NO13G01460, NO13G01460 (gene) Nannochloropsis oceanica

Overview
NameNO13G01460
Unique NameNO13G01460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3893
Alignment locationchr13:435715..439607 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:435715..439607 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G01460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01460.1NO13G01460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01460.1NO13G01460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01460 ID=NO13G01460|Name=NO13G01460|organism=Nannochloropsis oceanica|type=gene|length=3893bp
ACCACACAGACAGGGCGCATGTACGGGGGCCTCTGAGCGCTGCATTTTTG
TGGTGGGCCCGGCCCATGATCCTTGCATCTGCTCCTCCCACTGACCCTCT
AGCCGCAATCGTCGCACAGCACATCCCAGGGATCACGCTTTCCAGCAATA
AGCTAATGTCGTCCGCCCTATTTCTTCACCCTTGGCCCTTCTGTAGTCAA
CGTGATGTGGAGGCCTTGATGGACCATTATGAAGAGGACGGCGACACCCC
CGGCGCCTTCGCGGCTATGCAGCCCATTTCCTATGGGGGCCAGCGTCGAG
ACGGTTATAATTTGACCCTGATGCAAAAAACACACCTCTCTCATGTCTTC
GGTTGGACCAACCCGGGCGTTGTGGCCACATTTAGCGGTCCTCTCTCTTC
GCTTGAAGAAGACAACCAGATAGTTGCTGCTGCCGCAGCAACGGGTGCCG
GGGAGATGCCTGGAGCACCACCAGGCGCAACGATGACGACGACATATATC
GCGTACAGTGATGTGGATCTCATTGATGATGCTAGTCCCAGTTGTAGTGG
TAGCAGCAGCAGTGGTAGCACCAGCAACAGCACAGGGCATTTCCTCCCGA
GCCCGCGCGCCTTGCTGGGCACTGGCGGGCTTATCAAGCTAGAGGCTTTG
GTGGTCAAGGCTGTGCACCCGATCAACGACAGCAGCGACAGCAAGATGAG
CAACACGATTTCGCAGGGTGGCAAGAAAGAGGGGGAGAATGGTGGCGCCA
CTCTCGCCCTCATGACCAAGGAGGAGCTCGCCCGCGTGTTATTGCACCAT
GCCGCACAGCTGCCACAGTCAACGACACCCACCGCAGCGATCAACATCAG
CAGCAGCAGTAGCAGCAACACCACCACATCACCCTCTCTGATTGTCGATC
TGCATCAGCGGCACGACGACACATCAGCCATGGTGCTGGGCTTGCCCTCC
ATCGTTCCTACTTCCCACCTCCACCCTGACGTAACCCTCCCGGTCCTCTC
CTCCTCTACCACCCCTTTCTCGCCGATAAATTGCTCCCCAAAACACCAGA
GTATCAATCCGCAGCAACAGCAGCAGCAACAACAGAGCGAGACGCGACTT
CAAATGCAGGACAAGCGTCAAACCATGCAAAGGGTGAAGGCCGAGGTGCT
TCGTTTGATTGAGTCGGATGATGAAGTGGAGGAGGAAGTGAAGGAGGGAG
GGAAGGAGGGCCTAGGCCCCCACAACGGCGATGCTTTCGATAGTGAGGAG
GAGGAAGAGGAGTATGAGAAAGGGAAGGAAGGATTGACGGACGAGGGCAA
