NO13G01690, NO13G01690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01690 vs. NCBI_GenBank
Match: EWM21830.1 (cyclin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 471.9 bits (1213), Expect = 2.800e-129 Identity = 234/286 (81.82%), Postives = 255/286 (89.16%), Query Frame = 0 Query: 258 AATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQLG 544 A TD TPQRLA+YSRDYF YLREREREQQDRP+ DY++R+QGGALTQDMRALL+DWLVTVCEECELMPSTLYHCVEL+DRALSK+ V KEQLQC+GCACLF+ACKFEETTVP LEEFTYMAAESF+KKQLTDLELRVVEALSFR+STVT+YNFL RF LAAGS PRETALV+Y SELSLLHYEFL F PSIRAAAALYLARQTLA S D RR AEERN+WTPTIA YTGY P T L LQ CVRLLRRAHAG E+S YEALK+KY PALLHV +IAC+E++ LG Sbjct: 102 ALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIACVEEKDLG 387
BLAST of NO13G01690 vs. NCBI_GenBank
Match: CBJ31007.1 (Putative cyclin A [Ectocarpus siliculosus]) HSP 1 Score: 186.8 bits (473), Expect = 1.800e-43 Identity = 111/275 (40.36%), Postives = 164/275 (59.64%), Query Frame = 0 Query: 270 YSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIACLEDEQLGF 545 Y++++ YLRE+E+ ++RP+A Y+ Q + MR++L+DW+ VC++ +L TL+ V+L+DR+LS V + +LQ LGCAC+ +A K+EE P EE +++ ++T+ ++ +EL VV AL FR++ +T NF RF LAA S RE +LV YL EL L Y+ ++ PS++AAAALYLARQTL R WT HYTGY L+ CVR L H AE + A++ KY + AL VAE+ C ++ L F Sbjct: 74 YAKEHALYLREQEK--RNRPVA-YIGAKQKD-MRPSMRSVLVDWICEVCDQFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTCITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTL--------HPRGCPREAWTRQTEHYTGY---AARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHF 333
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_018447783.1 (PREDICTED: cyclin-A1-1-like isoform X1 [Raphanus sativus]) HSP 1 Score: 172.9 bits (437), Expect = 2.700e-39 Identity = 107/286 (37.41%), Postives = 164/286 (57.34%), Query Frame = 0 Query: 261 DSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALVH------YLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRR----TAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIAC 537 D+ PQ +A ++ D + +LR E ++ RP D++ R+Q + MR +L+DWLV V EE L+P TLY V +DR LS ++++++LQ LG AC+ +A K+EE P +EEF Y+ ++ K ++ D+E V+ L F +S T+ FL RF+ AA E L+H Y++ELSLL Y L+ PPS+ AA+A++LA+ L DP RR T W T+ HYT Y+ + L+ CV+ L+R + A ST A++ KY++ VA+ C Sbjct: 152 DADPQLVATFACDIYKHLRAAETKK--RPATDFMERVQKD-VNSTMRGILVDWLVEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESAVLNYLKFEMSAPTTKCFLRRFVRAA-HEVHEAPLMHLECMASYIAELSLLEYTMLSHPPSLLAASAIFLAKYIL-----DPTRRPWVCTCTLFRPWNSTLQHYTQYRA---MELRGCVKDLQRLSSNAHVSTLPAVREKYSQHKYKFVAKKFC 425
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_018447784.1 (PREDICTED: cyclin-A1-1-like isoform X2 [Raphanus sativus]) HSP 1 Score: 172.9 bits (437), Expect = 2.700e-39 Identity = 106/282 (37.59%), Postives = 163/282 (57.80%), Query Frame = 0 Query: 261 DSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALVH------YLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIAC 537 D+ PQ +A ++ D + +LR E ++ RP D++ R+Q + MR +L+DWLV V EE L+P TLY V +DR LS ++++++LQ LG AC+ +A K+EE P +EEF Y+ ++ K ++ D+E V+ L F +S T+ FL RF+ AA E L+H Y++ELSLL Y L+ PPS+ AA+A++LA+ L DP RR W T+ HYT Y+ + L+ CV+ L+R + A ST A++ KY++ VA+ C Sbjct: 152 DADPQLVATFACDIYKHLRAAETKK--RPATDFMERVQKD-VNSTMRGILVDWLVEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESAVLNYLKFEMSAPTTKCFLRRFVRAA-HEVHEAPLMHLECMASYIAELSLLEYTMLSHPPSLLAASAIFLAKYIL-----DPTRRP------WNSTLQHYTQYRA---MELRGCVKDLQRLSSNAHVSTLPAVREKYSQHKYKFVAKKFC 415
