NO13G00940, NO13G00940 (gene) Nannochloropsis oceanica

Overview
NameNO13G00940
Unique NameNO13G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4191
Alignment locationchr13:300219..304409 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:300219..304409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010721DUF1295
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO13G00940 vs. NCBI_GenBank
Match: EWM21765.1 (Protein of unknown function DUF1295 [Nannochloropsis gaditana])

HSP 1 Score: 444.5 bits (1142), Expect = 4.300e-121
Identity = 220/396 (55.56%), Postives = 258/396 (65.15%), Query Frame = 0
Query:   91 MVCWYHFHPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWP 487
            MVCWY+F PHLTWHL A+ +D      ETL RPD  Y++SSDPF  +L + LWF  LTG  G +TQEFSWVDRIWS+ PP YAWLFALHP++AL   WP+++      RPFLLA L +LWG+RLTYNFWRKGGYAGGGEDYRW E+RTWFS  TLQ+FN+ FIA FQN+LL LL+ PA+ AWVGRT+  LT VD  L  LFLL L  ETVADQQQW FQ++K                                                              S P   L+  +IADGF QSGLFA  RHPNF AE++LWWVFH+F YP+AGIH ER+HDW N   WPF+ NWT +GP+LLTLLFQGST LTE+LS RKYP+YR+YQ RV RL P
Sbjct:    1 MVCWYNFSPHLTWHLNALVNDIKTRPLETLLRPDKAYVQSSDPFAPILVLCLWFIALTGLLGAVTQEFSWVDRIWSVAPPLYAWLFALHPYIALDTVWPTTV-SECMTRPFLLAGLASLWGLRLTYNFWRKGGYAGGGEDYRWEEIRTWFSFSTLQLFNVVFIAFFQNILLFLLIAPAYLAWVGRTYHALTLVDVVLASLFLLLLLVETVADQQQWVFQRQK-----------------------------YQALFQRPSRKRRASLRATTAESPARPPKNPDTSIP---LVTGDIADGFLQSGLFAFSRHPNFWAEMSLWWVFHLFAYPAAGIHLERRHDWNNFARWPFWANWTAVGPLLLTLLFQGSTSLTEELSARKYPQYRRYQKRVSRLLP 363          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: OZJ05780.1 (hypothetical protein BZG36_01290 [Bifiguratus adelaidae])

HSP 1 Score: 204.5 bits (519), Expect = 7.500e-49
Identity = 132/365 (36.16%), Postives = 175/365 (47.95%), Query Frame = 0
Query:  125 LVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWV-GRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGF-CQSGLFARCRHPNFSAEIALWWVFHIF-VYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWP 487
            + + +SSDPF+  L    + +F T F   +T  +S VDRIWSL PPFY+W F LH  +   +  P+        R  L++ L TLWG RLT+NFWRKGGY    EDYRW  +R        Q+ N  FIA +QN+LL L+ +P + A++  R    L  VD   T+LFL  LA E +AD QQW FQ  K                                                               +P    L  +   GF   SGL+   RHPNF  EI+ WWV ++F V  +AG  +     W         +NWTI+G V+LT+LFQGST+LTE ++  KYP Y+QYQ  VPR+ P
Sbjct:   43 VAFYRSSDPFIIGLACVAFLSFTTWFMSILTGNYSQVDRIWSLLPPFYSWHFTLHDCMNSRDGQPNV-------RLVLVSTLMTLWGARLTFNFWRKGGYKWKEEDYRWPYLRQAIGPVAFQLLNATFIAPYQNILLYLISLPVYIAYLNSRISFELNAVDLVATVLFLALLAGEFIADHQQWVFQSEK--------------------------------------------------------ARLIKEKAP----LKGDYKRGFLASSGLWKYSRHPNFFCEISTWWVVYLFSVAATAGDKWGLTGAW---------LNWTILGAVMLTMLFQGSTELTEYMTGSKYPAYKQYQEHVPRITP 331          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: WP_033209086.1 (DUF1295 domain-containing protein [Gryllotalpicola ginsengisoli])

