO13G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=386bpback to top Synonyms
Publications
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