NO13G01690, NO13G01690 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G01690
Unique Name	NO13G01690
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2579
Alignment location	chr13:499826..502404 -

Link to JBrowse

Properties


Property Name	Value
Description	Cyclin-like protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:499826..502404 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR006671	Cyclin_N
IPR004367	Cyclin_C-dom
IPR013763	Cyclin-like

Homology

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_009595774.1 (PREDICTED: cyclin-A2-2-like isoform X4 [Nicotiana tomentosiformis] >XP_016463394.1 PREDICTED: cyclin-A2-2-like [Nicotiana tabacum] >XP_016463395.1 PREDICTED: cyclin-A2-2-like [Nicotiana tabacum])

HSP 1 Score: 167.2 bits (422), Expect = 1.500e-37
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0

Query:  240 QQVNLANIGAACGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQ 542
            +Q   AN+G A   + H       P   + Y+ D +  L   E ++  RP  DYL ++Q   + + MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A KFEE   P +EEF ++   +++K+++  +E RV+  LSF++++ T+  FL RFI AA +  +  +     + +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK V++LR    V  L+         T  A++ KY +P    VA +A  +  Q
Sbjct:  208 KQEGFANLGVADIDSRH-----KDPLMCSLYAPDIYNNLHAIEFDR--RPSVDYLEKLQLD-INKGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKFEEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQS-----------NHPWNPTLEHYTRYK-VSELR--TTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQ 492

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_018624925.1 (PREDICTED: cyclin-A2-2-like isoform X1 [Nicotiana tomentosiformis] >XP_018624926.1 PREDICTED: cyclin-A2-2-like isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 167.2 bits (422), Expect = 1.500e-37
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0

Query:  240 QQVNLANIGAACGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQ 542
            +Q   AN+G A   + H       P   + Y+ D +  L   E ++  RP  DYL ++Q   + + MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A KFEE   P +EEF ++   +++K+++  +E RV+  LSF++++ T+  FL RFI AA +  +  +     + +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK V++LR    V  L+         T  A++ KY +P    VA +A  +  Q
Sbjct:  237 KQEGFANLGVADIDSRH-----KDPLMCSLYAPDIYNNLHAIEFDR--RPSVDYLEKLQLD-INKGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKFEEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQS-----------NHPWNPTLEHYTRYK-VSELR--TTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQ 521

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_018624927.1 (PREDICTED: cyclin-A2-2-like isoform X3 [Nicotiana tomentosiformis])

HSP 1 Score: 167.2 bits (422), Expect = 1.500e-37
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0

Query:  240 QQVNLANIGAACGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQ 542
            +Q   AN+G A   + H       P   + Y+ D +  L   E ++  RP  DYL ++Q   + + MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A KFEE   P +EEF ++   +++K+++  +E RV+  LSF++++ T+  FL RFI AA +  +  +     + +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK V++LR    V  L+         T  A++ KY +P    VA +A  +  Q
Sbjct:  235 KQEGFANLGVADIDSRH-----KDPLMCSLYAPDIYNNLHAIEFDR--RPSVDYLEKLQLD-INKGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKFEEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQS-----------NHPWNPTLEHYTRYK-VSELR--TTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQ 519

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: KFK24211.1 (hypothetical protein AALP_AAs42301U000600 [Arabis alpina])

HSP 1 Score: 166.8 bits (421), Expect = 1.900e-37
Identity = 102/281 (36.30%), Postives = 161/281 (57.30%), Query Frame = 0

Query:  261 DSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAA-----GSRPRETALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIAC 537
            ++ PQ  A ++ D + +LR  E ++  RP  D++ R+Q   +   MR +L+DWLV V EE  L+P TLY  V  +DR LS  ++++++LQ LG AC+ +A K+EE   P +EEF Y+   ++ K ++ D+E  V+  L F ++  T+  FL RF+ AA         +   + +Y++ELSLL Y  L++ PS+ AA+A++LA+  L     DP RR       W  T+ HYT YK    L L+ CV+ L+R  + A  ST  A++ KY++     VA+  C
Sbjct:  169 NADPQLCATFACDIYQHLRASEAKK--RPAVDFMERVQKD-VNSSMRGILVDWLVEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESTVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLLEYTMLSYSPSLVAASAIFLAKYIL-----DPTRRP------WNSTLQHYTQYKA---LELRGCVKDLQRLCSNAHASTLPAVREKYSQHKYKFVAKKFC 432