HSP 1 Score: 203.8 bits (517), Expect = 1.300e-48
Identity = 129/344 (37.50%), Postives = 167/344 (48.55%), Query Frame = 0
Query:  138 LFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRV 482
            L I +    LT     +T+E+SWVDRIWS+ P  Y W+FA    L L +A           R   +A L TLWG RLT+NF RKGGYA GGEDYRWA +R     +   +FN+FFI I+QNVLLLL+ +PA++AW  R   PL  +D  L ++FL CL  ETVAD+QQW FQQRK+A                                                                     +E    F Q+GLF   RHPN+  E A WWV  +    +AG            + W     WT++GP+LLTLLF GST  TE++S+ +YP Y +Y+ RV
Sbjct:   11 LLILVGVCALTWGLSLVTREYSWVDRIWSIVPVVYVWVFA--AALGLRDA-----------RLDAMAVLVTLWGARLTFNFARKGGYARGGEDYRWAVLRQRMPGWAFAVFNLFFITIYQNVLLLLIALPAYTAW--RHPSPLNALDVLLIVVFLACLVGETVADEQQWRFQQRKKAELEAG----------------------------------------------------------------REPEARFVQTGLFRYSRHPNYFFEQAQWWVLFLIGCVAAG------------SLW----QWTVLGPLLLTLLFVGSTRFTEQISLARYPEYAEYRRRV 259          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: XP_008909745.1 (hypothetical protein PPTG_14578 [Phytophthora parasitica INRA-310] >ETK80525.1 hypothetical protein L915_13820 [Phytophthora parasitica] >ETL87223.1 hypothetical protein L917_13522 [Phytophthora parasitica] >ETN04808.1 hypothetical protein PPTG_14578 [Phytophthora parasitica INRA-310] >ETO59562.1 hypothetical protein F444_22128 [Phytophthora parasitica P1976] >ETP00639.1 hypothetical protein F441_22006 [Phytophthora parasitica CJ01A1] >KUF64980.1 hypothetical protein AM587_10010691 [Phytophthora nicotianae])

HSP 1 Score: 202.2 bits (513), Expect = 3.700e-48
Identity = 135/391 (34.53%), Postives = 182/391 (46.55%), Query Frame = 0
Query:   98 HPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLL 489
            +P  TWH +A+ H  +   +    +P+L+   +S+     L + L    LT     +T+ +S+ DR+WS+TPP +AW FA H +L     W          R  L+A LTTLWG RLT+NFWRKGGY    EDYRWA VR +      ++ N+ FIA +Q++LLLLL +P++  +  R  + L  VD   T+LFLL L  ETVADQQQW F   K                                                                 L + L  +   GF +SGLF   RHPNF  E++LWW F+IF    +   F                N + +G +LLTLLFQGS   TE ++  KYP Y+ YQ RVP L P L
Sbjct:    5 YPFTTWH-DALLH--AQEAWTEALQPNLLPYAASNALAVALQLLLVLIALTWLASVVTRNYSFTDRLWSITPPMFAWHFAFHAYLRDDGVWDQ--------RLLLMAVLTTLWGCRLTFNFWRKGGYKLSEEDYRWAVVRQYMHWTLFEVLNLTFIAGYQHLLLLLLTVPSYVVYFHR-HEELNEVDVVATVLFLLFLVLETVADQQQWNFYSMKYKLI------------------------------------------------------------ALKKPLTGDYKAGFNRSGLFRYSRHPNFFGEMSLWWAFYIFSVAVSKQTF----------------NSSSLGTILLTLLFQGSAPFTEYVTASKYPLYKLYQSRVPMLIPWL 307          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: ETI40423.1 (hypothetical protein F443_14177 [Phytophthora parasitica P1569])

HSP 1 Score: 201.4 bits (511), Expect = 6.400e-48
Identity = 137/391 (35.04%), Postives = 184/391 (47.06%), Query Frame = 0
Query:   98 HPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLL 489
            +P  TWH +A+  D  + + E L +P+L+   +S+     L + L    LT     +T+ +S+ DR+WS+TPP +AW FA H +L     W          R  L+A LTTLWG RLT+NFWRKGGY    EDYRWA VR +      ++ N+ FIA +Q++LLLLL +P++  +  R  + L  VD   T+LFLL L  ETVADQQQW F   K                                                                 L + L  +   GF +SGLF   RHPNF  E++LWW F+IF    +   F                N + +G +LLTLLFQGS   TE ++  KYP Y+ YQ RVP L P L
Sbjct:    5 YPFTTWH-DALL-DAQEAWTEAL-QPNLLPYAASNALAVALQLLLVLIALTWLASVVTRNYSFTDRLWSITPPMFAWHFAFHAYLRDDGVWDQ--------RLLLMAVLTTLWGCRLTFNFWRKGGYKLSEEDYRWAVVRQYMHWTLFEVLNLTFIAGYQHLLLLLLTVPSYVVYFHR-HEELNEVDVVATVLFLLFLVLETVADQQQWNFYSMKYKLI------------------------------------------------------------ALKKPLTGDYKAGFNRSGLFRYSRHPNFFGEMSLWWAFYIFSVAVSKQTF----------------NSSSLGTILLTLLFQGSAPFTEYVTASKYPLYKLYQSRVPMLIPWL 307          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: ETM40410.1 (hypothetical protein L914_13630 [Phytophthora parasitica])

