NO13G01480, NO13G01480 (gene) Nannochloropsis oceanica

Overview
NameNO13G01480
Unique NameNO13G01480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1419
Alignment locationchr13:444256..445674 +

Link to JBrowse

Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:444256..445674 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Homology
BLAST of NO13G01480 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 220.3 bits (560), Expect = 9.900e-54
Identity = 116/263 (44.11%), Postives = 160/263 (60.84%), Query Frame = 0
Query:   42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVC--EPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYAR-DPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            P LEP Y EFEK ++       +R ++ +P+ A ILY   +  G+  +  R+     P NL R  AFWN  L+ FS +G  R +P LL    H + R  +C       A YG G++G+W +LF +SK  EL+DT  +V+  K  +FLHWYHH+TVLLY W SY   +P GI+F  MNYSVHA MY YYFL  +K+ PKWFNP+ IT+ QISQM+ GV +T+A F Y + DP+CG+  +       MY +YL+ F+ FF  R++
Sbjct:   27 PQLEPFYFEFEKNYDPIPLLEWMRYHSMIPVYAVILYGVLITVGQYAMRNRE-----PFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPTCGIQNENNTAAFVMYGSYLFLFLQFFFGRYF 284          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 211.8 bits (538), Expect = 3.500e-51
Identity = 110/264 (41.67%), Postives = 158/264 (59.85%), Query Frame = 0
Query:   42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYARDP----SCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            P+L   Y  FE+ ++   +   ++D   +PIIA + Y+  ++ GR Y++ R        +  R  A WN  L+ FS +G +R  P L +  T  + R  +C+ P  A YG G+ G+WV LF +SK  EL+DT  +V+  K  +FLHWYHH+TVLLY W SY   +P G++FV MNYSVHAVMY YYFL  +K  PKWFNPM++T  Q+SQM  GVG+TI +F Y  +P    +C + ++       MY +Y Y F  FF+ R++
Sbjct:   30 PLLGATYLPFERFYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRP-----AWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDP-AALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYY 287          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 211.1 bits (536), Expect = 6.000e-51
Identity = 119/279 (42.65%), Postives = 157/279 (56.27%), Query Frame = 0
Query:   24 ITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY-ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            +  D L  R F  ++   P +E LYT FEK ++       ++    +P+ A I+Y   +  G+ Y  +R        N     A WN FL+ FS +G LR  PHL    TH +FR  +C  P T  YG G+ G+WV LF +SK  EL+DT  +V+  K  +FLHWYHH+TVLLY W SY   +P GI F AMNY+VHA MY YYFL  +++ PKWFNPM IT  QISQM+ GV  TI S+ Y   D  C + R        MY +YL+ F  FF  R++
Sbjct:    9 VNGDNLEYREFSCLY---PQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKR-----DRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTT-YGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 278          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 200.3 bits (508), Expect = 1.100e-47
Identity = 113/265 (42.64%), Postives = 148/265 (55.85%), Query Frame = 0
Query:   38 FQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY-ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            F S  +L      FEK ++       ++    +P+ A I+Y   +  G+ Y  +R        N     A WN FL+ FS +G LR  PHL    TH +FR  +C  P T  YG G+ G+WV LF +SK  EL+DT  +V+  K  +FLHWYHH+TVLLY W SY   +P GI F AMNY+VHA MY YYFL  +++ PKWFNPM IT  QISQM+ GV  TI S+ Y   D  C + R        MY +YL+ F  FF  R++
Sbjct:   12 FSSYVLLCFALDSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKR-----DRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTT-YGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 270          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX19602.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 196.8 bits (499), Expect = 1.200e-46
Identity = 107/284 (37.68%), Postives = 159/284 (55.99%), Query Frame = 0
Query:   22 QYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKL-EGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIAS--FLYARD-PSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            Q+  R     ++++      P     Y  FE  ++       ++DN W+P+   I+Y   +  GR Y E+R     + P+      A WN  L+ FS +G LRV P +LF       R   C  P+ +  G GA G W  +F +SK+ EL DT  +V+  K  MFLHWYHH++VLL+TW +Y   +P G +F++MNY VHA+MY YYFL  +++ PKWFNP+WIT+AQISQM  GV +T+ +   L+  +   C + +D+      MY +YL+ F  FF ER++
Sbjct:   16 QHCVRFNSGNQKYLDFACLFPTFGKTYLPFELNYDPVGPRDWMKDNFWVPVACAIIYAIAIFWGRSYFEKRAAWNWRAPL------ALWNFGLSLFSTIGFLRVAPFVLFNIYSYTLRENCCFDPE-SHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHVEEREDCLMRKDINQSALVMYGSYLFLFCKFFFERYY 292          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: PHJ14924.1 (integral membrane gns1 sur4 family protein [Cystoisospora suis])