TTGGTGGGCGGAGGAGGGGAGTGATAGTAGCGTGTGCAAGAGGGAGCCAT
CTTTCTCAGCCTTCACATTGTTGTCGCCTTCCGTTGACGGCTATATCCCG
CACGACTACTTTGCCACGGCTTCCTTGTGGACTAGCAGCAGCAGCAGTAG
TGTTAACAGTACTAATACTTCTTCTTCCTCTTCTTTTGCTTCTTTCTCTC
CGGTCGGTGGCAGTAGCACGAACCAAGGCGCGACGCGATCAATGCTAAGC
ACCTCTCCTTGGGGTCAAACCTCGGTTGTCACCTCTCCTTCCTCTATCTC
TTCCTACTCCTGTTTCCCCCTACCTGCGGCCGCAGGAAGTTCTTCCGAAT
TTGATCTGACGGCCGCTGCTTCGGCTGCTGCTGCCAGTGCTGCTGCTGCT
AGTGGTGGTGGTGGTGATGGTGATGGCAGCACCGTGGGTCTGCAAAAGTT
ATCCGATAGGTTGGCGAAGATGACCTTTGTCGGGTCTTTCAACAACAGCA
GCAGCAACAGCAGCAGCACGAGGCTCGCTTCAACTAAACCATTTAACACT
TTCTCTCTTTCTTCCGGGTACACTCCCTCCGCGGTAGGAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAACAACAACGATGAGTGCAAATTTTTCTT
GTCGTGTACACGGTGGAGCAGCAACAGCTATAACGGCAGCAGAAGAGATG
AATGAGCTACTAGGACAACAGATATGGCCGCAATACATTCAGTACCAGCA
GCAGGAGCAGCAGCAGATCAAGAAACTCCAGAAGCAGGGGGAGCAGAAGC
AGCAGGATGGAGGAGAAGGAGGAATACCGCGTGCAAGGCGTCAGACTCGC
AGGGGCCGCCGTGGCCAAGGACGACGCAAGAGAGCAGCCGAGGCACGGAT
GGCCGCGCGTTGGGTAAGGGGCAGCATTTCGGTGGAGGACGGACGAGAGG
AGGAGGGAGGGAAGGAAGACGGCCGGAAATATTGTGATGATTGGGGGAGC
ATCGATGAGGGACCAGTAGCTGAAGCGGAGCAGCAGGAGCAGCAGGAGCA
TCAGCAGGAGCAGCAGCGGTACTATCAGCAGGAACAGCCACAGTATCAGC
AGCAGCAGTTCTTCCCCTCCCCCCCCACTCCTGCTTCAGCGTCTGTCCCT
TCCTCTTACCTGCCCTCCCCCTCCTCCTACCCCCCCCTTACTCCTCCTTA
TATCTCTATAATTTCTACCCACCACCACCACCAGCAGCAAATCCACCTCG
CTTCTTCCTGCCCATATTCCGCCCGCTCTGTCTCTCATGCCTATCAGCAT
GCCAGCACCAACCCACGCATATATCCTCTTCCTCTTCCTTCCTCCTGTAT
CGATACCGGGTACTGCTCTTTGTCTTCACCTCCTCCTGTTATCCCTCTTT
CGAAGCCTTTGAGTCCTCCTTCTCATTCTCGCCCCCTTCATGGCATCATT
GCGCATCTTCCCTCCCGTGCTCCAGTTGCTGGGCCGGCTGTGGCTGCGGC
TGCAGCCGCCGCAGCCGCAGCTTCTTTTGGTCCACGGAGTTGAAAACAGC
ATGTGTCAACAAGTGAGGAGCGCGGAAAAGAGTGTACATACATGGATAGA
GGAAAAAGAATGTGTGAGAGCAAGCGGCTACGAGATAGACATGAAGAGAG
AGATTAAAGAGGGATGGATTGAAGAGATGAAAGAGGAAGGCAGAAGCAGA
AACAGATATGTGTACAGGACGAGAACGTTGAAGAGATCAAAGATGGCCAC
GAGAGAGGACGAGGGAATAGAGAATGCAAGAAAGAGAGACATACAGAAAG
AAAAGTGCATGGCACAGTGGATGGGCGAACATGAATAAAAGGGAAGAGAG
GTGCAAAGACTGGAAGTGGGGGGGTGGGGGTGGGGAAAGACGAAGGCATG
