NO13G01210, NO13G01210 (gene) Nannochloropsis oceanica

Overview
NameNO13G01210
Unique NameNO13G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1674
Alignment locationchr13:369386..371059 +

Link to JBrowse

Properties
Property NameValue
DescriptionDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:369386..371059 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011053Single_hybrid_motif
IPR036625E3-bd_dom_sf
IPR000089Biotin_lipoyl
IPR0010782-oxoacid_DH_actylTfrase
IPR004167E3-bd
Homology
BLAST of NO13G01210 vs. NCBI_GenBank
Match: EWM21801.1 (pyruvate dehydrogenase component x [Nannochloropsis gaditana])

HSP 1 Score: 640.6 bits (1651), Expect = 4.600e-180
Identity = 398/557 (71.45%), Postives = 448/557 (80.43%), Query Frame = 0
Query:    1 MMRRGLLASSRHHALGRATNPAHATLKSGSGSRRGLFSILTKPLTAEVVGSISRSSSGSMGITGFHLSRPTSLQPTRRGFAAVPEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            MMR+ +++ +R  AL +A +       S S SRR L + + +PL        SR     M   GF+  R ++   +RRGFA +PE +TI+MP+LSPTMTHGTISEWTKKPGD+C AGDVLCEIETDKAVV++DVQDE VLAKILE+AKGREI+VG PVA+SVED+AAY+AFVEADKAG+I  P      XXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHL+HS+ LTLS +V GTGKGGRLTKGDVI+AI+NGQ  A  XXXXXXXXX                              V I  I A PGTF+D+KNSNMRK+IARRLAESKATVPH YETVDCEID VL+FRK++Q+++EV+VSVND IIRSAALALRDVPEANAFWDG +GTAVL + VDISVAVATP GLITPII+ SDRRRL+EISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAP ++  Q  G+LKPY+ATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL
Sbjct:    1 MMRQRVISFTRRFALKQAASCGTTPHASVSTSRRRL-AHMARPLFFLSCSDGSR----PMLNMGFYAGRKSACLMSRRGFADLPEVSTIVMPALSPTMTHGTISEWTKKPGDVCEAGDVLCEIETDKAVVAFDVQDECVLAKILEEAKGREIQVGMPVALSVEDKAAYEAFVEADKAGKIATPST--EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLLHSRQLTLSAEVHGTGKGGRLTKGDVIQAIANGQAQAXXXXXXXXXXXGLDP------------------------AQVGIPTIQAGPGTFSDTKNSNMRKVIARRLAESKATVPHAYETVDCEIDAVLSFRKQMQRDFEVNVSVNDFIIRSAALALRDVPEANAFWDGPKGTAVLKEDVDISVAVATPAGLITPIISGSDRRRLSEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPPYLPDQHAGNLKPYTATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 526          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: CBJ29861.1 (Dihydrolipoamide S-acetyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 362.5 bits (929), Expect = 2.400e-96
Identity = 244/495 (49.29%), Postives = 309/495 (62.42%), Query Frame = 0
Query:   63 TGFHLSRPTSLQPTRRGFAAVPEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            TG  +  P   + T R   +  +FT + MP+LSPTM  GT++EW K PGD   AGDV+C++ETDKA V++DVQD+ VLA+I+ +A   E+ VG PVA+ VED  AY AFV+AD AGE                                                       S+ +  S+ + GTGKGGR+TK D++ A++ G                 XXXXXXXXXXXXXXXXXXXXXXXXX               F D   +N++KI A+RL +SKA VPH+Y ++ CE+D ++ FRK LQKE++V VSVND+IIRSAALALRDVPEANA W G  G     + +DISVAVATPTGLITPI+T +D+R L+ IS  ++DLA RAR  +LKPEEFQGGSFT+SNLGMFGI+EFSAVIN PQA I+AVG GA +V+      G++ G  KP   + +T  LS DRRV+DEA+AAQ LQ+FK YM  PELLL+