HSP 1 Score: 196.1 bits (497), Expect = 2.000e-46
Identity = 107/255 (41.96%), Postives = 155/255 (60.78%), Query Frame = 0
Query:   13 DPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLYA 266
            D  P+ + S Y ++       F+ + +  P+L PLYT++E  +      +   ++ +L  +A+ILYL     G K+++ R+     P +L +   FWN FL+ FS +G +RVVPHL+ +     F  ++C PP    YG GA G+W+ LF  SK FEL+DT+ ++L+ +   FLHWYHH TVLLYTW  Y    P GIYFVAMNYSVHAVMY YYFL ++++    W   +++T+AQISQM  GVG+T  S  Y+
Sbjct:   12 DRRPIGEMSYYPSKS------FLNLEKDYPILRPLYTDYESAYTAGPHLQWTINHYYLAPLASILYLLVCYFGTKWMKNRQ-----PYDLRQPLKFWNLFLSIFSFMGMIRVVPHLMEILRRWGFEVSICSPP-VYTYGHGACGLWIFLFIYSKYFELLDTVFIILRKRPLNFLHWYHHATVLLYTWDGYCVEQPAGIYFVAMNYSVHAVMYFYYFLASQLQRPLSW--GIFVTIAQISQMFVGVGVTCVSLYYS 252          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: GAX09712.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 195.7 bits (496), Expect = 2.600e-46
Identity = 103/264 (39.02%), Postives = 150/264 (56.82%), Query Frame = 0
Query:   42 PVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKL-EGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIAS---FLYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW 301
            P     Y  FE  ++       ++DN W+P+   I+Y   +  GR Y E+R     + P+      A WN  L+ FS +G +RV P +LF       R   C  P+ +  G GA G W  +F +SK+ EL DT  +V+  K  MFLHWYHH++VLL+TW +Y   +P G +F++MNY VHA+MY YYFL  +++ PKWFNP+WIT+AQISQM  GV +T+ +     +     C + +D+      MY +YL+ F  FF ER++
Sbjct:  101 PTFGKTYFPFELNYDPVGPRDWMKDNFWIPVACAIIYAIAIFWGRSYFEKRSAWNWRAPL------ALWNFGLSLFSTIGFIRVAPFVLFNIYSYTLRENCCFDPE-SHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHFEEREDCLMRKDINQSALLMYGSYLFLFCKFFFERYY 357          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: OXB70719.1 (hypothetical protein H355_002100 [Colinus virginianus])