HSP 1 Score: 201.1 bits (510), Expect = 8.300e-48
Identity = 134/391 (34.27%), Postives = 182/391 (46.55%), Query Frame = 0
Query:   98 HPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLL 489
            +P  TWH +A+ H  +   +    +P+L+   +S+     L + L    LT     +T+ +S+ DR+WS+TPP +AW FA H +L     W          R  L+A LTTLWG RLT+NFWRKGGY    EDYRWA VR +      ++ N+ FIA +Q++LLLLL +P++  +  R  + L  VD   T+LF+L L  ETVADQQQW F   K                                                                 L + L  +   GF +SGLF   RHPNF  E++LWW F+IF    +   F                N + +G +LLTLLFQGS   TE ++  KYP Y+ YQ RVP L P L
Sbjct:    5 YPFTTWH-DALLH--AQEAWTEALQPNLLPYAASNALAVALQLLLVLIALTWLASVVTRNYSFTDRLWSITPPMFAWHFAFHAYLRDDGVWDQ--------RLLLMAVLTTLWGCRLTFNFWRKGGYKLSEEDYRWAVVRQYMHWTLFEVLNLTFIAGYQHLLLLLLTVPSYVVYFHR-HEELNEVDVVATVLFVLFLVLETVADQQQWNFYSMKYKLI------------------------------------------------------------ALKKPLTGDYKAGFNRSGLFRYSRHPNFFGEMSLWWAFYIFSVAVSKQTF----------------NSSSLGTILLTLLFQGSAPFTEYVTASKYPLYKLYQSRVPMLIPWL 307          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: WP_089909967.1 (DUF1295 domain-containing protein [Leifsonia sp. 21MFCrub1.1] >SEA72276.1 Steroid 5-alpha reductase family enzyme [Leifsonia sp. 21MFCrub1.1])

HSP 1 Score: 201.1 bits (510), Expect = 8.300e-48
Identity = 129/363 (35.54%), Postives = 166/363 (45.73%), Query Frame = 0
Query:  132 DPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLLGDVGKE 495
            DPF+  L+I       T     IT+E+SWVDRIWS+ P  Y W+FA                G    R  L+A L TLWG RLT+NF RKGGYA GGEDYRW  +R   S    Q+FN+ FI ++QN+LLLL+ +PA +A+  RT  PL  +D  L  +FL  L  ET+ADQQQW F + K+                                                                L     +E +  F QSGLF   RHPNF  E A WWV  +F   +AG                 ++ WT++GP+LLT LF GST  TE +S+ +YP Y  YQ R   + P L   G +
Sbjct:    4 DPFIVSLWILAAACAATWVLSLITREYSWVDRIWSIVPVVYVWVFA-------------GAAGLADARLDLMAVLVTLWGARLTFNFARKGGYAPGGEDYRWVVLRGRMSPSAFQLFNLLFIVVYQNILLLLIALPAWTAYQHRT--PLNALDVILAAVFLFLLTGETIADQQQWNFHRWKK----------------------------------------------------------------LEVAAGREPSPRFLQSGLFRFSRHPNFFFEQAQWWVLFLFGCVAAG----------------SFLQWTVLGPLLLTALFIGSTVFTESISLSRYPEYAAYQARTSPVIPWLPGRGAD 271          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: ETL33949.1 (hypothetical protein L916_13716 [Phytophthora parasitica])