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_024403396.1 (cyclin-A1-4-like [Physcomitrella patens] >PNR59607.1 hypothetical protein PHYPA_002399 [Physcomitrella patens]) HSP 1 Score: 168.3 bits (425), Expect = 6.600e-38 Identity = 102/267 (38.20%), Postives = 151/267 (56.55%), Query Frame = 0 Query: 262 STPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALV-----HYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKY 524 S PQ Y+ D + +LR E ++ RP A+++ MQ + MR +L+DWLV V EE +L+P TLY V +DR LS +V +++LQ LG AC+ +A K+EE P +EEF Y+ ++ ++++ ++E V+ L F ++T T +FL RFI AA + ALV +YL+EL+L+ Y FL F PS+ AA+ YLAR TL +S R W T+ HYTGY+P L+ CVR + T A++ KY Sbjct: 194 SDPQMCTTYATDIYAHLRMAEMKR--RPSANFMESMQQD-INPSMRGILVDWLVEVAEEYKLVPDTLYLTVSCIDRYLSAHVVTRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYGREEVLEMERGVLRVLKFELTTPTIKSFLRRFIRAAQAGCEAPALVLEFLGNYLAELTLVEYGFLPFLPSMIAASCAYLARVTLDSS-----------RRPWDATLQHYTGYRP---SELEQCVRAMHELQCNTRGCTLPAVREKY 443
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_024401460.1 (cyclin-A1-4-like [Physcomitrella patens] >PNR59604.1 hypothetical protein PHYPA_002396 [Physcomitrella patens]) HSP 1 Score: 168.3 bits (425), Expect = 6.600e-38 Identity = 102/267 (38.20%), Postives = 151/267 (56.55%), Query Frame = 0 Query: 262 STPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALV-----HYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKY 524 S PQ Y+ D + +LR E ++ RP A+++ MQ + MR +L+DWLV V EE +L+P TLY V +DR LS +V +++LQ LG AC+ +A K+EE P +EEF Y+ ++ ++++ ++E V+ L F ++T T +FL RFI AA + ALV +YL+EL+L+ Y FL F PS+ AA+ YLAR TL +S R W T+ HYTGY+P L+ CVR + T A++ KY Sbjct: 194 SDPQMCTTYATDIYAHLRMAEMKR--RPSANFMESMQQD-INPSMRGILVDWLVEVAEEYKLVPDTLYLTVSCIDRYLSAHVVTRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYGREEVLEMERGVLRVLKFELTTPTIKSFLRRFIRAAQAGCEAPALVLEFLGNYLAELTLVEYGFLPFLPSMIAASCAYLARVTLDSS-----------RRPWDATLQHYTGYRP---SELEQCVRAMHELQCNTRGCTLPAVREKY 443
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_024398573.1 (cyclin-A1-4-like [Physcomitrella patens] >PNR59617.1 hypothetical protein PHYPA_002409 [Physcomitrella patens]) HSP 1 Score: 168.3 bits (425), Expect = 6.600e-38 Identity = 103/279 (36.92%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 262 STPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETALV-----HYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIA 536 S PQ + Y+ D ++YLR E ++ RP +++ MQ + MR +L+DWLV V EE +L+P TLY V +DR LS +V +++LQ LG AC+ +A K+EE P +EEF Y+ ++ ++++ ++E V+ L F ++T T+ +FL RFI AA + + LV +YL+EL+LL Y FL F PS+ AA+A+YLA+ TL +ST W T+ HYTGY+P L CV+ + + + A++ KY + VA +A Sbjct: 193 SDPQMCSTYATDIYSYLRMAEIKR--RPSGNFMESMQQD-INPTMRGILVDWLVEVAEEYKLVPDTLYLTVSYIDRYLSLHVVTRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYCREEVLEMERAVLNVLKFELTTPTTKSFLRRFIRAAQASYKTPTLVLEFLGNYLAELTLLEYGFLPFLPSMIAASAVYLAKITLDSSTCP-----------WDATLQHYTGYRP---SELGHCVKAIHELQRNTDSCSLPAVREKYRQHKFKCVATLA 454
BLAST of NO13G01690 vs. NCBI_GenBank