Sbjct:  847 TGIGMQLP---RQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDADAYAAFVKADAAGE-------------------------------------------------------SKGIDASS-LEGTGKGGRITKADLVLALAKG------------VEFPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKALQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSG--GARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKP-----GREAGD-KPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETPELLLM 1262          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: XP_002181796.1 (dihydrolipoamide acetyl transferase, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47010.1 dihydrolipoamide acetyl transferase, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 360.5 bits (924), Expect = 9.200e-96
Identity = 236/478 (49.37%), Postives = 297/478 (62.13%), Query Frame = 0
Query:   84 PEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGR-EIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNG---QVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            P  T   MP+LSPTM  GTI+ W K+ GD   AGDVLC IETDKA V ++ QD+ VLAKIL  A    +I  G P+ ++VE+  A  AF +   A +                    XXXXXXXXXXXXXXXXXX       L PAARHL  S+ L  +T + G+GKGGR+TKGDV++AI++G    +TA P                                    LP  H   +HA  G+FAD+ NS MRKIIA RL ESKATVPH Y +++  +D +L  RK+L  +++V VSVND IIRS+ALALRDVPE N  +D    T  LN  +D+SVAVATPTGLITPII  SD+  L+ ++AT++DLA RAR GKL P E+QGG+F++SNLGMFG+DEFSAVINPPQAAI+AVG GA+RV    +V+        P   T++T  LS DRRV+DEA AA FL A + Y+ +P LL+L
Sbjct:    5 PAHTVFPMPALSPTMESGTITAWHKQEGDAFIAGDVLCSIETDKASVDFEAQDDGVLAKILHQADAALDIVCGTPICVAVEEHQAVAAFADYTVAHD--------------SSAESGXXXXXXXXXXXXXXXXXXXXXXXXILLPAARHLAESRGLN-ATVLSGSGKGGRVTKGDVLQAIADGTLPPLTADP-----------------------------TATVPTELPVPH---VHAAEGSFADTPNSKMRKIIASRLTESKATVPHFYTSMEIPLDAILALRKQLASQHDVKVSVNDFIIRSSALALRDVPEVNGTYDAHSDTVRLNDSIDVSVAVATPTGLITPIIFQSDQLGLSALTATIRDLATRARDGKLAPHEYQGGTFSVSNLGMFGVDEFSAVINPPQAAILAVGGGARRVVPGTYVVDAPENRTSPTVHTILTGRLSADRRVVDEATAALFLAALERYLRQPALLML 435          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: OEU21088.1 (2-oxoacid_dh-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 336.3 bits (861), Expect = 1.900e-88
Identity = 218/478 (45.61%), Postives = 284/478 (59.41%), Query Frame = 0
Query:   84 PEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDA-KGREIKVGEPVAISV---EDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            P  T +  P+LSPTM  GTI+ W    GD   AG VLC IETDKA + Y+ QD+  +AKIL D     ++ +G P+AI V   ED AA+  +V  +  G   +                       XXXXXXXXXXX    G   L P+AR L  S+ L  +T ++G+GKGGR+TKGDV+ AI +G    TP                                    LP V         GT+ D  N+NMRKI+A+RL  SK  VP  Y +++ E+D V+  RK+L K++++ VSVND+++R +A+ALRDVPEAN  +D K  T  L   +DIS+AVA P GLITPI+  +D+  LTEIS  ++DLAGRAR GKL PEE+ GG+F ISNLGMFGIDEF+A++NPPQAAI+AVG G KR+    +V G +    KP   T+MTA LS DRRV+DEA A+ FL AFK Y+++PELLLL