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-47
Identity = 135/391 (34.53%), Postives = 181/391 (46.29%), Query Frame = 0
Query:   98 HPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLL 489
            +P  TWH +A+ H  +   +    +P+L    +S+     L + L    LT     +T+ +S+ DR+WS+TPP +AW FA H +L     W          R  L+A LTTLWG RLT+NFWRKGGY    EDYRWA VR +      ++ N+ FIA +Q++LLLLL +P++  +  R  + L  VD   T+LFLL L  ETVADQQQW F   K                                                                 L + L  +   GF +SGLF   RHPNF  E++LWW F+IF    +   F                N + +G +LLTLLFQGS   TE ++  KYP Y+ YQ RVP L P L
Sbjct:    5 YPFTTWH-DALLH--AQEAWTEALQPNLRPYAASNALAVALQLLLVLIALTWLASVVTRNYSFTDRLWSITPPMFAWHFAFHAYLRDDGVWDQ--------RLLLMAVLTTLWGCRLTFNFWRKGGYKLSEEDYRWAVVRQYMHWTLFEVLNLTFIAGYQHLLLLLLTVPSYVVYFHR-HEELNEVDVVATVLFLLFLVLETVADQQQWNFYSMKYKLI------------------------------------------------------------ALKKPLTGDYKAGFNRSGLFRYSRHPNFFGEMSLWWAFYIFSVAVSKQTF----------------NSSSLGTILLTLLFQGSAPFTEYVTASKYPLYKLYQSRVPMLIPWL 307          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: ETP38340.1 (hypothetical protein F442_14019 [Phytophthora parasitica P10297])

HSP 1 Score: 200.3 bits (508), Expect = 1.400e-47
Identity = 134/391 (34.27%), Postives = 181/391 (46.29%), Query Frame = 0
Query:   98 HPHLTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADGFCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLL 489
            +P  TWH +A+ H  +   +    +P+L+   +S+     L + L    LT     +T+ +S+ DR+WS+ PP +AW FA H +L     W          R  L+A LTTLWG RLT+NFWRKGGY    EDYRWA VR +      ++ N+ FIA +Q++LLLLL +P++  +  R  + L  VD   T+LFLL L  ETVADQQQW F   K                                                                 L + L  +   GF +SGLF   RHPNF  E++LWW F+IF    +   F                N + +G +LLTLLFQGS   TE ++  KYP Y+ YQ RVP L P L
Sbjct:    5 YPFTTWH-DALLH--AQEAWTEALQPNLLPYAASNALAVALQLLLVLIALTWLASVVTRNYSFTDRLWSIAPPMFAWHFAFHAYLRDDGVWDQ--------RLLLMAVLTTLWGCRLTFNFWRKGGYKLSEEDYRWAVVRQYMHWTLFEVLNLTFIAGYQHLLLLLLTVPSYVVYFHR-HEELNEVDVVATVLFLLFLVLETVADQQQWNFYSMKYKLI------------------------------------------------------------ALKKPLTGDYKAGFNRSGLFRYSRHPNFFGEMSLWWAFYIFSVAVSKQTF----------------NSSSLGTILLTLLFQGSAPFTEYVTASKYPLYKLYQSRVPMLIPWL 307          
BLAST of NO13G00940 vs. NCBI_GenBank
Match: KQR54982.1 (hypothetical protein ASF88_06130 [Leifsonia sp. Leaf336])

