NO13G00550, NO13G00550 (gene) Nannochloropsis oceanica

Overview
NameNO13G00550
Unique NameNO13G00550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5484
Alignment locationchr13:189425..194908 +

Link to JBrowse

Properties
Property NameValue
DescriptionRab3 GTPase-activating protein catalytic subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:189425..194908 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO:0005096GTPase activator activity
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3-GAP_cat_su
Vocabulary: Biological Process
TermDefinition
GO:0043547positive regulation of GTPase activity
Homology
BLAST of NO13G00550 vs. NCBI_GenBank
Match: EWM21725.1 (hypothetical protein Naga_101008g2 [Nannochloropsis gaditana])

HSP 1 Score: 255.8 bits (652), Expect = 6.400e-64
Identity = 312/573 (54.45%), Postives = 364/573 (63.53%), Query Frame = 0
Query:  590 LTEDGVLQHRQLLNQALRGR--------------------XXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLE----GRGERRGGREGPPWPLEGEEERVAILRLFNSAG---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPYTEAGMPAPPDMKTYVLRCKTFNPFHRGIVGG----------GGEGEGGREEEVAVMSRLYACLDREEDSVRLALAWAEAEV 1120
            +TED VLQ RQLLNQALR R                       XXXXXXXXXX    GL  +L++L  PK+ +DM+AFKAANPH+VLADF+RWQ P+AWV  EG G            A+   W   G +D  ++ +HW+L   +L + W  A  IPA +Q PLFQE   AE++LHFLET+ PA LLCQ LAA F+TV  LL  APTP V  P T+A+L  L  LI  AI++LH+ QT+ E++L  PPSSS                     ERVC+ VA +E+RLRC T+L   LP Q RL+E ++E    G G+ RGG E  P PL  + ER A+L+LFNSAG         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXX  PPY EAGMP+PP++KTYVLR    NPF+  +  G                       V SRL+A +DR+EDS+RLALA AE+EV
Sbjct:    1 MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEXXXXXXXXXXADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEG-GVXXXXXXXXXXXAM--EWGSLGHLDRAQVEAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSXXXXXXXXXXXXXXXXXXXXXERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGG-ERAPMPLRDDSERTAVLKLFNSAGGFVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSCSDLPIPARRIMAEKKDRDXXXXXXXXXXXXXXXXXXXXXXXXALPPYVEAGMPSPPEVKTYVLRLTDMNPFYPRMAPGXXXXXXXXXXXXXXXXXXXXXXXVTSRLFASMDRKEDSLRLALAHAESEV 569          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_002183212.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45430.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 122.1 bits (305), Expect = 1.100e-23
Identity = 105/330 (31.82%), Postives = 148/330 (44.85%), Query Frame = 0
Query:  582 PVLQYGCPLTEDGVLQHR-QLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG---RVDVDKLNSHWHLSSKQ---LKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLEGRGERRGGREGPPWPLEGEEERVAILR 905