Sbjct:   62 PVHTVLPFPALSPTMETGTIANWELSEGDEFSAGSVLCSIETDKATMDYEAQDDGFIAKILRDGPDASDLPIGTPIAIVVEELEDVAAFADYVVLEDEGNAGV---------GDVSASSADAPIAPXXXXXXXXXXXGGDSGTSFLLPSARFLAESKGLD-ATGLKGSGKGGRVTKGDVLAAIRDG----TP---------------------MPALAIPTGPVVDLPLPEVDTY------GTYEDVPNNNMRKIVAKRLTFSKQEVPCTYTSMEVELDNVMKLRKQLLKDHDIKVSVNDIVVRCSAMALRDVPEANGSYDPKTDTVKLQDSIDISIAVAIPNGLITPIVMNTDKLGLTEISDKVRDLAGRARDGKLAPEEYTGGTFCISNLGMFGIDEFTAIVNPPQAAILAVGGGVKRIVPTPYVDGAE-EQAKPTIKTIMTARLSSDRRVIDEATASLFLLAFKHYINKPELLLL 497          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: GAX25490.1 (pyruvate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 329.7 bits (844), Expect = 1.700e-86
Identity = 227/492 (46.14%), Postives = 296/492 (60.16%), Query Frame = 0
Query:   76 TRRGFAAV-------PEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKIL-EDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVM--GQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            +RRG+++        P  T   MP+LSPTM  GTIS W+K  GD   AGD LC IETDKA V ++ QD+ ++AKIL E A   ++ VG P+ + V+D +   AF +    G +E P                                  A  G   L P+ARHL  S  L  +T + G+GKGGR+TKGDV++A++ G +             XXXXXXXXXXXXXXXXXX         LP V         G   D  N+ MRKIIA+RL ESK  VPH Y T + E+D ++  RK+L  ++E+ +SVND +++ +A+ALRDVP  NA +  K  T      +DISVAVATPTGLITPI+  +D+  L+++++T+ DLA RAR GKL P+E+QGGSF++SNLGMFGI EFSAVINPPQAAI+AVG GAK     +FV+  G +   L P  A  MTA LS DRRV+DEA A  F+ AF+ YM++PELLLL
Sbjct:   15 SRRGYSSTLLLRKEYPPHTLYPMPALSPTMETGTISAWSKGVGDEFAAGDSLCTIETDKAAVDFEAQDDGIIAKILREGANAIDMPVGTPICVVVDDASDVAAFADFQIGGILEPPQ-----------------EAVSASVSSTAESTPVAATGSSILFPSARHLAESNGLD-ATGLAGSGKGGRVTKGDVLQAMAAGSL--PKLVKAAAPTVXXXXXXXXXXXXXXXXXXKPMTLADLILPTVE-------TGIEEDIPNTKMRKIIAQRLTESKREVPHFYTTHEVELDAIMKLRKKLANDHEIKISVNDFVLKCSAMALRDVPRVNAQY--KSDTVTYLDSIDISVAVATPTGLITPILFGADKLGLSQVTSTVLDLATRARDGKLAPQEYQGGSFSVSNLGMFGIREFSAVINPPQAAILAVGGGAK-----QFVVRRGPEGEKLPPGVAMRMTACLSADRRVVDEATAGLFMAAFREYMNKPELLLL 472          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: GAX20184.1 (pyruvate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 322.4 bits (825), Expect = 2.800e-84
Identity = 205/491 (41.75%), Postives = 274/491 (55.80%), Query Frame = 0