HSP 1 Score: 199.9 bits (507), Expect = 1.900e-47
Identity = 135/371 (36.39%), Postives = 167/371 (45.01%), Query Frame = 0
Query:  132 DPFVSLLFISLWFAFLTGFTGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRPFLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNIFFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETVADQQQWEFQQRKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLHRLLPKEIADG------FCQSGLFARCRHPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPVLLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLLGDVGKEAV 497
            +PF+  L+I +     T     +T E SWVDRIWS+ P  Y W+FA                G    R  L+A + TLWG RLT+NF RKGGYA GGEDYRW  +R   S     +FN+FFI I+QNVLLLL+ +PA +A+  RT  PL  +D    +LFLL LA ET+ADQQQW+F Q K+                                                                      +E A G      F QSGLF   RHPNF  E A WWV  +F   +AG                  + WT+IGP+LLT LF GST  TE +S  +YP Y  YQ R   + P     G EAV
Sbjct:    2 EPFIVCLWILVGVCAATWVLSLVTGEHSWVDRIWSIVPVVYVWVFA-------------GAAGLQDARLDLMAGIVTLWGARLTFNFARKGGYAPGGEDYRWEVLRDRMSRGAFALFNLFFIVIYQNVLLLLITLPAWTAYQHRT--PLNALDIVCIVLFLLFLAGETIADQQQWDFHQWKK----------------------------------------------------------------------REAAAGRTPSPRFLQSGLFRFSRHPNFFFEQAQWWVVFLFGCAAAG----------------SILQWTVIGPLLLTGLFIGSTVFTESISRSRYPEYADYQRRTSPVVPWFPRRGDEAV 271          
The following BLAST results are available for this feature:
BLAST of NO13G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21765.14.300e-12155.56Protein of unknown function DUF1295 [Nannochlorops... [more]
OZJ05780.17.500e-4936.16hypothetical protein BZG36_01290 [Bifiguratus adel... [more]
WP_033209086.11.300e-4837.50DUF1295 domain-containing protein [Gryllotalpicola... [more]
XP_008909745.13.700e-4834.53hypothetical protein PPTG_14578 [Phytophthora para... [more]
ETI40423.16.400e-4835.04hypothetical protein F443_14177 [Phytophthora para... [more]
ETM40410.18.300e-4834.27hypothetical protein L914_13630 [Phytophthora para... [more]
WP_089909967.18.300e-4835.54DUF1295 domain-containing protein [Leifsonia sp. 2... [more]
ETL33949.11.100e-4734.53hypothetical protein L916_13716 [Phytophthora para... [more]
ETP38340.11.400e-4734.27hypothetical protein F442_14019 [Phytophthora para... [more]
KQR54982.11.900e-4736.39hypothetical protein ASF88_06130 [Leifsonia sp. Le... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001801NSK001801Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00940.1NO13G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596772gene_6916Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100298g1gene8668Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00940.1NO13G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00940 ID=NO13G00940|Name=NO13G00940|organism=Nannochloropsis oceanica|type=gene|length=4191bp
ATCAGTTTTCAGTCTGACTTCTCCGCATGAGTAAAGTCACGTCTGCATTA
TTATGCGCGCACACATGCCCGTTCATATACGTATGAGGGGCCCTGGTTCA
CATGTGCATCTAAGTCGCGTTGCTTCTGTTATCAAAACCAAAGCTTTCAG
AGTCTTGTACCTCGAGCTTGCTTCTTCAGCCAAGGGCAAGGCTCGCCCGG
CAAGGAATCACATCATACTATACCATAAAGCGGTGGGTACCCAACCGACA
CCCAACGCAAGTCTCTCTGGCTTTAGACTCTGTGCGCAGCGTGATCTATC
CAGATTAGATCCATTACAGCTCGCGCGCCTGTCCTAGAGATGTCATCGAC
GGCAGCGGGGCCCTCTCCTGTGTTTTGGTACCAATGCAGGTTTTTATGAC
GGGAGACGTTTCTGCTCCACTCTGCCTCACACTTGCCCCATGTGGCGATG
ATTACAACGCACTGCCTTGCAATAAATGGCGCATTTTTAAGGAGCAGACT
AATTTTCAGACTTGTCTTGCAGCGGTCCTGTCATTTGATCCGTTTGTCAC
GCACGCACATGTACTCACTCCCCTCCCTCTCCTTCCACCTGCCCTCGTGG
ACACACGAAAGCACACAGACCTTGCCCCACTCACCGCCATCACCCTCGTG
ACGATGGTTTGCTGGTACCACTTCCACCCCCATCTCACGTGGCATTTGGA
AGCCATCACTCATGACTTCAGCGACAACTTTTTCGAGACTCTCTTCCGTC
