NO13G01480, NO13G01480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01480 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 220.3 bits (560), Expect = 9.900e-54 Identity = 116/263 (44.11%), Postives = 160/263 (60.84%), Query Frame = 0 Query: 42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVC--EPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYAR-DPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 P LEP Y EFEK ++ +R ++ +P+ A ILY + G+ + R+ P NL R AFWN L+ FS +G R +P LL H + R +C A YG G++G+W +LF +SK EL+DT +V+ K +FLHWYHH+TVLLY W SY +P GI+F MNYSVHA MY YYFL +K+ PKWFNP+ IT+ QISQM+ GV +T+A F Y + DP+CG+ + MY +YL+ F+ FF R++ Sbjct: 27 PQLEPFYFEFEKNYDPIPLLEWMRYHSMIPVYAVILYGVLITVGQYAMRNRE-----PFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPTCGIQNENNTAAFVMYGSYLFLFLQFFFGRYF 284
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 211.8 bits (538), Expect = 3.500e-51 Identity = 110/264 (41.67%), Postives = 158/264 (59.85%), Query Frame = 0 Query: 42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYARDP----SCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 P+L Y FE+ ++ + ++D +PIIA + Y+ ++ GR Y++ R + R A WN L+ FS +G +R P L + T + R +C+ P A YG G+ G+WV LF +SK EL+DT +V+ K +FLHWYHH+TVLLY W SY +P G++FV MNYSVHAVMY YYFL +K PKWFNPM++T Q+SQM GVG+TI +F Y +P +C + ++ MY +Y Y F FF+ R++ Sbjct: 30 PLLGATYLPFERFYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRP-----AWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDP-AALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYY 287
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 211.1 bits (536), Expect = 6.000e-51 Identity = 119/279 (42.65%), Postives = 157/279 (56.27%), Query Frame = 0 Query: 24 ITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY-ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 + D L R F ++ P +E LYT FEK ++ ++ +P+ A I+Y + G+ Y +R N A WN FL+ FS +G LR PHL TH +FR +C P T YG G+ G+WV LF +SK EL+DT +V+ K +FLHWYHH+TVLLY W SY +P GI F AMNY+VHA MY YYFL +++ PKWFNPM IT QISQM+ GV TI S+ Y D C + R MY +YL+ F FF R++ Sbjct: 9 VNGDNLEYREFSCLY---PQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKR-----DRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTT-YGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 278
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 200.3 bits (508), Expect = 1.100e-47 Identity = 113/265 (42.64%), Postives = 148/265 (55.85%), Query Frame = 0 Query: 38 FQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY-ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 F S +L FEK ++ ++ +P+ A I+Y + G+ Y +R N A WN FL+ FS +G LR PHL TH +FR +C P T YG G+ G+WV LF +SK EL+DT +V+ K +FLHWYHH+TVLLY W SY +P GI F AMNY+VHA MY YYFL +++ PKWFNPM IT QISQM+ GV TI S+ Y D C + R MY +YL+ F FF R++ Sbjct: 12 FSSYVLLCFALDSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKR-----DRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTT-YGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 270
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX19602.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 196.8 bits (499), Expect = 1.200e-46 Identity = 107/284 (37.68%), Postives = 159/284 (55.99%), Query Frame = 0 Query: 22 QYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKL-EGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIAS--FLYARD-PSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 Q+ R ++++ P Y FE ++ ++DN W+P+ I+Y + GR Y E+R + P+ A WN L+ FS +G LRV P +LF R C P+ + G GA G W +F +SK+ EL DT +V+ K MFLHWYHH++VLL+TW +Y +P G +F++MNY VHA+MY YYFL +++ PKWFNP+WIT+AQISQM GV +T+ + L+ + C + +D+ MY +YL+ F FF ER++ Sbjct: 16 QHCVRFNSGNQKYLDFACLFPTFGKTYLPFELNYDPVGPRDWMKDNFWVPVACAIIYAIAIFWGRSYFEKRAAWNWRAPL------ALWNFGLSLFSTIGFLRVAPFVLFNIYSYTLRENCCFDPE-SHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHVEEREDCLMRKDINQSALVMYGSYLFLFCKFFFERYY 292
BLAST of NO13G01480 vs. NCBI_GenBank