            P LQ   PLT+D + Q R  LL Q   G+                   M V   L +PKL++DM+AFKAANP+++  DF+ W          G   D  E E EE  ++  R PG        +DK     ++ S         W+ A+P+ A  Q PLF  T   E +L FLET+ PA LLCQ++A   +  +F L+ +   A  +    A+L +L   ++ A   +  + T+           S  +     S R VS   LSACE  CV +   E  +  A SLLHK P Q++ VE +L+         EG    L GE  R  IL+
Sbjct:  937 PYLQRPYPLTDDVITQRRMMLLKQKSSGKASSTVLRR-----------MEVAHLLQKPKLLSDMQAFKAANPNAIFQDFVNWY---------GNPRDPLE-EYEESLSLALR-PGTSDTIETKLDKAKEGIYVLSMTRDFWTGTWKEAKPLSASFQEPLFDATMTVEMMLDFLETLHPATLLCQIMAVNLTAAYFTLSISAGEATNIESVMAALEYLRGKVEQACQLISVDTTAGSGPREKGEDESKDV-----SCRIVSVESLSACENACVAIGEAEFIISKAKSLLHKFPGQYQFVECILK-------NPEGCVADLCGENGRRDILK 1232          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAX19497.1 (hypothetical protein FisN_19Hh072 [Fistulifera solaris])

HSP 1 Score: 120.2 bits (300), Expect = 4.200e-23
Identity = 97/313 (30.99%), Postives = 148/313 (47.28%), Query Frame = 0
Query:  574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVE---------EEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALL 877
            RR   V  P LQ   PLT+D V Q R ++++    +                +  + V  +L  PKL++DM+AFKAANP +V  DF+ W   PD  +E          + +GE      M  D A       +    +D +   W          W+ A+PIPAV Q PLF  +   E  + +LETI PA LLCQV+A   +  +F L  +   AV +   R+SL      + +A+ +L  + T  +   A   ++ +S+         VS   L+AC R C+ +   E ++  A SLL+KLP+Q RLVE+++
Sbjct:  820 RRADQVYAPYLQRPMPLTDDVVAQRRAMMSRQKNVK-----------GSSTMKHRIEVAQRLQHPKLLSDMQAFKAANPGAVFEDFVNWYGNPDNPLEGFDQKDFFTGKLDGESAMSPGMNSDKA------AEAIRVIDDIRKFW-------ARTWDEAKPIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATFGDRTTA-DSTNLMSV---------VSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1098          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAX09576.1 (hypothetical protein FisN_19Lh072 [Fistulifera solaris])

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-21
Identity = 91/302 (30.13%), Postives = 144/302 (47.68%), Query Frame = 0
Query:  579 VVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVE--EEGEGEDGGEDEMEEDC-AVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALL 877
            V  P LQ   PLT+D V Q R ++++                     +  + V  +L  PKL++DM+AFKAANP ++  DF+ W   PD  +E  ++ +   G  D       ++R     +    +D     W          W+ A+ IPAV Q PLF  +   E  + +LETI PA LLCQV+A   +  +F L  +   AV +   R+SL      + +A+ +L  + T  +   A   ++ +S+         VS   L+AC R C+ +   E ++  A SLL+KLP+Q RLVE+++