Query:   77 RRGFAAV-------PEFTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKIL-EDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVM--GQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            RRG+++        P  T   MP+LSPTM  GTIS W+K  GD   AGD LC IETDKA V ++ QD+ ++AKIL E A   ++ VG P+ + V++ +   AF +    G +E P                                  A  G   L P+ARHL  S  L  +T + G+GKGGR+TK DV++A++ G +                                        LP +         G   D  N+ MRKIIA+RL ESK  VPH Y T + E+D ++  RK+L  ++E+ +SVND +++ +A+ALRDVP  NA +  K  T      +DISVAVATPTGLITPI+  +D+  L ++++ + DLA RAR GKL P+E+QGGSF++SNLGMFGI EFSAVINPPQAAI+AVG GAK     +FV+  G +   L P  A  MTA LS DRRV+DEA A  F+ AF+ YM++PELLLL
Sbjct:   16 RRGYSSTHSLRKEYPPHTLYPMPALSPTMETGTISAWSKGVGDEFAAGDSLCTIETDKAAVDFEAQDDGIIAKILREGANAIDMPVGTPICVVVDEASDVAAFADFQIGGIVEPP-----------------KEAVSAPAPSIVAAPPMASTGSSILFPSARHLAESNGLD-ATGLVGSGKGGRVTKADVLQAMAAGSL--PKLVKAAAPTVDPPAASSASATPVATATPKPMTLADLILPTIE-------TGIVEDIPNTKMRKIIAQRLTESKREVPHFYTTHEVELDAIMKLRKKLANDHEMKISVNDFVLKCSAMALRDVPRVNAQY--KSDTVTYLDSIDISVAVATPTGLITPILFGADKLGLAQVTSAVLDLATRARDGKLAPQEYQGGSFSVSNLGMFGIREFSAVINPPQAAILAVGGGAK-----QFVVRRGPEGEKLPPGVAMRMTACLSADRRVVDEATAGLFMAAFREYMNKPELLLL 472          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: XP_009822582.1 (pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci] >ETV87719.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci])

HSP 1 Score: 319.3 bits (817), Expect = 2.300e-83
Identity = 212/482 (43.98%), Postives = 270/482 (56.02%), Query Frame = 0
Query:   77 RRGFAAVPE-FTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            R  F+++PE  T ++MP+LSPTM  GTI+ W KK G++  AGDVLC++ETDKAVV Y++QD+ VLAKIL    G  + VG  +A +V+D+  YQA V +    ++    +   P                              LG  +L PA  H +                                 V A P                        XXXXXXXXXXXX P V      A  G F D   SNMRKIIA+RL  SK TVPH Y ++DCEID ++T R RL+K++ V+VS+ND ++++ A ALRDVPEAN  WD    + V N  VDISVAVAT +GLITPI+       LT I++T K+L  RAR  KLKPEEFQGGSFT+SNLG FG+D F+AVINPPQA IMAVGRG       E V+  D  +L P   T++  T+S DRRV+D+ +A QFLQAFK YM  P+L+LL
Sbjct:   22 RAPFSSLPEGVTRLVMPALSPTMESGTIAAWLKKEGEVASAGDVLCQVETDKAVVDYEMQDDAVLAKILVQ-PGTAVDVGTLLAFTVDDEETYQALVSSGDLNKLTTDAI-VAPSAPTTEAAAPVTAAPAADHADTHRVPRIHFLGKRSLLPADHHAV--------------------------------AVKAAP--------------------AQAPXXXXXXXXXXXXAPAV------ASDGDFTDLPLSNMRKIIAKRLTASKVTVPHAYASIDCEIDAIMTLRARLKKQHGVAVSLNDFLLKAVASALRDVPEANCGWDAATHSIVPNASVDISVAVATDSGLITPIVPKVQALGLTSINSTFKELVARARANKLKPEEFQGGSFTVSNLGGFGVDNFTAVINPPQACIMAVGRG-----RAELVVPTD-ETLPPRKVTLLNVTISSDRRVVDDVIAGQFLQAFKKYMEEPDLMLL 437          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: XP_008861588.1 (pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces invadans] >ETW10177.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces invadans])

HSP 1 Score: 315.1 bits (806), Expect = 4.400e-82
Identity = 197/490 (40.20%), Postives = 263/490 (53.67%), Query Frame = 0
