NO13G00650, NO13G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00650 vs. NCBI_GenBank
Match: OMJ95832.1 (hypothetical protein SteCoe_732 [Stentor coeruleus]) HSP 1 Score: 75.9 bits (185), Expect = 1.200e-9 Identity = 54/173 (31.21%), Postives = 87/173 (50.29%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKFVELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALRVALT 208 G GKS+LL R+ + S T GV K I ++ +V+ + T+ + + + + A V+ +YD T+R +F+ ++ +++Y V+R LL+ K + D K+AVS+ EG LA LG+PF ETSA+T VEQ+F + RVA+T Sbjct: 19 GVGKSSLLLRFSDNTYTESFIATIGVDFKIKTIDVESKVIK-----LQIWDTAGQEKFRTITSSYYRGAHGVIVVYDVTNRETFNNVKNWMGEISRYASENVNR---LLIGNKCDC------DSKKAVSTEEGKELADSLGIPFMETSAKTSSNVEQSFFRMASEIKSRVAVT 177
BLAST of NO13G00650 vs. NCBI_GenBank
Match: OLL24965.1 (GTP-binding protein ypt2 [Neolecta irregularis DAH-3]) HSP 1 Score: 75.1 bits (183), Expect = 2.000e-9 Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKG-RVLTRILNVKFVELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVR 199 G GKS LL R+ F S T G+ + I L+G R+ +I + T+ + + + A ++ +YD+TDR SF + + V Q+ V+++ L+ K + DEKR VSS EG +LA+ LG+PF E SA+T VE AF L R Sbjct: 21 GVGKSCLLLRFSEDQFTPSFITTIGIDFKIRTIELEGKRIKLQIWD------TAGQERFRTITTAYYRGAMGILLVYDTTDRKSFDNIRTWFQNVTQHASEDVNKI---LIGNKC------DWDEKRVVSSEEGQQLANELGIPFIEASAKTNVNVEDAFFLLAR 170
BLAST of NO13G00650 vs. NCBI_GenBank
Match: ONH75356.1 (GTP-binding protein YPT53 [Saccharomyces cerevisiae]) HSP 1 Score: 74.3 bits (181), Expect = 3.400e-9 Identity = 53/181 (29.28%), Postives = 89/181 (49.17%), Query Frame = 0 Query: 17 TFPLRVFVVGAKGAHALEGPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKF-VELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSL 197 T ++V ++G GKS+++ R++S F S +PT G A TK IT G+V +KF + T+ + LAP + A A + ++D TD SF + + V + H + L+ K + N ++++E RA+ + L R + +FE SA+TGE + Q F +L Sbjct: 10 TLTIKVVLLGESAV------GKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV------IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTDEGSFYKAQN---WVEELHEKVGHNIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTL 175
BLAST of NO13G00650 vs. NCBI_GenBank
Match: XP_012893775.1 (uncharacterized protein [Blastocystis hominis] >CBK19727.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 73.6 bits (179), Expect = 5.900e-9 Identity = 48/170 (28.24%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKF-VELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALR 204 G GK+ LL +Y S F+ + T G+ K + + G+ VK + T+ + + + ++ ++ ++ +YD TDR+SF + ++Q+ +V+++ L+ K + + +RAVS+ EG +LA R G+PF ETSA+T + V++AF +L R Sbjct: 21 GVGKTCLLMQYASKTFIKTFITTIGIDFKIKTVNVLGK------TVKLQIWDTAGQERFRTITTSYVRGSEGILLVYDVTDRNSFESISSWMEQISQHADSSVNKI---LIGNKC------DLEAQRAVSTEEGRKLAERFGIPFAETSAQTNQNVDEAFMTLAEAVVKR 175
BLAST of NO13G00650 vs. NCBI_GenBank
Match: XP_003557424.1 (ras-related protein RABE1e [Brachypodium distachyon] >KQK20459.1 hypothetical protein BRADI_1g54630v3 [Brachypodium distachyon]) HSP 1 Score: 73.6 bits (179), Expect = 5.900e-9 Identity = 56/176 (31.82%), Postives = 85/176 (48.30%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKF-VELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALRVALTCA 210 G GKS LL R+ F +S T G+ + + L GR VK + T+ + + + A ++ +YD TD SSF+ + + Q+ A V+ +L+ K + D KR VS+A+G +LA G+ FFETSA+T + VEQ F S+ R R+ T A Sbjct: 25 GVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGR------RVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH---ASDNVNKILVGNKV------DMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLTETVA 185
BLAST of NO13G00650 vs. NCBI_GenBank