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_009758609.1 (PREDICTED: cyclin-A2-2-like isoform X1 [Nicotiana sylvestris] >XP_016490247.1 PREDICTED: cyclin-A2-2-like isoform X1 [Nicotiana tabacum])

HSP 1 Score: 166.8 bits (421), Expect = 1.900e-37
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0

Query:  240 QQVNLANIGAACGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQ 542
            +Q   AN+G A   + H       P   + Y+ D +  L   E ++  RP  DYL ++Q   + + MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A KFEE   P +EEF ++   +++K+++  +E RV+  LSF++++ T+  FL RFI AA +  +  +     + +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK V++LR    V  L+         T  A++ KY +P    VA +A  +  Q
Sbjct:  246 KQEGFANLGIADIDSRH-----KDPLMCSLYAPDIYNNLHAIEFDR--RPSVDYLEKLQLD-INKGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKFEEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQS-----------NHPWNPTLEHYTRYK-VSELR--TTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQ 530

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_009758618.1 (PREDICTED: cyclin-A2-2-like isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 166.8 bits (421), Expect = 1.900e-37
Identity = 111/307 (36.16%), Postives = 170/307 (55.37%), Query Frame = 0

Query:  240 QQVNLANIGAACGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQ 542
            +Q   AN+G A   + H       P   + Y+ D +  L   E ++  RP  DYL ++Q   + + MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A KFEE   P +EEF ++   +++K+++  +E RV+  LSF++++ T+  FL RFI AA +  +  +     + +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK V++LR    V  L+         T  A++ KY +P    VA +A  +  Q
Sbjct:  206 KQEGFANLGIADIDSRH-----KDPLMCSLYAPDIYNNLHAIEFDR--RPSVDYLEKLQLD-INKGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKFEEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQS-----------NHPWNPTLEHYTRYK-VSELR--TTVFALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQ 490

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_024586419.1 (cyclin-like protein [Plasmopara halstedii] >CEG50050.1 cyclin-like protein [Plasmopara halstedii])

HSP 1 Score: 166.4 bits (420), Expect = 2.500e-37
Identity = 101/253 (39.92%), Postives = 146/253 (57.71%), Query Frame = 0

Query:  257 PAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHA 510
            P+AT S+    A   R+  TY R+ E +    P ADY+  +Q   + + MR +LIDWLV VCEE EL   T +  V LVDR L K+ + ++Q Q LGCAC+ +A KFEE   P +EEF Y++ +++T  ++ ++E++V+ AL +RV++ T Y F+ R+  A  +  ++ +LV YL + +LL    + F PSI  A+A+YLAR T   S P            WTPT+ H T Y P   L  Q CV  L R HA
Sbjct:  237 PSATISSHH--AKLIRELDTYYRKHEIKY--LPEADYIGTVQMD-INEKMRTILIDWLVEVCEEYELDSQTFHKAVNLVDRCLKKIKINRKQFQLLGCACMMIAAKFEEVFGPNVEEFVYISDQTYTAVEMLNMEVQVLNALQYRVASTTCYGFIHRYTEAGCTTDKQRSLVLYLCDFALLFLHMVRFKPSILVASAVYLARLTTGVSDP------------WTPTLHHATKYNP---LDFQECVEELHRLHA 469

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_011081887.1 (cyclin-A2-2-like isoform X1 [Sesamum indicum] >XP_020550236.1 cyclin-A2-2-like isoform X1 [Sesamum indicum])

HSP 1 Score: 166.0 bits (419), Expect = 3.300e-37
Identity = 103/277 (37.18%), Postives = 158/277 (57.04%), Query Frame = 0