Query:   77 RRGFAAVPE-FTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMP--------GTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            R  F+++PE  T ++MP+LSPTM  GTI+ W KK G++  AGD+LC++ETDKAVV Y++QD+ VLAKI+    G  + VG  +A +V+D+  Y A   +    ++       T                                   A +P+  H    +       ++  GK   L   +   ++      A                                      +    +S   A+P        G F D   SNMRKIIA+RL  SK TVPH Y ++DCEID+++  R RL+K++ V+VS+ND ++++ A ALRDVPEAN  WD    T V N  VDISVAVAT TGLITPI+       LT I++T K+L  RAR  KLKPEEFQGGSFT+SNLG FGID F+AVINPPQA IMAVGRG       EFV+  D  +L P   T++  T+S DRRV+D+ +A QFLQAFK YM  P+L+LL
Sbjct:   22 RAPFSSLPEGVTRLVMPALSPTMESGTIAAWLKKEGELATAGDILCQVETDKAVVDYEMQDDAVLAKIIVQ-PGTSVDVGTLLAFTVDDEETYSALAASGDLAKLTADSAVAT----------------------SSSSNPAVEASPAAAAPSTAHAPGHR----VPRIQFLGKRALLHASNHADSVKAAVAQAA-----------------------------------APVXXTVVSSTQAVPAATAVPSDGDFIDLPLSNMRKIIAKRLTASKVTVPHAYASIDCEIDSIMKLRARLKKQHGVAVSLNDFLLKAVASALRDVPEANCGWDAATNTIVPNSSVDISVAVATDTGLITPIVPKVQALGLTSINSTFKELVARARANKLKPEEFQGGSFTVSNLGGFGIDNFTAVINPPQACIMAVGRG-----RAEFVVPDD-ETLPPRKVTLLNVTVSSDRRVVDDVIAGQFLQAFKKYMEEPDLMLL 443          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: XP_008618789.1 (pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Saprolegnia diclina VS20] >EQC27859.1 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [Saprolegnia diclina VS20])

HSP 1 Score: 310.8 bits (795), Expect = 8.300e-81
Identity = 233/482 (48.34%), Postives = 283/482 (58.71%), Query Frame = 0
Query:   78 RGFAAVPE-FTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAH-LGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            R  +++P+  T ++MP+LSPTM  GTI+ W KK G++  AGDVLC++ETDKA V Y++QDE VLAKIL  A+G  + VG  +A +V+D+  Y A +   K+G+I         XXXXXXXXXXXXXXXXXXXXXXX      H LG  +L PAA    HS+                 TK   I            XXXX                                          A  G F D   SNMRKIIA+RL  SK TVPH Y ++DCEID ++  RKRL+ ++ V+VS+ND +++S A ALRDVPEAN   D      V N  VDISVAVAT TGLITPI+       L  I+ T K+L GRAR  KLKPEEFQGGSFTISNLG FGID F+AVINPPQA IMAVGRG   + AP  V G+      P  AT+M  TLS DRRV+D+ +A QFLQAFK YM +P+LLLL
Sbjct:   20 RRLSSLPDGVTKLLMPALSPTMESGTIAAWLKKEGEMANAGDVLCQVETDKATVDYEMQDEAVLAKILV-AQGTSVDVGTLLAYTVDDEETYAALL---KSGDIAKLTGDAAAXXXXXXXXXXXXXXXXXXXXXXXHRVPRIHFLGKRSLLPAA----HSE-----------------TKPAPIXXXXXXXXXXXXXXXXP-----------------------------------------AADGPFTDLPLSNMRKIIAKRLTASKVTVPHNYASIDCEIDAIMKLRKRLKNDHGVAVSLNDFLLKSVACALRDVPEANCGMDPVLKQIVPNSSVDISVAVATDTGLITPIVPKVQNLGLVGINGTFKELVGRARANKLKPEEFQGGSFTISNLGGFGIDSFTAVINPPQACIMAVGRGRVELVAPAAVDGE------PRKATLMNVTLSSDRRVVDDVIAGQFLQAFKKYMEQPDLLLL 429          
BLAST of NO13G01210 vs. NCBI_GenBank
Match: XP_012198111.1 (hypothetical protein SPRG_19552 [Saprolegnia parasitica CBS 223.65] >KDO31493.1 hypothetical protein SPRG_19552 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 310.1 bits (793), Expect = 1.400e-80
