NO13G00550, NO13G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00550 vs. NCBI_GenBank
Match: EWM21725.1 (hypothetical protein Naga_101008g2 [Nannochloropsis gaditana]) HSP 1 Score: 255.8 bits (652), Expect = 6.400e-64 Identity = 312/573 (54.45%), Postives = 364/573 (63.53%), Query Frame = 0 Query: 590 LTEDGVLQHRQLLNQALRGR--------------------XXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLE----GRGERRGGREGPPWPLEGEEERVAILRLFNSAG---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPYTEAGMPAPPDMKTYVLRCKTFNPFHRGIVGG----------GGEGEGGREEEVAVMSRLYACLDREEDSVRLALAWAEAEV 1120 +TED VLQ RQLLNQALR R XXXXXXXXXX GL +L++L PK+ +DM+AFKAANPH+VLADF+RWQ P+AWV EG G A+ W G +D ++ +HW+L +L + W A IPA +Q PLFQE AE++LHFLET+ PA LLCQ LAA F+TV LL APTP V P T+A+L L LI AI++LH+ QT+ E++L PPSSS ERVC+ VA +E+RLRC T+L LP Q RL+E ++E G G+ RGG E P PL + ER A+L+LFNSAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX PPY EAGMP+PP++KTYVLR NPF+ + G V SRL+A +DR+EDS+RLALA AE+EV Sbjct: 1 MTEDSVLQRRQLLNQALRARTTRRTGTLRGKERGREPAPKAGEXXXXXXXXXXADPGGLEVLLSQLTGPKITSDMQAFKAANPHAVLADFLRWQVPEAWVPGEG-GVXXXXXXXXXXXAM--EWGSLGHLDRAQVEAHWNLPLGRLVAFWREAPAIPAARQAPLFQEALAAEQVLHFLETLSPASLLCQALAAGFATVLCLLRHAPTPTVHGPATQAALDQLEGLIDEAISHLHDHQTTSEAMLFPPPSSSXXXXXXXXXXXXXXXXXXXXXERVCLAVARIENRLRCTTALWQVLPAQMRLIEGMVEGWEGGEGKGRGG-ERAPMPLRDDSERTAVLKLFNSAGGFVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSCSDLPIPARRIMAEKKDRDXXXXXXXXXXXXXXXXXXXXXXXXALPPYVEAGMPSPPEVKTYVLRLTDMNPFYPRMAPGXXXXXXXXXXXXXXXXXXXXXXXVTSRLFASMDRKEDSLRLALAHAESEV 569
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_002183212.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45430.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 122.1 bits (305), Expect = 1.100e-23 Identity = 105/330 (31.82%), Postives = 148/330 (44.85%), Query Frame = 0 Query: 582 PVLQYGCPLTEDGVLQHR-QLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG---RVDVDKLNSHWHLSSKQ---LKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLEGRGERRGGREGPPWPLEGEEERVAILR 905 P LQ PLT+D + Q R LL Q G+ M V L +PKL++DM+AFKAANP+++ DF+ W G D E E EE ++ R PG +DK ++ S W+ A+P+ A Q PLF T E +L FLET+ PA LLCQ++A + +F L+ + A + A+L +L ++ A + + T+ S + S R VS LSACE CV + E + A SLLHK P Q++ VE +L+ EG L GE R IL+ Sbjct: 937 PYLQRPYPLTDDVITQRRMMLLKQKSSGKASSTVLRR-----------MEVAHLLQKPKLLSDMQAFKAANPNAIFQDFVNWY---------GNPRDPLE-EYEESLSLALR-PGTSDTIETKLDKAKEGIYVLSMTRDFWTGTWKEAKPLSASFQEPLFDATMTVEMMLDFLETLHPATLLCQIMAVNLTAAYFTLSISAGEATNIESVMAALEYLRGKVEQACQLISVDTTAGSGPREKGEDESKDV-----SCRIVSVESLSACENACVAIGEAEFIISKAKSLLHKFPGQYQFVECILK-------NPEGCVADLCGENGRRDILK 1232