CCGACCTTGTCTACCTCAAGTCTTCAGATCCTTTCGTCTCCCTCCTCTTC
ATCTCCCTCTGGTTCGCCTTCCTCACCGGTTTCACGGGATGGATCACGCA
AGAATTCTCCTGGGTTGATCGCATCTGGTCGTTAACCCCTCCGTTCTACG
CGTGGCTCTTCGCCCTACACCCCTTCCTTGCCCTTGGGGAAGCCTGGCCA
TCTTCGATCGGGGGCTACTTTTTTGGACGTCCTTTTCTGCTGGCGTGGCT
CACCACCTTATGGGGCGTGAGGTTGACGTACAACTTTTGGAGGAAGGGGG
GCTATGCGGGGGGAGGAGAGGATTATCGATGGGCTGAAGTGCGGACGTGG
TTCTCGCACTTCACGTTGCAGATGTTCAATATTTTTTTCATTGCCATATT
TCAGgtacgtttatcattttttcactccctttttcccgcttctttcgtgc
cttttcgttttccttctttactttgtccttgaccgctttcctctccccta
ctcacccctccttcatgcccccccgccctccctcccatttcccttcctgt
agAACGTCCTCCTCCTCCTTCTAGTCATGCCGGCACATTCCGCCTGGGTG
GGCCGCACCTGGCAACCCCTAACCTGCGTCGACGCTTTCCTCACCATCTT
ATTCCTACTCTGCCTCGCCGCTGAAACAGTCGCCGACCAGCAGCAATGGG
AGTTCCAGCAACGCAAGCGCGCCGCCCTTGCCGCCGCTGCTCCTGCTGCT
CCTGCTGCCCCTGCTGCTCCTGCTGCTCCTGCTGCTCCCATCGCTGCGGC
TACTGCCTCTGGCACCACCACTCCTGCAGGGAGCCCCAGTCGCAAAAACA
GAAACAGAAACAAAAACAAGAACACCAACCAGAACCACAACCACCACAAC
CCCTCCTCCCCTCTCCATCGTCTCCTTCCCAAAGAAATCGCCGATGGTTT
CTGCCAGTCCGGCCTTTTTGCCCGCTGCCGCCACCCTAATTTCTCCGCTG
AGATAGCCTTATGGTGGGTCTTTCACATCTTCGTTTACCCCTCCGCGGGG
ATCCACTTCGAAAGGAAGCACGATTGGGTCAATCACACCTACTGGCCGTT
TTATATTAATTGGACGATTATCGGGCCGGTGTTGCTGACGTTGCTCTTCC
AGGGCTCGACCGATCTGACTGAGAAGCTGAGTGTGAGGAAGTATCCGAGA
TACAGGCAGTATCAGATGAGGGTACCGCGGTTGTGGCCTCTGCTCGGGGA
CGTGGGGAAGGAGGCAGTGAAGCACGAGTAGAGAGGAGGTAGGGAGAGAG
GGAGGGAGGGAAGGAGAAGGTTTGGGTCTGGATTTTGGCTTTTGAGCATG
CAATGGAAAAGGAAGACTTGTAAGGGATGAGAAGTAGATTGTGTATATTT
ATCGAGCAGCATCAATACTGGTTTTCATCCATGCTTTTCTGTGTGTATCA
CAACAAAAAGGGCGAGCAAATTAGAGGGAAGGAGAGCGGGATGAAAGGTA
GAAGAAAGAGCAGTCTTCCTGTCTGTGAGTGCAGTATGAAACTGCGTGTG
ATATCTGACCCAACCAAAAGGAACCGGATTTAAGCTCCCCGAAAACAAAA
GTGAGAGAATTTCGTCTATGTACGCTTGCAACAAAAACGAGCACAGGACA
AGAAATAACAAGCAAGAATAATTTTAATGAGCGCATATTTTGTTTCAAAC
AATTATCTTTTTTTCGACTTGCCTTCTGACGGAAACTCCCACAACGCTCT
CTCCACTGACACTCTTTCATGTCTTTCTGACTTCGTGCACTCACACCGAC
GCACCCTTCCTCACCCTCCCCCTCCTCCTCCTCGCTCCATCCATCCATCA
ACCTCTCCCTCCTAGACCAGCCCCAAGAAAAGACATTCGGTTGTATTAAG
TTGTCGTTGTTGCCTTCGGTGCCTACCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTCTCTAGGCCAACTCCAAGTGAATCTCCAACTCCCCCTGCA
TCCCCCCTTCCTCCCCATCATCCCCCCCGGCTCCTTCTTCCGCCAGCTCC
GCCTTATGAGGGGCCTCCAGGGGCAACGTCGTGTCCACGGGAAACGTTAA
CCCTTTTAACGGCAGTCTCACCCTCCCCAACGGTTGATCTTTCCAGCTCA
TCTTGTTCACGACCAAAACCTCCAAAACATTGTCATCGAGGGTCGGCACT
CGTAAGAATTGAGGATCATTCCTCCAATCAGGCGCGTCTTGAGGCTGGGA
GGTGTGTAAACGCGACTTGTACCACTGGCCCTCGTCCAACGCCGGTTTCC
TTTCCGCTTTGTCTTTACCTGCTCCTCCTGCTCCTCCTCCTCCTCCTCCT
CCTCTTTTTAGTCCCGCCGGCAAGATGCGAAGCTGACACAGGGTATCGAG
ACGCTCGGGTTCTGCAGGCATTTCCAGTCCCCGTGCAGCGAGCTCAATCC
GCAATGTAATTGTCGGACTCTCCCCACCACTGCTGCTGCTGCTGCTGCTA
TTGCTGCCACTGGTGGCGGTAGTGGCACTGATCCCCTCGGTCCCGACCAT
AGCCGTCACTAGCTCCCCTCCGGCCTTCTCGCCCTTTTTGCTCTTTTTGA
GATGTTGTCCTCCTTGCCCGGAGGCTTCAGCAGTCGCGGCTCGTATGGCG
ATGCCGAGGCGTGGAAGGAGAAAGGGGCGTAGGGCGGTGTAGATGATGTT
GGCGCCTTGTGTCTTCGGGTTGAAGGCCCAGAGGAGGAAGAGGGTCTTGA
AGATGTAGTAGAGGGGTAAGGAGGGAAAGATGGGGAGGTAGGTGTCGGAG
AGGTTGAGGAGGGAGTAGAGAAGGAAGTATTTAATGAAGAATTTCATGAC
CACGGGCTCAGACATCTTGATGGCTTTAAGGGAGCCCAGGAGGGGGTAGG
TGAACCCCGCGGCGAGGCTGTTGGTTGTTTGGATTATGGGTAGGCAGTAA
GTACCAAAGCATGGAGACTTAGGCAGTACTTATGAAGTAGTTCGTAGTCG
AGAAAGCAGCAGCTTCATTAAAAAAAGGGGACTGGATGTAACGAAGCGTG
ATTATGTTCCATATCCTCATAGTCTCGAGGCGCGCAGCCAGATAGATACA
GACACATAAAAATCATTCAATAGCATGCCCATTCACTTACGCGACACCTT
CCATGCTGAGAATGAGGACAAGTATTAGAACCGACAGGGAGCTCCCAATA
ATGAAGAGGGCAGGGGCAGGCACGTTGGTCTTTTTTTCAAGCTCAAGCAA
CTGAGGACGGAGGGTCAGCGCAGGATGCTTCTCCATTTTGAGATCGACCA
TTTTCAGCATATTGTCTTTGAGCAACACGAGCTTTTGCACGAGCGTTGGA
CCGTGGTCGCCGCCGGCAGTGCTGCTGCTGCTGCTGCTGCCGGCCTGGGG
CCTCGCCATGATGCTTGCTTCGAAAAGTTTTCGGGTGATCT
back to top