HSP 1 Score: 194.5 bits (493), Expect = 5.800e-46
Identity = 116/260 (44.62%), Postives = 152/260 (58.46%), Query Frame = 0
Query:   52 EKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY--ARDPSCGVVR--------------DMIPWCAG--MYATYLYFF 292
            E  F+     + +R N +L  +A ILYL F   G +++++R+     P NL R   +WN FL+ FS +G LRV PHLL+M     F  ++C PP     G GA G+W+ LFT SK FEL+DT+ L+L+ +   FLHWYHHVTVLLYTW  YS   P GIYF+AMNY+VHA MY YYFL  +++    W   +++T+AQISQM  GVG+T  S  Y  A +P  GV R              D    C G  MY+TY Y F
Sbjct:  133 EANFDASFQVKWVRRNYFLAPLAAILYLLFCYFGTRFMKKRE-----PFNLDRPLKWWNLFLSVFSFIGMLRVAPHLLYMLYKWGFEVSICSPP-AYTCGHGATGLWMALFTYSKYFELLDTVFLILRKRQLTFLHWYHHVTVLLYTWDGYSVEQPAGIYFIAMNYTVHAAMYLYYFLAAQLRRPLSW--GVYVTVAQISQMFVGVGVTCVSLYYSFALEPR-GVWRGLQYLQPSKHGHYIDRRNLCYGLLMYSTYFYLF 383          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 194.1 bits (492), Expect = 7.600e-46
Identity = 103/235 (43.83%), Postives = 140/235 (59.57%), Query Frame = 0
Query:   70 LPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARN-PGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQMLAGVGITIASFLY----ARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERF 300
            +PI A +LY   M+ G+ Y   R+     P+      A WN FLA FS++G LR  P L+        R  +C  P  A YG G+ G+WV LF +SK  EL+DT+ +++  K  +FLHWYHH+TVLLY W SY  ++ PGI+FV MNY+VHA MY YYFL  I+  P+W NPM +T  QISQM+ GV +T+  F Y    A   SC + R+       MY +YL+ F+ FF+ R+
Sbjct:    7 VPIGACLLYGLLMVAGQAYFRTRE-----PLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQ-ATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRY 235          
BLAST of NO13G01480 vs. NCBI_GenBank
Match: PFH31045.1 (putative integral membrane protein, GNS1/SUR4 family protein [Besnoitia besnoiti])