CATGAGTGACTGAGATGTGCGCGTACCTATGTAACCCCCGGCCTTGCCTG
TACAACGTAGAGAGACAGTATTTCACAGTATAATAAGAGCCCTAGCGAGC
TCTTTTGAAAATCATCGGCTGATTCTCACTACCGGCAACACAACCAAAGA
TAAACGAATGGGGACTATCAGCATGGAAAGAGGGGCAACTAAGAATATGA
AAAATACAAACCAGCTAGACATCGATACAACCCACAAAAGCGAGAGGACC
TACAATAGAAGCATCAGAAATTGTTTCAGCAGCTTAAACAAGTTCAAGCA
GCGAAGCAAAAGCAGCAGGGCAAAGCCATCATGCCTCGCACCGCCGCCGT
CCTTCATAGTTGCCCGGGGCCAGCGCGTGACGGCTGCACCTTTAAAACAA
AATTTCCTTGACCAGGAAGCCCCTCTTATCCCATGAATGTTTTTGAATTC
AAGCTTTGAAACGTCGAGAAAAAAGAGGTACGACGATTTGGATGTGTATG
TATGTGTGTTTGTGTGTATTCTGCACGGTGAATGTCTGAAGGTAATACAA
GCGACAAGGGCGAATACGCATGAAAGAAGGGGGAACACAATTTTTACAGG
GAAAAAGAGACGACCACATAAGGCGGCGGGAAATATGAATGATTTGTAGT
GAGCCGGATACTCATCAAATGGAATCAGTACAACAAAAAAAGA
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protein sequence of NO13G01460.1

>NO13G01460.1-protein ID=NO13G01460.1-protein|Name=NO13G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=926bp
MILASAPPTDPLAAIVAQHIPGITLSSNKLMSSALFLHPWPFCSQRDVEA
LMDHYEEDGDTPGAFAAMQPISYGGQRRDGYNLTLMQKTHLSHVFGWTNP
GVVATFSGPLSSLEEDNQIVAAAAATGAGEMPGAPPGATMTTTYIAYSDV
DLIDDASPSCSGSSSSGSTSNSTGHFLPSPRALLGTGGLIKLEALVVKAV
HPINDSSDSKMSNTISQGGKKEGENGGATLALMTKEELARVLLHHAAQLP
QSTTPTAAINISSSSSSNTTTSPSLIVDLHQRHDDTSAMVLGLPSIVPTS
HLHPDVTLPVLSSSTTPFSPINCSPKHQSINPQQQQQQQQSETRLQMQDK
RQTMQRVKAEVLRLIESDDEVEEEVKEGGKEGLGPHNGDAFDSEEEEEEY
EKGKEGLTDEGNWWAEEGSDSSVCKREPSFSAFTLLSPSVDGYIPHDYFA
TASLWTSSSSSSVNSTNTSSSSSFASFSPVGGSSTNQGATRSMLSTSPWG
QTSVVTSPSSISSYSCFPLPAAAGSSSEFDLTAAASAAAASAAAASGGGG
DGDGSTVGLQKLSDRLAKMTFVGSFNNSSSNSSSTRLASTKPFNTFSLSS
GYTPSAVGAAAAAAAAAAATTTMSANFSCRVHGGAATAITAAEEMNELLG
QQIWPQYIQYQQQEQQQIKKLQKQGEQKQQDGGEGGIPRARRQTRRGRRG
QGRRKRAAEARMAARWVRGSISVEDGREEEGGKEDGRKYCDDWGSIDEGP
VAEAEQQEQQEHQQEQQRYYQQEQPQYQQQQFFPSPPTPASASVPSSYLP
SPSSYPPLTPPYISIISTHHHHQQQIHLASSCPYSARSVSHAYQHASTNP
RIYPLPLPSSCIDTGYCSLSSPPPVIPLSKPLSPPSHSRPLHGIIAHLPS
RAPVAGPAVAAAAAAAAAASFGPRS*
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Synonyms
Publications