Sbjct:  832 VYAPYLQRSMPLTDDVVAQRRLMMSR-----------QKTVKGSSTIKHRIEVAQRLQHPKLLSDMQAFKAANPGAIFEDFVNWYGNPDNPLEGFDQKDFFTGNLDSASATSPSMRSEKAAEANRVLDDTRKFW-------ARTWDEAKSIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATYGDRTTA-DSTNMMSV---------VSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1105          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: OUZ99155.1 (Rab3 GTPase-activating protein catalytic subunit [Macleaya cordata])

HSP 1 Score: 103.6 bits (257), Expect = 4.100e-18
Identity = 104/446 (23.32%), Postives = 163/446 (36.55%), Query Frame = 0
Query:  319 SLAFGSVETLRGMASVWANVVRELRWRWDRGMRVPRMKGEGEVGREGGVDLTACLLHQKLQVLDLCCQRRHAKVQXXXXXXXXXXXXXXKVSPDSLXXXXXXSMLEVQMAGVFATPPQSERGGREGEXXXXXEAFPNAASVGHRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQVHTLPPSLPPPLSLPPTGRGHHHRHFSFERVGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMLRKGRRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAF 765
            SL FG+   +R +A +W   VRE+RW W+    +PRM+      R G +DL+ CL+HQKLQ+L +C +++H                  + SP                  V   P Q      + +     +   N+ +   R                                          +T P +    ++L P  R    R  S   VG++                                        ++++   +   P T+D  +    +  + LR                          +L R  L +DM AFKAANP +V  DFIRW +P  W  E GE E+ G  E  +   +   WP +GR+  ++++ H        + +W  A  +PA +Q+PL     E EKILH+LET+ P  LL Q++  AF
Sbjct:  422 SLWFGNC-NIRAVAMLWIEFVREVRWCWEELQPLPRMQ------RNGSIDLSTCLIHQKLQMLAICIEKQHQSEHNSVESEYHTDSGNEEGSP------------------VGGNPTQIGTSTEKFDVKRDSQPEVNSGTTVKRS-----------------------------------------NTDPENDVTSVNLQPPAR---IRRGSAGVVGSM----------------------------------------MLLNSYQRMHAPYTQDAPIMTEDMHEERLRA-------------VEALGNAFNFSAQLERDILSSDMSAFKAANPDAVFEDFIRWHSPGDW--ETGEMEESGRSEDHKMEGLNDEWPPRGRLS-ERMSEH----GNSWRQLWNDAPELPASEQKPLLDPNREGEKILHYLETLRPHQLLEQMVCTAF 738          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAY02032.1 (Hypothetical protein PINS_009873 [Pythium insidiosum])

HSP 1 Score: 103.2 bits (256), Expect = 5.300e-18
Identity = 93/326 (28.53%), Postives = 150/326 (46.01%), Query Frame = 0
Query:  574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG------RVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLL-TQA-PTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKL---------PNQHRLVEALLEGRGER 883
            R + +++ P  Q   P TED V Q ++LL++                     +    +  ++    L++DM++FKAANP S LADF+RW +P  W+E++     G   E +      + + G G      RV+ D+ + + HL  +    IWE+  P+PA +Q+ LF    E+EKI H+LETI P  +  Q L  A S+ + +L T A P PA +LP    +L  L      A++ L +     + VL   P             +   +  + AC R+      VE  L  +++LL  L         P+  RLV+AL+  + +R