Query:  264 PQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIA 536
            PQ  + Y+ D ++ L  R+ ++  RP A+Y+ ++Q   +TQ MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A K+EE   P +EEF ++   ++TK+++  +E RV+  L F++S  T+  FL RFI AA    +  +     L +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK      L+  VR L+            A++ KY +P    V+ ++
Sbjct:  227 PQMCSLYAADIYSNLYSRQVDR--RPFANYMEKLQRD-ITQGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVVKMESRVLNFLGFQLSVPTTKKFLRRFIQAAQVSYKVPSVELEFLANYLAELTLIDYSFLKFLPSLIAASAVFLARWTLDQS-----------EHPWNPTLEHYTRYK---TSELKTAVRELQDLQLNTSGCMLNAVREKYRQPKFKCVSTLS 486

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_011081889.1 (cyclin-A2-1-like isoform X2 [Sesamum indicum])

HSP 1 Score: 166.0 bits (419), Expect = 3.300e-37
Identity = 103/277 (37.18%), Postives = 158/277 (57.04%), Query Frame = 0

Query:  264 PQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIA 536
            PQ  + Y+ D ++ L  R+ ++  RP A+Y+ ++Q   +TQ MR +LIDWLV V EE  L+P TLY  V L+DR LS+  + K++LQ LG  C+ +A K+EE   P +EEF ++   ++TK+++  +E RV+  L F++S  T+  FL RFI AA    +  +     L +YL+EL+L+ Y FL F PS+ AA+A++LAR TL  S            + W PT+ HYT YK      L+  VR L+            A++ KY +P    V+ ++
Sbjct:  223 PQMCSLYAADIYSNLYSRQVDR--RPFANYMEKLQRD-ITQGMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVVKMESRVLNFLGFQLSVPTTKKFLRRFIQAAQVSYKVPSVELEFLANYLAELTLIDYSFLKFLPSLIAASAVFLARWTLDQS-----------EHPWNPTLEHYTRYK---TSELKTAVRELQDLQLNTSGCMLNAVREKYRQPKFKCVSTLS 482

[Close]

BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_022571218.1 (cyclin-A1-1-like [Brassica napus])

HSP 1 Score: 166.0 bits (419), Expect = 3.300e-37
Identity = 105/281 (37.37%), Postives = 157/281 (55.87%), Query Frame = 0

Query:  261 DSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAA-----GSRPRETALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIAC 537
            D+ PQ  A ++ D + +LR  E ++Q  P  DY+  +Q   +   MR +L+DWLV V EE  L+P TLY  V  +DR LS  ++++++LQ LG AC+ +A K+EE   P +EEF Y+   ++ K ++ D+E  V+  L F +S  T   FL RF  AA         +   +  Y++ELSLL Y  L+ PPS+ AA+A++LA+ TL     DP RR       W  T+ HYT Y+    L L+ CV  L+R  + A  ST  A++ KY++     VA+  C
Sbjct:  154 DADPQLCATFACDIYNHLRAAEAKKQ--PAVDYMETVQKD-VNSTMRGILVDWLVEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEVCAPQVEEFCYITDNTYLKDEVLDMESAVLNYLKFEMSAPTVKCFLRRFSRAAQGVHEAPCMQLECMASYIAELSLLEYTMLSHPPSLVAASAIFLAKYTL-----DPTRRP------WNSTLQHYTQYEA---LELRGCVMDLQRLCSNAHVSTLPAVRDKYSQHKYKFVAKKFC 417

The following BLAST results are available for this feature:

BLAST of NO13G01690 vs. NCBI_GenBank

BLAST of NO13G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_009595774.1	1.500e-37	36.16	PREDICTED: cyclin-A2-2-like isoform X4 [Nicotiana ...	[more]
XP_018624925.1	1.500e-37	36.16	PREDICTED: cyclin-A2-2-like isoform X1 [Nicotiana ...	[more]
XP_018624927.1	1.500e-37	36.16	PREDICTED: cyclin-A2-2-like isoform X3 [Nicotiana ...	[more]
KFK24211.1	1.900e-37	36.30	hypothetical protein AALP_AAs42301U000600 [Arabis ...	[more]
XP_009758609.1	1.900e-37	36.16	PREDICTED: cyclin-A2-2-like isoform X1 [Nicotiana ...	[more]
XP_009758618.1	1.900e-37	36.16	PREDICTED: cyclin-A2-2-like isoform X2 [Nicotiana ...	[more]
XP_024586419.1	2.500e-37	39.92	cyclin-like protein [Plasmopara halstedii] >CEG500...	[more]
XP_011081887.1	3.300e-37	37.18	cyclin-A2-2-like isoform X1 [Sesamum indicum] >XP_...	[more]
XP_011081889.1	3.300e-37	37.18	cyclin-A2-1-like isoform X2 [Sesamum indicum]	[more]
XP_022571218.1	3.300e-37	37.37	cyclin-A1-1-like [Brassica napus]	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL134	nonsL134	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL131	nonsL131	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR026	ncniR026	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR070	ngnoR070	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR069	ngnoR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001714	NSK001714	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO13G01690.1	NO13G01690.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|596504	gene_6837	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100051g13	gene8589	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO13G01690.1	NO13G01690.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO13G01690 ID=NO13G01690|Name=NO13G01690|organism=Nannochloropsis oceanica|type=gene|length=2579bp
TCCACTCCTTCTTCTTCTGCCTAGGAAAAGCGAGGGAAGTGTTGATCCTT
GTATTTTCTTTGTTGTGTGTGCGTTGTGGTGGATAAGGCATATTGGCACA
ATTTCCCAATCGATGCCAACCAACAACGCCGCTCGCTCACCCTCGTCAAC
CTCGACACGCCCTCGACGTCCCCCCAGATCGTCTGATCTGAGGCCTACCC
TCCCGCCTTATCCTCTTCGCTCCTTTCAGTGCAATATACAGCACACAAAA
TAGACTCTCGCACACCTCTCAACTTTATACTTCACACGCCTCCACTGACA
GGTCCGCCGCCGCCGCCGCAGCCCGGCCTCCTTCTGCAGCTCTTCGCCCA
GCCCCCTTCCCGCCAGCACCTCGTCCAGCCCGCCACCCTACCCTCACAGA
AGCAGAAATGGTTTATCAAAAGCGCAAAATTCTTGGCGATATTACGGTTG
CCGCCCTCTTGGGCACACACCCATACCGCAGCACCGGCGATGCCGATGGC
GACGCAAGCGGGAAACGCCAGgtccgtcctttatatgtgtcgtggctttt
ccctccagcccaacctcctgaccttcgctcttccctttctctcgtacaca
actcacccggctacagCGCCTCCGCTCGAGCACTTCCAAGTCCAACTATA
CTGCCCAGATTCAAGACGCCCCCCGCCGCATGACCCGGCGTTCCTCCGCG
TTAGCCGCCACCTGCCCATCCACCTCTGCTGCCGATGCTTTTCAAAAAGG
ACCCTCCCATGCCGACAAGGACGACAGCACCGCCTCCCGACGCCTCTACT