HSP 1 Score: 191.8 bits (486), Expect = 3.800e-45
Identity = 121/306 (39.54%), Postives = 162/306 (52.94%), Query Frame = 0
Query:   13 DPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTEFEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPVNLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGYGDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP-GIYFVAMNYSVHAVMYSYYFL-TEIKLWPKWFNPMWITMAQISQMLAGVGITIAS----FLYARDPSCGVVRDMIPWCAG-------------MYATYLYFFVLFFMERF 300
            D  PL + S Y  +  LN      + +  P+L  LYT+FE  +             ++   A  LYL F   G K+++ R        +L R   +WN  LA FS +G  RVVPHL  +     F  ++C PP    YG GA G+WV LF  SK FEL+DT+ ++L+ +   FLHWYHH TVLLYTW  Y    P GIYF+AMNYSVHAVMY YYFL  +++    W   +++T+AQISQM  GVG+T AS    F Y  +    V +   P   G             MY+TYLY F  +F++R+
Sbjct:   12 DRRPLGELSTYPVKSALN------LDEEYPILRSLYTDFETTYKAGPCLVWTIGRYYVAPTAVTLYLLFCYFGTKWMKNRP-----AYDLRRPLKYWNLLLAVFSFMGMSRVVPHLFEILRRWGFEVSICSPP-VYTYGHGACGLWVFLFIYSKYFELLDTVFIILRKRPLNFLHWYHHATVLLYTWDGYCVEQPAGIYFIAMNYSVHAVMYFYYFLAAQLQRPLSW--GIFVTIAQISQMFVGVGVTCASLYYAFAYPLENKWTVAQFTDPLSHGQYINSHNLFYGLLMYSTYLYLFAEYFIKRY 303          
The following BLAST results are available for this feature:
BLAST of NO13G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OEU18932.19.900e-5444.11GNS1/SUR4 membrane protein [Fragilariopsis cylindr... [more]
XP_002293395.13.500e-5141.67long chain fatty acid elongase [Thalassiosira pseu... [more]
GAX19603.16.000e-5142.65elongation of very long chain fatty acids protein ... [more]
GAX09713.11.100e-4742.64elongation of very long chain fatty acids protein ... [more]
GAX19602.11.200e-4637.68elongation of very long chain fatty acids protein ... [more]
PHJ14924.12.000e-4641.96integral membrane gns1 sur4 family protein [Cystoi... [more]
GAX09712.12.600e-4639.02elongation of very long chain fatty acids protein ... [more]
OXB70719.15.800e-4644.62hypothetical protein H355_002100 [Colinus virginia... [more]
XP_002184740.17.600e-4643.83predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PFH31045.13.800e-4539.54putative integral membrane protein, GNS1/SUR4 fami... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001746NSK001746Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01480.1NO13G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557839gene_6859Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100399g1gene8619Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01480.1NO13G01480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01480 ID=NO13G01480|Name=NO13G01480|organism=Nannochloropsis oceanica|type=gene|length=1419bp
ATGTCGGCAATGTCACTACCCCCGTGGCTATGGCAAGACCCCACCCCTCT
TTACAAAACAAGCCAGTATATCACTCGCGACCCCTTGAACCCGCGGCGGT
TCGTGCAAGTATTTCAATCCATCCCAGTCCTTGAACCGCTCTATACCGAG
TTTGAGAAAAAATTTAATGTGAAGGAATCGTATCGCATCATCCGGGACAA
CACCTGGCTGCCCATAATTGCCACCATTCTGTACCTCTCCTTCATGATCG
AAGGCCGAAAATACGTGGAACGCCGGAAGCTTGAGGGCAAAGGACCCGTG
AATCTGGGACGATTCCCAGCGTTCTGGAATGCTTTCCTGGCGTCGTTTTC
CATTCTAGGTACCTTGCGCGTAGTGCCGCATCTGTTGTTCATGTTCACGC
ATAAGAATTTCAGGGGGACGGTTTGCGAGCCGCCTGATACGGCGGGGTAT
GGTGATGGGGCGGCGGGGATGTGGGTGATGCTATTTACGGTTTCCAAGGT
CTTTGAATTGGTGGACACGATGATCTTGGTGTTGAAGGGGAAGAATCCTA
TGTTTCTGCATTGgtgaggaagacgtgtgggaggagggagggagggatgg
agggatggcgggcgggaaaagcattcgaaatatcaccatacttattccac
tcgtcgctctcttcgtcccgactcttcaccacagGTACCACCACGTGACG
GTGCTCCTCTACACATGGTTCTCCTACTCGGCTCGCAATCCCGGCATTTA
TTTCGTCGCCATGAACTACTCCGTGCACGCCGTCATGTACTCCTACTACT
TCCTGACGGAGATCAAGCTCTGGCCGAAATGGTTCAAgtatgtgcccttc
tttccctctcgctcttccttactccctccctttctccttcttcccttcat
tgcgtcattcatttccacaaggatcccccttccttccacccaccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccagCCCTATGTGGATCACCATGGCCCAAATA
TCGCAGATGCTTGCCGGGGTCGGTATCACCATCGCCTCGTTCCTCTACGC
CCGTGACCCTTCCTGCGGAGTTGTTCGGGATATGATTCCCTGGTGCGCGG
GGATGTACGCGACCTACCTGTACTTCTTCGTCTTGTTTTTCATGGAGCGT
TTCTGGCCGTCCATTTTGAATTCATCATCATCATCATCATCATCATCATC
ATCATCATCGTCATCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCGTCAA
GAAGAAAATGGAAGGAGTTGGGACGGGGGGAGAATAATGAGGCAGGAACA
GCTCCGGCGGCTGGAGGGGTGGGAAGGAGGACAGCCACGAGGGGAGGAAA
GTCTAGGAAAGAAGAATAG
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protein sequence of NO13G01480.1

>NO13G01480.1-protein ID=NO13G01480.1-protein|Name=NO13G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MSAMSLPPWLWQDPTPLYKTSQYITRDPLNPRRFVQVFQSIPVLEPLYTE
FEKKFNVKESYRIIRDNTWLPIIATILYLSFMIEGRKYVERRKLEGKGPV
NLGRFPAFWNAFLASFSILGTLRVVPHLLFMFTHKNFRGTVCEPPDTAGY
GDGAAGMWVMLFTVSKVFELVDTMILVLKGKNPMFLHWYHHVTVLLYTWF
SYSARNPGIYFVAMNYSVHAVMYSYYFLTEIKLWPKWFNPMWITMAQISQ
MLAGVGITIASFLYARDPSCGVVRDMIPWCAGMYATYLYFFVLFFMERFW
PSILNSSSSSSSSSSSSSSSSSSSSSSSSSSRRKWKELGRGENNEAGTAP
AAGGVGRRTATRGGKSRKEE*
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Synonyms
Publications