Sbjct:  581 RTNAMMMEPETQAAVPATEDIVKQQQELLSR-----------------LGVNKESAMLRQQIQSISLVSDMQSFKAANPDSCLADFVRWYSPKDWIEDKSLSGSGLPAEGKN----LWWFEGAGMLSERMRVNDDEGSKYGHLWHR----IWESCAPLPASKQKRLFDPVEESEKIYHYLETISPHEMFHQTLVGAISSCYSILETMALPFPARSLPTVATALDSLREQCNVAVSLLDDALAQSQVVLPTGPDQREEQKKAKSQLQVAFEMAIDACWRMTRGFEQVEIMLSQSSALLKYLVSSDEDGPTPDILRLVDALITAKIDR 881          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_002292469.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90444.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 102.8 bits (255), Expect = 6.900e-18
Identity = 86/304 (28.29%), Postives = 135/304 (44.41%), Query Frame = 0
Query:  582 PVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVEEEGEGEDGGEDEM-------EEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLE 878
            P LQ   P+T++   + ++LL  + +                  +  + +  +L +PKL++DM +FKAAN  +V  DF+RW   P   + EE  GE              EE   +      +    +  L + W  S       W+ A P PA +Q PLF      E + H  ETI PA L+ Q LA   +   F+L  A  P   +P  + +L HL   I  AI  L ++  + E  L   P SS + S P      VS   +++CE  C  +  +E  L  + +LL + P Q++LV++ L+
Sbjct: 1858 PYLQRTMPVTDEEEEKQKKLLGVSRKDE---------DEKRVSIQSRIAISQRLQKPKLLSDMSSFKAANQGAVFEDFVRWYGNPQNPLSEEVNGETARRAAQYRSKLPPEEAKVLALEEASEAIAILMSLRAFWEDS-------WDEAEPCPAFEQEPLFDPYSTVEMVFHSFETIHPAILMEQALAVNLANARFVLEVATKPVKQVPSIKRALHHLLTSIDTAIERLTKD--AAEGCLFTSPRSSSNKSEPLVY---VSTSTITSCEEACDAIGEMEILLSRSLALLQQFPGQYKLVDSFLQ 2140          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAQ90863.1 (hypothetical protein KFL_006940020 [Klebsormidium nitens])

HSP 1 Score: 102.8 bits (255), Expect = 6.900e-18
Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0
Query:  632 LTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRF-RWPGQGRVDVD-KLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLEGRGERRGGREGPPWPLEGE 897
            L +L    L +DM AFKAANP ++L DF+RW +P  W+ E+                     WP QG+V    + +S W         +WE A  +P   QRPLF  T EAEK+LH+L+TI P  LL Q+LA AF +   LL  A           AS+  +S L K                LA   S +L +       +  S G  S+ E +C     +E  +  A SL HKLP + +LV  LL     +   R  PP  L+ E
Sbjct:  717 LARLHSRMLSSDMSAFKAANPGALLEDFVRWHSPRDWLPEDSXXXXXXXXXXXXXXXXGVPGWPPQGKVSRRMQADSFW-------GELWERAEALPVTDQRPLFDHTREAEKVLHYLDTIEPQDLLPQMLATAFYSALDLLAAA---------RGASVPTVSELRK---------------ALASEMSGALDLGLLQQQTKDESTGIQSSLEALCNRFEELEALIVRAASLSHKLPGRPQLVSELLS--AVQLSNRGDPPSSLKVE 950          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_011094487.1 (rab3 GTPase-activating protein catalytic subunit [Sesamum indicum])

HSP 1 Score: 98.6 bits (244), Expect = 1.300e-16