Match: OTG20292.1 (putative CYCLIN A2,3 [Helianthus annuus]) HSP 1 Score: 167.5 bits (423), Expect = 1.100e-37 Identity = 103/276 (37.32%), Postives = 161/276 (58.33%), Query Frame = 0 Query: 264 PQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEI 535 PQ + Y+ + + L R E + +P+ +Y+ +Q +TQ+MR +LIDWLV VCEE +L TLY V L+D+ LSK+ + K++LQ LG C+ +A K+EE P +E+F ++ ++T++++ D+E +VV+ LSF++S T FL RFILAA S + L +YL+EL+L Y FL FPPS+ AA+A++LA+ TL + + W PT+ HYT YK +L+ V L+ E +T A++ KY + VA + Sbjct: 216 PQMCSLYAAEIYNNL--RAAELKGKPLVNYMKTVQRD-ITQEMRGILIDWLVEVCEEYKLKSETLYLTVTLIDQYLSKMYIEKQRLQLLGITCMLIASKYEEIIAPRVEDFCFITDGTYTRREVLDMEHQVVDMLSFQISVPTVIKFLRRFILAAQSSYKVPIVELEYLANYLAELTLTEYSFLKFPPSLIAASAVFLAKWTL-----------DQVEHPWNPTLEHYTNYKA---SKLKETVLALQDIQLNKE-ATLHAIRQKYMQYKFNKVATL 473
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_021972793.1 (cyclin-A2-1-like [Helianthus annuus] >XP_021972794.1 cyclin-A2-1-like [Helianthus annuus]) HSP 1 Score: 167.5 bits (423), Expect = 1.100e-37 Identity = 103/276 (37.32%), Postives = 161/276 (58.33%), Query Frame = 0 Query: 264 PQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFILAAGSRPRETA-----LVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEI 535 PQ + Y+ + + L R E + +P+ +Y+ +Q +TQ+MR +LIDWLV VCEE +L TLY V L+D+ LSK+ + K++LQ LG C+ +A K+EE P +E+F ++ ++T++++ D+E +VV+ LSF++S T FL RFILAA S + L +YL+EL+L Y FL FPPS+ AA+A++LA+ TL + + W PT+ HYT YK +L+ V L+ E +T A++ KY + VA + Sbjct: 208 PQMCSLYAAEIYNNL--RAAELKGKPLVNYMKTVQRD-ITQEMRGILIDWLVEVCEEYKLKSETLYLTVTLIDQYLSKMYIEKQRLQLLGITCMLIASKYEEIIAPRVEDFCFITDGTYTRREVLDMEHQVVDMLSFQISVPTVIKFLRRFILAAQSSYKVPIVELEYLANYLAELTLTEYSFLKFPPSLIAASAVFLAKWTL-----------DQVEHPWNPTLEHYTNYKA---SKLKETVLALQDIQLNKE-ATLHAIRQKYMQYKFNKVATL 465
BLAST of NO13G01690 vs. NCBI_GenBank
Match: XP_024166889.1 (putative cyclin-A3-1 [Rosa chinensis] >PRQ27785.1 putative cyclin A2 [Rosa chinensis]) HSP 1 Score: 167.5 bits (423), Expect = 1.100e-37 Identity = 100/285 (35.09%), Postives = 162/285 (56.84%), Query Frame = 0 Query: 258 AATDSTPQRLAAYSRDYFTYLREREREQQDRPMADYLARMQGGALTQDMRALLIDWLVTVCEECELMPSTLYHCVELVDRALSKVIVAKEQLQCLGCACLFVACKFEETTVPPLEEFTYMAAESFTKKQLTDLELRVVEALSFRVSTVTSYNFLPRFI-LAAGSRPRE-----TALVHYLSELSLLHYEFLAFPPSIRAAAALYLARQTLAASTPDPIRRTAEERNVWTPTIAHYTGYKPVTDLRLQACVRLLRRAHAGAEWSTYEALKVKYTEPALLHVAEIAC 537 A D PQ AY+ D + YLR E E + RP++DY+ ++Q ++ +MR +L+DWLV V +E EL+P TL+ V VD+ LS +V + +LQ +G A +F+A K+EE P ++E + + +FTK+Q+ +E ++ +L F + FL +FI LA S + +L++YL++LSL+ Y+ + F PSI AA+A++LAR + T + N W P + YTGYK V L+ CV ++ + G + A++ KY + L VA++ C Sbjct: 82 ARDDEDPQLCGAYAADIYAYLRRMEVEPKRRPLSDYMEKIQKDSINANMRGVLVDWLVEVADEYELLPETLHLAVSYVDKYLSMNVVLRSELQLVGVASIFIASKYEEIDPPNVDELSDITENTFTKQQVIKMEADILLSLKFEMGNPNVRTFLRKFIDLAQESYYKNPNLQFESLIYYLTDLSLVDYKLVKFLPSIIAASAVFLARVII----------TRSKMNPWCPALQEYTGYKAVD---LRECVLIIHDLYLGRRGGSLVAVRDKYKQIKLKCVAKMHC 353 The following BLAST results are available for this feature:
BLAST of NO13G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01690 ID=NO13G01690|Name=NO13G01690|organism=Nannochloropsis oceanica|type=gene|length=2579bpback to top protein sequence of NO13G01690.1 >NO13G01690.1-protein ID=NO13G01690.1-protein|Name=NO13G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=550bpback to top Synonyms
Publications
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