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAX19497.1 (hypothetical protein FisN_19Hh072 [Fistulifera solaris]) HSP 1 Score: 120.2 bits (300), Expect = 4.200e-23 Identity = 97/313 (30.99%), Postives = 148/313 (47.28%), Query Frame = 0 Query: 574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVE---------EEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALL 877 RR V P LQ PLT+D V Q R ++++ + + + V +L PKL++DM+AFKAANP +V DF+ W PD +E + +GE M D A + +D + W W+ A+PIPAV Q PLF + E + +LETI PA LLCQV+A + +F L + AV + R+SL + +A+ +L + T + A ++ +S+ VS L+AC R C+ + E ++ A SLL+KLP+Q RLVE+++ Sbjct: 820 RRADQVYAPYLQRPMPLTDDVVAQRRAMMSRQKNVK-----------GSSTMKHRIEVAQRLQHPKLLSDMQAFKAANPGAVFEDFVNWYGNPDNPLEGFDQKDFFTGKLDGESAMSPGMNSDKA------AEAIRVIDDIRKFW-------ARTWDEAKPIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATFGDRTTA-DSTNLMSV---------VSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1098
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAX09576.1 (hypothetical protein FisN_19Lh072 [Fistulifera solaris]) HSP 1 Score: 115.2 bits (287), Expect = 1.300e-21 Identity = 91/302 (30.13%), Postives = 144/302 (47.68%), Query Frame = 0 Query: 579 VVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVE--EEGEGEDGGEDEMEEDC-AVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALL 877 V P LQ PLT+D V Q R ++++ + + V +L PKL++DM+AFKAANP ++ DF+ W PD +E ++ + G D ++R + +D W W+ A+ IPAV Q PLF + E + +LETI PA LLCQV+A + +F L + AV + R+SL + +A+ +L + T + A ++ +S+ VS L+AC R C+ + E ++ A SLL+KLP+Q RLVE+++ Sbjct: 832 VYAPYLQRSMPLTDDVVAQRRLMMSR-----------QKTVKGSSTIKHRIEVAQRLQHPKLLSDMQAFKAANPGAIFEDFVNWYGNPDNPLEGFDQKDFFTGNLDSASATSPSMRSEKAAEANRVLDDTRKFW-------ARTWDEAKSIPAVDQAPLFDASTSVEMAIDYLETIHPASLLCQVMAVNLAMSYFTLVVSAGEAVTVSVVRSSLVRFREHVVSALGHLAHDATYGDRTTA-DSTNMMSV---------VSIESLAACGRACLALGEAEVQVARARSLLNKLPHQVRLVESIM 1105
BLAST of NO13G00550 vs. NCBI_GenBank
Match: OUZ99155.1 (Rab3 GTPase-activating protein catalytic subunit [Macleaya cordata]) HSP 1 Score: 103.6 bits (257), Expect = 4.100e-18 Identity = 104/446 (23.32%), Postives = 163/446 (36.55%), Query Frame = 0 Query: 319 SLAFGSVETLRGMASVWANVVRELRWRWDRGMRVPRMKGEGEVGREGGVDLTACLLHQKLQVLDLCCQRRHAKVQXXXXXXXXXXXXXXKVSPDSLXXXXXXSMLEVQMAGVFATPPQSERGGREGEXXXXXEAFPNAASVGHRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQVHTLPPSLPPPLSLPPTGRGHHHRHFSFERVGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMLRKGRRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAF 765 SL FG+ +R +A +W VRE+RW W+ +PRM+ R G +DL+ CL+HQKLQ+L +C +++H + SP V P Q + + + N+ + R +T P + ++L P R R S VG++ ++++ + P T+D + + + LR +L R L +DM AFKAANP +V DFIRW +P W E GE E+ G E + + WP +GR+ ++++ H + +W A +PA +Q+PL E EKILH+LET+ P LL Q++ AF Sbjct: 422 SLWFGNC-NIRAVAMLWIEFVREVRWCWEELQPLPRMQ------RNGSIDLSTCLIHQKLQMLAICIEKQHQSEHNSVESEYHTDSGNEEGSP------------------VGGNPTQIGTSTEKFDVKRDSQPEVNSGTTVKRS-----------------------------------------NTDPENDVTSVNLQPPAR---IRRGSAGVVGSM----------------------------------------MLLNSYQRMHAPYTQDAPIMTEDMHEERLRA-------------VEALGNAFNFSAQLERDILSSDMSAFKAANPDAVFEDFIRWHSPGDW--ETGEMEESGRSEDHKMEGLNDEWPPRGRLS-ERMSEH----GNSWRQLWNDAPELPASEQKPLLDPNREGEKILHYLETLRPHQLLEQMVCTAF 738