Identity = 70/238 (29.41%), Postives = 106/238 (44.54%), Query Frame = 0
Query:  640 LMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVD--VDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEAL 876
            L +DM AFKAANP +V  DFIRW +P  W  +  E  +      EE+ A  + WP +GR+   +  + + W       + IW  A P+PA +Q+PL     E EK+LH+LET+ P  LL Q+++ AF     +L Q  T    L      +  L   + + + Y+    T+ +S +                        +    R+CV    +E  +  A SL  K      LVEA+
Sbjct:  592 LASDMSAFKAANPDAVFEDFIRWHSPKDWESDCSEKLEESRTYSEEESA--YEWPPRGRLSERMSDIGNSW-------RKIWNEALPLPASEQKPLLDPNREGEKVLHYLETLRPHQLLSQMVSTAFRAAADILNQ--TSFGGLKQMTTKMGQLYITMASILKYMQSYNTTSDSEV------------------------IEDLSRLCVTFEHIEKLILLAASLHCKFLQSPHLVEAI 794          
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAY06732.1 (Hypothetical protein PINS_014536, partial [Pythium insidiosum])

HSP 1 Score: 97.4 bits (241), Expect = 2.900e-16
Identity = 85/300 (28.33%), Postives = 138/300 (46.00%), Query Frame = 0
Query:  574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG------RVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLL-TQA-PTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKL 866
            R + +++ P  Q   P TED V Q ++LL++                     +    +  ++    L++DM++FKAANP S LADF+RW +P  W+E++     G   E +      + + G G      RV+ D+ + + HL  +    +WE+  P+PA +Q+ LF    E+EKI H+LETI P  +  Q L  A S+ + +L T A P PA +LP    +L  L      A++ L +     + VL   P             +   +  + AC R+      VE  L  +++LL  L
Sbjct:  260 RTNAMMMEPETQAAVPATEDIVKQQQELLSR-----------------LGVNKESAMLRQQIQSISLVSDMQSFKAANPDSCLADFVRWYSPKDWIEDKSLSGSGLPAEGKN----LWWFEGAGMLSERMRVNDDEGSKYGHLWHR----MWESCAPLPASKQKRLFDPVEESEKIYHYLETISPHEMFHQTLVGAISSCYSILETMALPFPARSLPTVATALDSLREQCNVAVSLLDDALAQSQVVLPTGPDQREEQKKAKSQLQVAFEMAIDACWRMTRGFEQVEILLSQSSALLKYL 534          
The following BLAST results are available for this feature:
BLAST of NO13G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21725.16.400e-6454.45hypothetical protein Naga_101008g2 [Nannochloropsi... [more]
XP_002183212.11.100e-2331.82predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX19497.14.200e-2330.99hypothetical protein FisN_19Hh072 [Fistulifera sol... [more]
GAX09576.11.300e-2130.13hypothetical protein FisN_19Lh072 [Fistulifera sol... [more]
OUZ99155.14.100e-1823.32Rab3 GTPase-activating protein catalytic subunit [... [more]
GAY02032.15.300e-1828.53Hypothetical protein PINS_009873 [Pythium insidios... [more]
XP_002292469.16.900e-1828.29predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAQ90863.16.900e-1832.96hypothetical protein KFL_006940020 [Klebsormidium ... [more]