Identity = 245/482 (50.83%), Postives = 294/482 (61.00%), Query Frame = 0
Query:   78 RGFAAVPE-FTTIMMPSLSPTMTHGTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGREIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAH-LGDFALSPAARHLIHSQHLTLSTDVRGTGKGGRLTKGDVIRAISNGQVTATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVYETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWDGKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGRARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRVRAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMSRPELLLL 558
            R  +++P+  T ++MP+LSPTM  GTI+ W KK G++  AGDVLC++ETDKA V Y++QDE VLAKIL  A+G  + VG  +A +VED+  Y A +   K+G+I        P XXXXXXXXXXXXXXXXXXXXXXX     H LG  +L P A                                    +    P XXXXXXXXXXXXXXXXXXXX                         A  G F D   SNMRKIIA+RL  SK TVPH Y ++DCEID ++  RKRL+ ++ V+VS+ND +++S A ALRDVPEAN   D      V N  VDISVAVAT TGLITPI+       L  I+ T K+L GRAR  KLKPEEFQGGSFTISNLG FGID F+AVINPPQA IMAVGRG   + AP    G+      P  AT+M  TLS DRRV+D+ +A QFLQAFK YM +P+LLLL
Sbjct:   20 RRLSSLPDGVTKLLMPALSPTMESGTIAAWLKKEGEMANAGDVLCQVETDKATVDYEMQDEAVLAKILV-AQGTSVDVGTLLAFTVEDEETYAALL---KSGDIAKLTGDAAPAXXXXXXXXXXXXXXXXXXXXXXXRVPRIHFLGKRSLLPTAHF----------------------------------ETKPAPIXXXXXXXXXXXXXXXXXXXXP------------------------AADGPFTDLPLSNMRKIIAKRLTASKVTVPHNYASIDCEIDAIMKLRKRLKNDHGVAVSLNDFLLKSVACALRDVPEANCGMDPVLKQIVPNSSVDISVAVATDTGLITPIVPKVQNLGLVGINGTFKELVGRARANKLKPEEFQGGSFTISNLGGFGIDSFTAVINPPQACIMAVGRGRVELVAPAAADGE------PRKATLMNVTLSSDRRVVDDVIAGQFLQAFKKYMEQPDLLLL 433          
The following BLAST results are available for this feature:
BLAST of NO13G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21801.14.600e-18071.45pyruvate dehydrogenase component x [Nannochloropsi... [more]
CBJ29861.12.400e-9649.29Dihydrolipoamide S-acetyltransferase [Ectocarpus s... [more]
XP_002181796.19.200e-9649.37dihydrolipoamide acetyl transferase, partial [Phae... [more]
OEU21088.11.900e-8845.612-oxoacid_dh-domain-containing protein [Fragilario... [more]
GAX25490.11.700e-8646.14pyruvate dehydrogenase E2 component [Fistulifera s... [more]
GAX20184.12.800e-8441.75pyruvate dehydrogenase E2 component [Fistulifera s... [more]
XP_009822582.12.300e-8343.98pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
XP_008861588.14.400e-8240.20pyruvate dehydrogenase complex dihydrolipoamide ac... [more]
XP_008618789.18.300e-8148.34pyruvate dehydrogenase E2 component (dihydrolipoam... [more]
XP_012198111.11.400e-8050.83hypothetical protein SPRG_19552 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001775NSK001775Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01210.1NO13G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530922gene_6889Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100065g5gene8644Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01210.1NO13G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01210 ID=NO13G01210|Name=NO13G01210|organism=Nannochloropsis oceanica|type=gene|length=1674bp