CCACTCAAGCCTTATCCTGTCCCCGCAGCATCAACACTAGTATCAACGAC
GCTGGCAATCTCCTGGCTTGCCATGAGGCCTTGGCTCTAAAAGAGCCCGC
CATGCATATCACGCCTGCTGCTCTGTCTGCTTTCTCCCGCAGATCTGTTG
CCTCCCCCACCGAGGCCGCCAACCGCCACCTCAACACTCACTTGAAGTCT
TCTTCTTCCTCCTCTCCCTCCCCTTCCTCTTCTTCCTTGTCCTCCTCTCC
TAACCTACCCCCCGGCATCGTCGACATTGACGACATTCAAAGCCAGCAAC
CCCGCAGCAACCACTACAGTAGTAGCAGCAGCAGCAGCAGTAGCAGCAGC
AGCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAA
CTGCTCGTTCGACACGCATCAGCAAGTCAATCTTGCGAACATTGGCGCCG
CCTGTGGCCCCAACCACCATCCGGCAGCAACTGACAGCACGCCCCAACGG
TTGGCAGCCTACAGCCGCGATTACTTCACCTACCTCAGAGAACGAGAACG
CGAGCAGCAAGACAGGCCCATGGCTGACTATTTGGCTCGGATGCAAGGTG
GGGCTTTGACTCAAGATATGCGCGCGTTGCTCATTGATTGGTTAGTCACA
GTGTGTGAGGAATGCGAGCTGATGCCTTCAACCCTATACCATTGCGTGGA
ACTCGTCGATCGTGCCCTCAGCAAAGTAATCGTAGCCAAAGAACAGCTGC
AGTGCCTGGGGTGTGCCTGTCTATTCGTCGCCTGCAAATTCGAAGAAACT
ACTGTCCCGCCCCTGGAAGAATTCACATATATGGCCGCTGAATCCTTCAC
TAAAAAACAACTCACCGACCTCGAGCTCCGTGTAGTTGAAGCCCTCTCCT
TCCGCGTCTCCACTGTAACGAGCTACAATTTTCTCCCCCGCTTCATCCTT
GCGGCTGGATCCCGTCCAAGAGAAACAGCCCTGGTGCACTACCTCTCTGA
ATTGTCCCTCCTCCACTACGAATTCCTCGCCTTTCCTCCCTCCATCCGCG
CTGCTGCTGCTCTTTACCTGGCTCGACAGACGTTGGCGGCATCTACTCCT
GACCCCATCCGCCGGACGGCCGAGGAAAGGAATGTCTGGACTCCTACTAT
TGCTCATTACACAGGGTATAAACCTGTGACTGACTTGCGGTTGCAGGCGT
GTGTGAGGTTGTTGAGGAGAGCGCATGCGGGGGCGGAGTGGTCTACTTAC
GAGGCGTTGAAAGTCAAGTATACCGAACCGGCGCTATTGCACGTGGCGGA
GATTGCGTGTTTGGAGGACGAACAATTGGGTTTTCCTTCCTCTTCGAATT
AGACACCATGGAGGGAATTAGAGGAAGAAGAAAGAGTAGATGGAGGAGAT
ATGTAACGACAGCTCGATTAGAAGAGCAATGACCAAAGTAAAGGTAGCTT
TCAGACGAAGAAAAGGAGAGGCGCATATGCCATGTTTGCCCTATTTTGTG
CGTGTGATGATTAGATGAACTGAATGTGAATGAGATATAATTTGAAGTCT
TCCAAAAAGAAGGGTACTGAAATGTGTGCAAGCTGACCCAACATAGGCAC
TTCTTCCTCTTCTTCCTCCTCCCCCGTCCAGCGACTGTCATCTTGCTTGC
CTTGGCCGTCTACAAGGAGGCCGACCAAAGCAAACGCATGTTGCTGGGTT
TTGAGTGAGTATGAACAGTGGGAAAATACCAGAAGGTGCCCATCCCCATA
AAAGCAAACTAGACATAGCGATATCCTCA

protein sequence of NO13G01690.1

>NO13G01690.1-protein ID=NO13G01690.1-protein|Name=NO13G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MVYQKRKILGDITVAALLGTHPYRSTGDADGDASGKRQRLRSSTSKSNYT
AQIQDAPRRMTRRSSALAATCPSTSAADAFQKGPSHADKDDSTASRRLYS
TQALSCPRSINTSINDAGNLLACHEALALKEPAMHITPAALSAFSRRSVA
SPTEAANRHLNTHLKSSSSSSPSPSSSSLSSSPNLPPGIVDIDDIQSQQP
RSNHYSSSSSSSSSSSSSNNNNNNNNNNNNNSNCSFDTHQQVNLANIGAA
CGPNHHPAATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGG
ALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQ
CLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSF
RVSTVTSYNFLPRFILAAGSRPRETALVHYLSELSLLHYEFLAFPPSIRA
AAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQAC
VRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQLGFPSSSN*

Synonyms

Publications