XP_011094487.11.300e-1629.41rab3 GTPase-activating protein catalytic subunit [... [more]
GAY06732.12.900e-1628.33Hypothetical protein PINS_014536, partial [Pythium... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001847NSK001847Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00550.1NO13G00550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101008g2gene8703Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00550.1NO13G00550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00550 ID=NO13G00550|Name=NO13G00550|organism=Nannochloropsis oceanica|type=gene|length=5484bp
ACAGCGACGACGACAACAAGCTTTTTCTAATTTCTGAGGCGTAGTGGGAA
GAACGGCGGCGGCATAAGTGAGGAACGGGTAGGTTGCTTGCGAGTGATAA
GACGCAGGGGCATAGAACGAGGAGGAGCGCTAGGGCTGCAGCACGTAGTT
CATCACGACAAACGCACATCAGTCGCCACAAGATGGAGCAGGACAAAGAT
AAGGACGACTGGGCTTGGGAGGAGGAGGAAGAAGGAGAGGGAGGGAAGGA
AAACACGGGAGGAATTGCCACGAAGGACTTGTATGCCTCCCCGGCGGCCG
GCACTACGACTAGTGTCGATGCTCTGGCGGGGGCGCGTTGGGACAAAACG
AGTTTGGAGAAAGGAGGGGAGTCTCCTTCATCACCATCTTCTTCGGACTC
CTCCTCTATCCGAGCTGGTGATGAGAGAGAAGGAGATGAGGAGGAGGAGG
AGGAGGAGAAGGAGGAGGAGGAAAAGGAAGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGACGATTTCCTTGATTG
CCACGAAGAAGACCCTCATGCCCGGTATGTTGATTATTCATGTGCTACAC
CTTGGGAGTACTTCATATCGGACATCGAGGAACTGCTCCGAAAATGGCTG
AATGACGTCCGCCCTCCTCCTACCTCTTCCTCCCTCCCTTCCACCTCCTT
TCCTGCTACCGGCAAGACGGACCAGAATGAAGAGGTAACGGCGAAGGAGG
TAGACGAGGGGCATGTGCGAGTGCAGGAGGCGTCAATCACCTATGAAGGG
ACTGAGTATCGTTTTGTGTTTCACTTGGACACACGTCGAGGTGCCGCCAA
CAACGCCTGCAGCAGCAGTAACAACAACAACAACAACAACAACAAGAACA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACACAACACCAACAACA
AGGAGAAGAGATGAGAGGGGAGGAAGAAGCAGTGGCAGAGGAAATGGAGG
AGGTGGAGGAGGAGGAGGAAGAGGGAGGGAGGAAGCGGCATGTATGATGT
TGGCGCCCAAGCCGGAGGATGTATTATTGGATTTTGGATATCAGGTGGAG
GGTCTTCAGACGTGGTTCGGCGTAAGGAGCTTCATTTTCGTATGGAAAGT
GAAGGAGAGGAGGAGGGGGGGAAAGAAAGGGGAGGAGGAAGAAGAGGGGG
AGGAAGAGGGAGAGGAGGAGGAAGAGGGAGAGGGGGAGGAGGGGGGGGGG
ATGGAGCTGGGATGGGGAGGAGCGAGGCGGGAATGGTGTTGTCTTCGTTg
tcagtcgctttacacaactgtgggtgtggtttgccagcttttgtgcctgt
ggggaaacgtccaccccctccctccttcccttcctcgtcctcgccctccc
ccttcgccacggtgctacgggtggagaccaaaagcatgaaggaggtgcgc
agcaggcgttacagttggcgacagcacctctattcctccctcccaccctc
cctcccttcctcgttttcgtcctcgaagatagcgctgggtggagggtatt
tggacggggaggagatgatgggatatgcccctcctcctgcagAGACCCTG
CTGCCTCCGTCCTCGCTGTTGCTGGGAAAGGAAGAGGAGGAGGAGGAAGA
GAAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAAGAAGAGGAGACGAACGAAAGGTTTTCATCTGTTACCACTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACCGCTTCCCCCTCCCGC
GACAATGCGTTTTGAAACGAGCTGTTTGAAGCATCCTCCCGAGGTGTGGA
GGACACTCGACGGGCTAGTAGGGGTACTTCAGGACAAAGTAGAGAGGGAG