ATGATGCGCCGGGGTCTTCTCGCCTCCTCCCGTCATCACGCGTTAGGCCG
GGCCACCAACCCTGCACATGCCACACTCAAAAGTGGCAGCGGCAGCAGGA
GAGGGCTTTTCAGCATCTTGACGAAGCCCTTGACGGCCGAGGTAGTCGGC
AGCATAAGCAGGAGCAGCAGTGGAAGTATGGGCATAACCGGCTTTCATCT
CTCCCGCCCGACCTCTCTCCAGCCCACCCGCCGTGGCTTTGCGGCCGTGC
CGGAGTTCACCACCATTATGATGCCCTCCTTGTCCCCCACCATGACCCAT
GGGACCATAAGTGAATGGACTAAGAAGCCCGGGGACATTTGCGGGGCGGG
GGATGTGCTGTGCGAGATCGAGACTGACAAGGCCGTGGTGTCTTACGATG
TCCAAGATGAATTTGTCCTTGCCAAAATTCTCGAAGACGCCAAGGGCCGC
GAAATCAAGGTCGGTGAACCCGTTGCTATCTCCGTGGAAGATCAAGCAGC
TTATCAAGCCTTCGTCGAGGCCGACAAAGCAGGGGAAATCGAAATGCCCA
TGCTCCCTTTTACTCCAGCACCGGGAACGGCACCAGCACCATCAGCTGTG
GCCTCCTCCTCTCCTTCCCCTCCTCCTCCTCCTTCGTCCCCATCACCTAC
TGCCCACCTGGGCGACTTCGCCCTTTCTCCCGCTGCCCGCCACCTCATCC
ACTCCCAACACCTCACCCTCTCAACCGATGTGCGCGGCACGGGAAAAGGC
GGTCGACTCACAAAAGGAGATGTGATTCGTGCCATTTCCAACGGACAAGT
AACTGCCACCCCTCCCTCTCCACCCGCGCCTTCGGCATTCTCCGCAAAAG
CAGCGCCCGCAGTGGCAGCGACAGCACCAGTAGCATCAGCAGCACCAGCA
GCAACAATAGCACCAGCAGCTCTCCCCCCTGTGCACATCTCTGAAATCCA
CGCGATGCCTGGTACCTTTGCCGACAGCAAAAACTCTAACATGCGCAAGA
TTATCGCGCGGCGCCTGGCCGAGAGCAAGGCTACTGTGCCCCATGTCTAT
GAGACGGTTGATTGCGAGATTGACACCGTACTGACCTTCCGCAAGCGCTT
GCAGAAAGAGTATGAAGTAAGTGTGTCTGTTAATGACGTGATTATCCGCT
CAGCTGCCTTGGCACTCCGGGACGTGCCCGAAGCTAATGCCTTCTGGGAC
GGGAAACAAGGAACGGCAGTGCTGAATAAAGGAGTGGATATCTCTGTGGC
GGTCGCGACCCCCACGGGGCTCATCACTCCGATCATCACCATGTCGGACC
GACGAAGACTGACGGAGATAAGTGCGACTATGAAGGACTTGGCGGGAAGG
GCTAGACAAGGGAAGCTTAAGCCGGAGGAGTTTCAGGGAGGGTCTTTCAC
GATTTCGAACTTAGGGATGTTTGGGATTGATGAGTTTTCGGCAGTGATTA
ACCCGCCACAGGCCGCCATTATGGCGGTGGGGCGGGGGGCGAAGAGGGTG
AGGGCGCCTGAGTTTGTGATGGGGCAGGATGTAGGGAGTTTGAAGCCGTA
TAGTGCGACGGTGATGACGGCTACCTTATCGTTTGATCGGAGGGTGTTGG
ATGAAGCGTTGGCAGCGCAATTTTTGCAGGCATTTAAGAGTTATATGTCT
AGGCCGGAATTGCTCTTGCTGTAG
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protein sequence of NO13G01210.1

>NO13G01210.1-protein ID=NO13G01210.1-protein|Name=NO13G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bp
MMRRGLLASSRHHALGRATNPAHATLKSGSGSRRGLFSILTKPLTAEVVG
SISRSSSGSMGITGFHLSRPTSLQPTRRGFAAVPEFTTIMMPSLSPTMTH
GTISEWTKKPGDICGAGDVLCEIETDKAVVSYDVQDEFVLAKILEDAKGR
EIKVGEPVAISVEDQAAYQAFVEADKAGEIEMPMLPFTPAPGTAPAPSAV
ASSSPSPPPPPSSPSPTAHLGDFALSPAARHLIHSQHLTLSTDVRGTGKG
GRLTKGDVIRAISNGQVTATPPSPPAPSAFSAKAAPAVAATAPVASAAPA
ATIAPAALPPVHISEIHAMPGTFADSKNSNMRKIIARRLAESKATVPHVY
ETVDCEIDTVLTFRKRLQKEYEVSVSVNDVIIRSAALALRDVPEANAFWD
GKQGTAVLNKGVDISVAVATPTGLITPIITMSDRRRLTEISATMKDLAGR
ARQGKLKPEEFQGGSFTISNLGMFGIDEFSAVINPPQAAIMAVGRGAKRV
RAPEFVMGQDVGSLKPYSATVMTATLSFDRRVLDEALAAQFLQAFKSYMS
RPELLLL*
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Synonyms
Publications