protein sequence of NO13G00940.1

>NO13G00940.1-protein ID=NO13G00940.1-protein|Name=NO13G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MQVFMTGDVSAPLCLTLAPCGDDYNALPCNKWRIFKEQTNFQTCLAAVLS
FDPFVTHAHVLTPLPLLPPALVDTRKHTDLAPLTAITLVTMVCWYHFHPH
LTWHLEAITHDFSDNFFETLFRPDLVYLKSSDPFVSLLFISLWFAFLTGF
TGWITQEFSWVDRIWSLTPPFYAWLFALHPFLALGEAWPSSIGGYFFGRP
FLLAWLTTLWGVRLTYNFWRKGGYAGGGEDYRWAEVRTWFSHFTLQMFNI
FFIAIFQNVLLLLLVMPAHSAWVGRTWQPLTCVDAFLTILFLLCLAAETV
ADQQQWEFQQRKRAALAAAAPAAPAAPAAPAAPAAPIAAATASGTTTPAG
SPSRKNRNRNKNKNTNQNHNHHNPSSPLHRLLPKEIADGFCQSGLFARCR
HPNFSAEIALWWVFHIFVYPSAGIHFERKHDWVNHTYWPFYINWTIIGPV
LLTLLFQGSTDLTEKLSVRKYPRYRQYQMRVPRLWPLLGDVGKEAVKHE*
back to top
Synonyms
Publications