GGAGGGAGGGGGCGGGGGCGGGTGAGCGTGAAGGTCAGGGCGGAGCATAC
CTGGTCGTGGGTTGGGGAGAGAGATGGATGGGCACTGAAGAGGAATGAGT
GGAGGGTGAGTGCAGCCATGGAGGAAAGTCAGGCATATGCTGCCCGGGCT
TTCCGTACATCACCAAAAGGAGGAGGGCGGGAAGGAGGGCGGGGAGGAGG
CGAGGCAGCAGCGAAGAAGAAGAAAGAGGTATTGGCGCTGCTTTATCGAG
CGGCTTGTGCCAACCCGGAGGAGATGGAGGAGGGAAGGAGGGAGGGAAGG
AAGGAGGGAGGGAGGGAGGGACGAGTGGTATTGCCGGGATCGGGGACGGA
CCCACTGGAGGCGCTCTATGTGCACgtgaggtgggaagagctggagggag
ggagggaaggagggagtgagggagggacgtcctttgtagacaacaccttc
tattcctcactcaatcccatgtctgctcccccctcctcctggttcgtctc
cgcagtcttccgtcccgacgccgcccttccccctcccccccctcctcctc
ctttgccactgctgcttcctccccctacccccctatcccctctcttcctt
cttcctctttccctccttccctgctccctcctcctcggagcaattccgac
agccaaaccctccctccccctttccctccctccagCCTTGCCCCCCTCTC
CTCCCTCCTTCGCTCCCTCCTCGCCTCCTATATCGCTGCCCAGGCCATCT
CCCCCGGCACCATCATGTTGGAAGTCGCGAGGGAGGAAGGGAGGGAGGGA
GGGGGGTGGAGGAGGAAGCAGATCGGGCAGAGAGCGCGCGGTTGGCAGTT
AGTATGGCGGCTTATCTCGGTCCTCGAATGAAAGATTTGGTCAAGGTGTT
GGGCTCAAGGCCGCCGCCAGTGCCGCGGGAGATAGAGGAGGCGAGTGCGA
TGGTGCTCTCGCCCCCGGGGGAGGAGGAGGAGGAGGAAGAGAAGAAGAGA
GGAGGAAAGAAGGAGAAGGGGGTGGCGTGCAAGAAGAAGAGGAAGAAGAA
GAAGAGAGGGAAGGGAGGCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCTCCCTGTCTCTGTCCCTCGACGTAATGAATGCTCCCGTCGCT
CAATTCCTCTCCGTCCTTTCTCTTGCATTTGGGAGTGTGGAGACTCTCCG
CGGCATGGCCAGTGTATGGGCCAATGTCGTAAGGGAGCTAAGATGGAGGT
GGGACAGGGGGATGCGGGTCCCCCGAATGAAGGGTGAGGGGGAGGTAGGG
AGGGAGGGAGGGGTGGACTTGACGGCGTGTCTGTTGCACCAAAAGCTGCA
GGTGCTCGATTTGTGTTGTCAGCGACGACATGCCAAGGTCCAAGCGGCGG
CTGCTGCGGCTTCTTCGACTTCGAAGAACGTGAGAAAGGTTAGTCCTGAC
TCCCTCCCTCCCTCCCCCCCTCCCTCGATGCTGGAGGTGCAGATGGCTGG
TGTGTTCGCAACGCCGCCCCAGTCGGAGAGGGGAGGGAGGGAGGGAGAGA
GGGAGGGAGGGAGGGAGGCTTTTCCTAATGCTGCTTCTGTTGGTCATCGG
CATCGGGGGGGCGGGAAGGAGGGAAGGGAGGAGGAAGGGGAAGAAAGGGA
GGAGGAAGGGGAGGAGGACGACGACGACAGCGAGTTCTTCGAAGCACAAG
ACGACGACGGCGCTGTCGATCAAGTTCATACCCTCCCTCCCTCCCTCCCT
CCCCCCCTCTCTCTCCCTCCCACCGGAAGAGGGCACCATCACCGCCATTT
TTCTTTTGAGCGAGTGGGGGCGTTGGGAGCCGTGATGGTGAAAAGGAAGA
AGGAGGCGGAGACGGGTGAGGAGGCGGAGAAGGCGGAGGAGGAGGAGGAG
CAAGAGGTGCTTCAGTATATGCTGAGGAAGGGGAGGAGGGACACCGTTGT
GGTTCATCCGGTGCTTCAATACGGCTGTCCTCTGACCGAAGATGGCGTGC
TGCAACACAGGCAGTTGCTCAATCAGGCCTTGAGGGGGAGGAAGGGGGGG
AAGGAGGGCGGGAAGGAGGAAGAGGACGAGGAGGACCGAAGGGGTCTAAT
GACGGTGTTGACGAAATTGATCCGGCCGAAATTAATGGCAGATATGGAGG
CCTTTAAAGCTGCCAATCCCCATTCCGTGCTTGCGGACTTTATCCGATGG
CAAGCCCCCGATGCCTGGGTCGAGGAGGAGGGCGAGGGGGAGGATGGGGG
GGAGGATGAGATGGAGGAGGACTGTGCCGTCCGGTTCCGCTGGCCTGGGC
AGGGACGCGTGGACGTGGACAAGCTGAATTCCCACTGGCACCTATCATCC
AAACAGCTCAAATCCATCTGGGAGACAGCGCGGCCCATACCGGCGGTGCA
GCAACGTCCTTTGTTTCAAGAAACGCACGAGGCGGAGAAAATCCTTCATT
TCCTGGAGACTATCCCGCCCGCCCACCTCCTCTGTCAAGTCCTCGCGGCT
GCATTCAGCACCGTCTTTTTCCTCCTCACTCAAGCCCCTACTCCTGCAGT