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAY02032.1 (Hypothetical protein PINS_009873 [Pythium insidiosum]) HSP 1 Score: 103.2 bits (256), Expect = 5.300e-18 Identity = 93/326 (28.53%), Postives = 150/326 (46.01%), Query Frame = 0 Query: 574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG------RVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLL-TQA-PTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKL---------PNQHRLVEALLEGRGER 883 R + +++ P Q P TED V Q ++LL++ + + ++ L++DM++FKAANP S LADF+RW +P W+E++ G E + + + G G RV+ D+ + + HL + IWE+ P+PA +Q+ LF E+EKI H+LETI P + Q L A S+ + +L T A P PA +LP +L L A++ L + + VL P + + + AC R+ VE L +++LL L P+ RLV+AL+ + +R Sbjct: 581 RTNAMMMEPETQAAVPATEDIVKQQQELLSR-----------------LGVNKESAMLRQQIQSISLVSDMQSFKAANPDSCLADFVRWYSPKDWIEDKSLSGSGLPAEGKN----LWWFEGAGMLSERMRVNDDEGSKYGHLWHR----IWESCAPLPASKQKRLFDPVEESEKIYHYLETISPHEMFHQTLVGAISSCYSILETMALPFPARSLPTVATALDSLREQCNVAVSLLDDALAQSQVVLPTGPDQREEQKKAKSQLQVAFEMAIDACWRMTRGFEQVEIMLSQSSALLKYLVSSDEDGPTPDILRLVDALITAKIDR 881
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_002292469.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90444.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 102.8 bits (255), Expect = 6.900e-18 Identity = 86/304 (28.29%), Postives = 135/304 (44.41%), Query Frame = 0 Query: 582 PVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQA-PDAWVEEEGEGEDGGEDEM-------EEDCAVRFRWPGQGRVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLE 878 P LQ P+T++ + ++LL + + + + + +L +PKL++DM +FKAAN +V DF+RW P + EE GE EE + + + L + W S W+ A P PA +Q PLF E + H ETI PA L+ Q LA + F+L A P +P + +L HL I AI L ++ + E L P SS + S P VS +++CE C + +E L + +LL + P Q++LV++ L+ Sbjct: 1858 PYLQRTMPVTDEEEEKQKKLLGVSRKDE---------DEKRVSIQSRIAISQRLQKPKLLSDMSSFKAANQGAVFEDFVRWYGNPQNPLSEEVNGETARRAAQYRSKLPPEEAKVLALEEASEAIAILMSLRAFWEDS-------WDEAEPCPAFEQEPLFDPYSTVEMVFHSFETIHPAILMEQALAVNLANARFVLEVATKPVKQVPSIKRALHHLLTSIDTAIERLTKD--AAEGCLFTSPRSSSNKSEPLVY---VSTSTITSCEEACDAIGEMEILLSRSLALLQQFPGQYKLVDSFLQ 2140
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAQ90863.1 (hypothetical protein KFL_006940020 [Klebsormidium nitens]) HSP 1 Score: 102.8 bits (255), Expect = 6.900e-18 Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0 Query: 632 LTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRF-RWPGQGRVDVD-KLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEALLEGRGERRGGREGPPWPLEGE 897 L +L L +DM AFKAANP ++L DF+RW +P W+ E+ WP QG+V + +S W +WE A +P QRPLF T EAEK+LH+L+TI P LL Q+LA AF + LL A AS+ +S L K LA S +L + + S G S+ E +C +E + A SL HKLP + +LV LL + R PP L+ E Sbjct: 717 LARLHSRMLSSDMSAFKAANPGALLEDFVRWHSPRDWLPEDSXXXXXXXXXXXXXXXXGVPGWPPQGKVSRRMQADSFW-------GELWERAEALPVTDQRPLFDHTREAEKVLHYLDTIEPQDLLPQMLATAFYSALDLLAAA---------RGASVPTVSELRK---------------ALASEMSGALDLGLLQQQTKDESTGIQSSLEALCNRFEELEALIVRAASLSHKLPGRPQLVSELLS--AVQLSNRGDPPSSLKVE 950