Match: PHJ14924.1 (integral membrane gns1 sur4 family protein [Cystoisospora suis]) HSP 1 Score: 196.1 bits (497), Expect = 2.000e-46 Identity = 107/255 (41.96%), Postives = 155/255 (60.78%), Query Frame = 0 Query: 13 DPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYA 266 D P+ + S Y ++ F+ + + P+L PLYT++E + + ++ +L +A+ILYL G K+++ R+ P +L + FWN FL+ FS +G +RVVPHL+ + F ++C PP YG GA G+W+ LF SK FEL+DT+ ++L+ + FLHWYHH TVLLYTW Y P GIYFVAMNYSVHAVMY YYFL ++++ W +++T+AQISQM GVG+T S Y+ Sbjct: 12 DRRPIGEMSYYPSKS------FLNLEKDYPILRPLYTDYESAYTAGPHLQWTINHYYLAPLASILYLLVCYFGTKWMKNRQ-----PYDLRQPLKFWNLFLSIFSFMGMIRVVPHLMEILRRWGFEVSICSPP-VYTYGHGACGLWIFLFIYSKYFELLDTVFIILRKRPLNFLHWYHHATVLLYTWDGYCVEQPAGIYFVAMNYSVHAVMYFYYFLASQLQRPLSW--GIFVTIAQISQMFVGVGVTCVSLYYS 252
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX09712.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 195.7 bits (496), Expect = 2.600e-46 Identity = 103/264 (39.02%), Postives = 150/264 (56.82%), Query Frame = 0 Query: 42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKL-EGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIAS---FLYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301 P Y FE ++ ++DN W+P+ I+Y + GR Y E+R + P+ A WN L+ FS +G +RV P +LF R C P+ + G GA G W +F +SK+ EL DT +V+ K MFLHWYHH++VLL+TW +Y +P G +F++MNY VHA+MY YYFL +++ PKWFNP+WIT+AQISQM GV +T+ + + C + +D+ MY +YL+ F FF ER++ Sbjct: 101 PTFGKTYFPFELNYDPVGPRDWMKDNFWIPVACAIIYAIAIFWGRSYFEKRSAWNWRAPL------ALWNFGLSLFSTIGFIRVAPFVLFNIYSYTLRENCCFDPE-SHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHFEEREDCLMRKDINQSALLMYGSYLFLFCKFFFERYY 357
BLAST of NO13G01480 vs. NCBI_GenBank
Match: OXB70719.1 (hypothetical protein H355_002100 [Colinus virginianus]) HSP 1 Score: 194.5 bits (493), Expect = 5.800e-46 Identity = 116/260 (44.62%), Postives = 152/260 (58.46%), Query Frame = 0 Query: 52 EKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY--ARDPSCGVVR--------------DMIPWCAG--MYATYLYFF 292 E F+ + +R N +L +A ILYL F G +++++R+ P NL R +WN FL+ FS +G LRV PHLL+M F ++C PP G GA G+W+ LFT SK FEL+DT+ L+L+ + FLHWYHHVTVLLYTW YS P GIYF+AMNY+VHA MY YYFL +++ W +++T+AQISQM GVG+T S Y A +P GV R D C G MY+TY Y F Sbjct: 133 EANFDASFQVKWVRRNYFLAPLAAILYLLFCYFGTRFMKKRE-----PFNLDRPLKWWNLFLSVFSFIGMLRVAPHLLYMLYKWGFEVSICSPP-AYTCGHGATGLWMALFTYSKYFELLDTVFLILRKRQLTFLHWYHHVTVLLYTWDGYSVEQPAGIYFIAMNYTVHAAMYLYYFLAAQLRRPLSW--GVYVTVAQISQMFVGVGVTCVSLYYSFALEPR-GVWRGLQYLQPSKHGHYIDRRNLCYGLLMYSTYFYLF 383
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 194.1 bits (492), Expect = 7.600e-46 Identity = 103/235 (43.83%), Postives = 140/235 (59.57%), Query Frame = 0 Query: 70 LPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARN-PGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY----ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300 +PI A +LY M+ G+ Y R+ P+ A WN FLA FS++G LR P L+ R +C P A YG G+ G+WV LF +SK EL+DT+ +++ K +FLHWYHH+TVLLY W SY ++ PGI+FV MNY+VHA MY YYFL I+ P+W NPM +T QISQM+ GV +T+ F Y A SC + R+ MY +YL+ F+ FF+ R+ Sbjct: 7 VPIGACLLYGLLMVAGQAYFRTRE-----PLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQ-ATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRY 235
BLAST of NO13G01480 vs. NCBI_GenBank
Match: PFH31045.1 (putative integral membrane protein, GNS1/SUR4 family protein [Besnoitia besnoiti]) HSP 1 Score: 191.8 bits (486), Expect = 3.800e-45 Identity = 121/306 (39.54%), Postives = 162/306 (52.94%), Query Frame = 0 Query: 13 DPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIAS----FLYARDPSCGVVRDMIPWCAG-------------MYATYLYFFVLFFMERF 300 D PL + S Y + LN + + P+L LYT+FE + ++ A LYL F G K+++ R +L R +WN LA FS +G RVVPHL + F ++C PP YG GA G+WV LF SK FEL+DT+ ++L+ + FLHWYHH TVLLYTW Y P GIYF+AMNYSVHAVMY YYFL +++ W +++T+AQISQM GVG+T AS F Y + V + P G MY+TYLY F +F++R+ Sbjct: 12 DRRPLGELSTYPVKSALN------LDEEYPILRSLYTDFETTYKAGPCLVWTIGRYYVAPTAVTLYLLFCYFGTKWMKNRP-----AYDLRRPLKYWNLLLAVFSFMGMSRVVPHLFEILRRWGFEVSICSPP-VYTYGHGACGLWVFLFIYSKYFELLDTVFIILRKRPLNFLHWYHHATVLLYTWDGYCVEQPAGIYFIAMNYSVHAVMYFYYFLAAQLQRPLSW--GIFVTIAQISQMFVGVGVTCASLYYAFAYPLENKWTVAQFTDPLSHGQYINSHNLFYGLLMYSTYLYLFAEYFIKRY 303 The following BLAST results are available for this feature:
BLAST of NO13G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01480 ID=NO13G01480|Name=NO13G01480|organism=Nannochloropsis oceanica|type=gene|length=1419bpback to top protein sequence of NO13G01480.1 >NO13G01480.1-protein ID=NO13G01480.1-protein|Name=NO13G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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