AGCCCTCCCTGGTACCCGAGCCTCCCTCTCCCATCTCTCTGCACTCATTA
AAAACGCCATTGCTTACCTACACGAAGAGCAGACCTCCCCCGAGTCCGTC
CTTGCCCTCCCTCCCTCCTCCTCCCTCTCCATCTCTCCCCCGCCACCTTC
CCGTCGTCCCGTAAGCCAAGGCTGTTTGAGCGCATGTGAGCGTGTCTGCG
TCATGGTAGCAGCTGTGGAAGACCGGCTGCGGTGTGCCACATCGCTCCTA
CACAAATTACCCAACCAACACAGGCTCGTTGAGGCCCTGCTCGAAGGGAG
GGGAGAGAGAAGGGGAGGGAGGGAGGGGCCGCCATGGCCTTTGGAAGGGG
AGGAGGAACGAGTGGCGATTTTAAGGTTGTTTAATAGTGCGGGGGGAAAG
CTGACTGGAGGACCTTTGTTGGAGGAGGAGGAGGAGGATGATGAAGATGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGGTGGTGGTGGTGGGAGCAG
AAGGGAAGGAGAAAGAGAGGGAGGGAGAGGAAGAGGAGGAGGAGGAGGAC
GAGGAAGATGAACTTTTGCATGAGTACAGCGAAAGGAAGAAGGGGAAGCA
TCGGAATACACGCGATGACGGCAATATTTCCTCTCCTCAGTCTCACACGA
ATGGTAGCAAAAAGAGGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGCC
TCTACTTCCTCCGCTTTTCCCAGCAACAAAAGTAAGGAAGAAGAGGAGGA
GGAAGAAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGATGCTATTC
CTCCCTATACAGAGGCAGGGATGCCTGCCCCTCCTGACATGAAGACGTAC
GTCCTTCGATGTAAAACATTCAATCCTTTCCATCGAGGCATAGTGGGAGG
AGGGGGAGAAGGAGAGGGAGGGAGGGAGGAAGAAGTGGCGGTGATGAGTC
GGCTGTATGCGTGCTTGGATCGGGAGGAGGATAGTGTGAGGTTGGCCTTG
GCCTGGGCTGAAGCGGAGGTATAGGTGGGTGGGA
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protein sequence of NO13G00550.1

>NO13G00550.1-protein ID=NO13G00550.1-protein|Name=NO13G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1120bp
MRFETSCLKHPPEVWRTLDGLVGVLQDKVEREGGRGRGRVSVKVRAEHTW
SWVGERDGWALKRNEWRVSAAMEESQAYAARAFRTSPKGGGREGGRGGGE
AAAKKKKEVLALLYRAACANPEEMEEGRREGRKEGGREGRVVLPGSGTDP
LEALYVHPCPPLLPPSLPPRLLYRCPGHLPRHHHVGSREGGREGGRGVEE
EADRAESARLAVSMAAYLGPRMKDLVKVLGSRPPPVPREIEEASAMVLSP
PGEEEEEEEKKRGGKKEKGVACKKKRKKKKRGKGGIPPSLPPSLPPSLSL
SLSLDVMNAPVAQFLSVLSLAFGSVETLRGMASVWANVVRELRWRWDRGM
RVPRMKGEGEVGREGGVDLTACLLHQKLQVLDLCCQRRHAKVQAAAAAAS
STSKNVRKVSPDSLPPSPPPSMLEVQMAGVFATPPQSERGGREGEREGGR
EAFPNAASVGHRHRGGGKEGREEEGEEREEEGEEDDDDSEFFEAQDDDGA
VDQVHTLPPSLPPPLSLPPTGRGHHHRHFSFERVGALGAVMVKRKKEAET
GEEAEKAEEEEEQEVLQYMLRKGRRDTVVVHPVLQYGCPLTEDGVLQHRQ
LLNQALRGRKGGKEGGKEEEDEEDRRGLMTVLTKLIRPKLMADMEAFKAA
NPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVD
VDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETI
PPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIA
YLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAA
VEDRLRCATSLLHKLPNQHRLVEALLEGRGERRGGREGPPWPLEGEEERV
AILRLFNSAGGKLTGGPLLEEEEEDDEDEEEEEEEEEEQVVVVGAEGKEK
EREGEEEEEEEDEEDELLHEYSERKKGKHRNTRDDGNISSPQSHTNGSKK
REEKEEEEEEEASTSSAFPSNKSKEEEEEEEEEEEEEEEEEEDAIPPYTE
AGMPAPPDMKTYVLRCKTFNPFHRGIVGGGGEGEGGREEEVAVMSRLYAC
LDREEDSVRLALAWAEAEV*
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Synonyms
Publications