BLAST of NO13G00550 vs. NCBI_GenBank
Match: XP_011094487.1 (rab3 GTPase-activating protein catalytic subunit [Sesamum indicum]) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-16 Identity = 70/238 (29.41%), Postives = 106/238 (44.54%), Query Frame = 0 Query: 640 LMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQGRVD--VDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLLTQAPTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKLPNQHRLVEAL 876 L +DM AFKAANP +V DFIRW +P W + E + EE+ A + WP +GR+ + + + W + IW A P+PA +Q+PL E EK+LH+LET+ P LL Q+++ AF +L Q T L + L + + + Y+ T+ +S + + R+CV +E + A SL K LVEA+ Sbjct: 592 LASDMSAFKAANPDAVFEDFIRWHSPKDWESDCSEKLEESRTYSEEESA--YEWPPRGRLSERMSDIGNSW-------RKIWNEALPLPASEQKPLLDPNREGEKVLHYLETLRPHQLLSQMVSTAFRAAADILNQ--TSFGGLKQMTTKMGQLYITMASILKYMQSYNTTSDSEV------------------------IEDLSRLCVTFEHIEKLILLAASLHCKFLQSPHLVEAI 794
BLAST of NO13G00550 vs. NCBI_GenBank
Match: GAY06732.1 (Hypothetical protein PINS_014536, partial [Pythium insidiosum]) HSP 1 Score: 97.4 bits (241), Expect = 2.900e-16 Identity = 85/300 (28.33%), Postives = 138/300 (46.00%), Query Frame = 0 Query: 574 RRDTVVVHPVLQYGCPLTEDGVLQHRQLLNQALRGRXXXXXXXXXXXXXXXXRGLMTVLTKLIRPKLMADMEAFKAANPHSVLADFIRWQAPDAWVEEEGEGEDGGEDEMEEDCAVRFRWPGQG------RVDVDKLNSHWHLSSKQLKSIWETARPIPAVQQRPLFQETHEAEKILHFLETIPPAHLLCQVLAAAFSTVFFLL-TQA-PTPAVALPGTRASLSHLSALIKNAIAYLHEEQTSPESVLALPPSSSLSISPPPPSRRPVSQGCLSACERVCVMVAAVEDRLRCATSLLHKL 866 R + +++ P Q P TED V Q ++LL++ + + ++ L++DM++FKAANP S LADF+RW +P W+E++ G E + + + G G RV+ D+ + + HL + +WE+ P+PA +Q+ LF E+EKI H+LETI P + Q L A S+ + +L T A P PA +LP +L L A++ L + + VL P + + + AC R+ VE L +++LL L Sbjct: 260 RTNAMMMEPETQAAVPATEDIVKQQQELLSR-----------------LGVNKESAMLRQQIQSISLVSDMQSFKAANPDSCLADFVRWYSPKDWIEDKSLSGSGLPAEGKN----LWWFEGAGMLSERMRVNDDEGSKYGHLWHR----MWESCAPLPASKQKRLFDPVEESEKIYHYLETISPHEMFHQTLVGAISSCYSILETMALPFPARSLPTVATALDSLREQCNVAVSLLDDALAQSQVVLPTGPDQREEQKKAKSQLQVAFEMAIDACWRMTRGFEQVEILLSQSSALLKYL 534 The following BLAST results are available for this feature:
BLAST of NO13G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00550 ID=NO13G00550|Name=NO13G00550|organism=Nannochloropsis oceanica|type=gene|length=5484bpback to top protein sequence of NO13G00550.1 >NO13G00550.1-protein ID=NO13G00550.1-protein|Name=NO13G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1120bpback to top Synonyms
Publications
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