Match: AJT26677.1 (Ypt53p [Saccharomyces cerevisiae YJM1402] >AJT33698.1 Ypt53p [Saccharomyces cerevisiae YJM1573]) HSP 1 Score: 73.6 bits (179), Expect = 5.900e-9 Identity = 53/181 (29.28%), Postives = 90/181 (49.72%), Query Frame = 0 Query: 17 TFPLRVFVVGAKGAHALEGPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKF-VELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSL 197 T ++V ++G GKS+++ R++S F S +PT G A TK IT G+V +KF + T+ + LAP + A A + ++D T+ SF + + V + H + L+ K + N ++++E RA+ + L R + +FETSA+TGE + Q F +L Sbjct: 10 TLTIKVVLLGESAV------GKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKV------IKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQN---WVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFETSAKTGENIYQIFQTL 175
BLAST of NO13G00650 vs. NCBI_GenBank
Match: ODQ74392.1 (hypothetical protein LIPSTDRAFT_69999 [Lipomyces starkeyi NRRL Y-11557]) HSP 1 Score: 73.6 bits (179), Expect = 5.900e-9 Identity = 56/173 (32.37%), Postives = 86/173 (49.71%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKG-RVLTRILNVKFVELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALRVAL 207 G GKS LL R+ F S T G+ + I L G R+ +I + T+ + + + A ++ +YD TD SF+ + ++ V Q+ V++ LL+ K + +EKRAVS+ +G LA+ LG+PF E SA+ VE+AF SL R+ RV L Sbjct: 20 GVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKMQIWD------TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRNWFSNVEQHASEGVNK---LLIGNKC------DWEEKRAVSTEQGKALANELGIPFIEASAKANINVEEAFVSLARQIKQRVDL 177
BLAST of NO13G00650 vs. NCBI_GenBank
Match: OMJ79838.1 (hypothetical protein SteCoe_20034 [Stentor coeruleus]) HSP 1 Score: 73.6 bits (179), Expect = 5.900e-9 Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKFVELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALRVAL 207 G GKS+LL R+ + S T GV K I ++ +V+ + T+ + + + + A V+ +YD T+R +F+ ++ +++Y V+R LL+ K + D KRAVS+ EG A LG+PF ETSA+T VEQ+F + RVA+ Sbjct: 19 GVGKSSLLLRFADNTYTESFIATIGVDFKIKTIDVESKVIK-----LQIWDTAGQEKFRTITSSYYRGAHGVIVVYDVTNRETFNNVKNWMGEISRYASENVNR---LLIGNKCDC------DTKRAVSTEEGKEFADSLGIPFMETSAKTSSNVEQSFFRMASEIKSRVAV 176
BLAST of NO13G00650 vs. NCBI_GenBank
Match: OAO17152.1 (Rab8 family GTPase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 73.2 bits (178), Expect = 7.700e-9 Identity = 48/170 (28.24%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKGRVLTRILNVKF-VELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALR 204 G GK+ LL +Y S +F+ + T G+ K + + G+ VK + T+ + + + ++ ++ ++ +YD TDR+SF + ++Q+ +V+++ L+ K + + +RAVS+ EG +LA + G+PF ETSA+T V++AF SL R Sbjct: 21 GVGKTCLLMQYASKNFIKTFITTIGIDFKIKTVNVCGK------TVKLQIWDTAGQERFRTITTSYVRGSEGILLVYDVTDRNSFESISSWMEQISQHADSSVNKI---LIGNKC------DLEAQRAVSTEEGKKLAEKFGIPFAETSAQTNTNVDEAFMSLAEAVVKR 175
BLAST of NO13G00650 vs. NCBI_GenBank
Match: XP_003564571.1 (ras-related protein RABE1c [Brachypodium distachyon] >KQK10493.1 hypothetical protein BRADI_2g54460v3 [Brachypodium distachyon]) HSP 1 Score: 72.8 bits (177), Expect = 1.000e-8 Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 0 Query: 35 GPGKSTLLERYLSTHFLSSHQPTQGVASNTKHITLKG-RVLTRILNVKFVELTSDPAQLVALAPTSLKKADAVVFIYDSTDRSSFSRLEGLYALVAQYTRPAVHRVSGLLLATKANSKNTNNKDEKRAVSSAEGLRLAHRLGVPFFETSAETGEYVEQAFDSLVRRTALRVALT 208 G GKS LL R+ F +S T G+ + I L G R+ +I + T+ + + + A ++ +YD TD SSF+ + + Q+ V++V L+ KA+ + KRAVS+A+G LA G+ FFETSA+T VEQ F S+ R R+A T Sbjct: 26 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD------TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKV---LIGNKADM-----DESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAET 185 The following BLAST results are available for this feature:
BLAST of NO13G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00650 ID=NO13G00650|Name=NO13G00650|organism=Nannochloropsis oceanica|type=gene|length=5825bpback to top protein sequence of NO13G00650.1 >NO13G00650.1-protein ID=NO13G00650.1-protein|Name=NO13G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1459bpback to top Synonyms
Publications
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